RNA–Protein interactions for RNA: ENST00000460563.5

HMGN2-202, Transcript of high mobility group nucleosomal binding domain 2, humanhuman

TSL 5

Gene HMGN2, Length 1,045 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN2-202ENST00000460563 BMP3P12645 472 aa12.85□□□□□ -0.35
HMGN2-202ENST00000460563 SMAD3P84022 425 aaKnown RBP12.85□□□□□ -0.35
HMGN2-202ENST00000460563 TFAP4Q01664 338 aa12.85□□□□□ -0.35
HMGN2-202ENST00000460563 PPARAQ07869 468 aa12.85□□□□□ -0.35
HMGN2-202ENST00000460563 CCDC144BQ3MJ40 725 aa12.85□□□□□ -0.35
HMGN2-202ENST00000460563 ZMYM1Q5SVZ6 1142 aa12.85□□□□□ -0.35
HMGN2-202ENST00000460563 ANKRD33Q7Z3H0 272 aa12.85□□□□□ -0.35
HMGN2-202ENST00000460563 CYP2U1Q7Z449 544 aa12.85□□□□□ -0.35
HMGN2-202ENST00000460563 CCDC144CPQ8IYA2 1237 aa12.85□□□□□ -0.35
HMGN2-202ENST00000460563 MSL3Q8N5Y2 521 aaKnown RBP12.85□□□□□ -0.35
HMGN2-202ENST00000460563 NEDD1Q8NHV4 660 aa12.85□□□□□ -0.35
HMGN2-202ENST00000460563 AGBL1Q96MI9 1066 aa12.85□□□□□ -0.35
HMGN2-202ENST00000460563 TSEN34Q9BSV6 310 aaKnown RBP12.85□□□□□ -0.35
HMGN2-202ENST00000460563 KATNBL1Q9H079 304 aa12.85□□□□□ -0.35
HMGN2-202ENST00000460563 NAPBQ9H115 298 aa12.85□□□□□ -0.35
HMGN2-202ENST00000460563 ZNF536O15090 1300 aa12.85□□□□□ -0.35
HMGN2-202ENST00000460563 TTC41PQ6P2S7 1318 aa12.85□□□□□ -0.35
HMGN2-202ENST00000460563 SPTBN5Q9NRC6 3674 aaKnown RBP12.84□□□□□ -0.35
HMGN2-202ENST00000460563 FAM187AA6NFU0 413 aa12.84□□□□□ -0.35
HMGN2-202ENST00000460563 SFI1A8K8P3 1242 aa12.84□□□□□ -0.35
HMGN2-202ENST00000460563 TMEM229AB2RXF0 380 aa12.84□□□□□ -0.35
HMGN2-202ENST00000460563 CTAGE5O15320 804 aa12.84□□□□□ -0.35
HMGN2-202ENST00000460563 ASGR1P07306 291 aa12.84□□□□□ -0.35
HMGN2-202ENST00000460563 FPGSQ05932 587 aa12.84□□□□□ -0.35
HMGN2-202ENST00000460563 KCTD1Q719H9 257 aa12.84□□□□□ -0.35
HMGN2-202ENST00000460563 CHST13Q8NET6 341 aa12.84□□□□□ -0.35
HMGN2-202ENST00000460563 MAFAQ8NHW3 353 aaPredicted RBP12.84□□□□□ -0.35
HMGN2-202ENST00000460563 NUP133Q8WUM0 1156 aa12.84□□□□□ -0.35
HMGN2-202ENST00000460563 ZNF287Q9HBT7 754 aa12.84□□□□□ -0.35
HMGN2-202ENST00000460563 RNF146Q9NTX7 359 aa12.84□□□□□ -0.35
HMGN2-202ENST00000460563 TBX21Q9UL17 535 aa12.84□□□□□ -0.35
HMGN2-202ENST00000460563 MTMR7Q9Y216 660 aa12.84□□□□□ -0.35
HMGN2-202ENST00000460563 USTQ9Y2C2 406 aa12.84□□□□□ -0.35
HMGN2-202ENST00000460563 ASTN1O14525 1302 aa12.84□□□□□ -0.35
HMGN2-202ENST00000460563 DCDC2CA8MYV0 355 aa12.83□□□□□ -0.36
HMGN2-202ENST00000460563 MCCP23508 829 aa12.83□□□□□ -0.36
HMGN2-202ENST00000460563 CST5P28325 142 aaPredicted RBP12.83□□□□□ -0.36
HMGN2-202ENST00000460563 STAT2P52630 851 aa12.83□□□□□ -0.36
HMGN2-202ENST00000460563 BEX3Q00994 111 aa12.83□□□□□ -0.36
HMGN2-202ENST00000460563 PDE4BQ07343 736 aa12.83□□□□□ -0.36
HMGN2-202ENST00000460563 IKQ13123 557 aaPredicted RBP12.83□□□□□ -0.36
HMGN2-202ENST00000460563 VPS53Q5VIR6 699 aa12.83□□□□□ -0.36
HMGN2-202ENST00000460563 CCDC174Q6PII3 467 aa12.83□□□□□ -0.36
HMGN2-202ENST00000460563 SERBP1Q8NC51 408 aaKnown RBP eCLIP12.83□□□□□ -0.365e-13■■□□□ 12.3
HMGN2-202ENST00000460563 FAM200AQ8TCP9 573 aa12.83□□□□□ -0.36
HMGN2-202ENST00000460563 NACAP1Q9BZK3 213 aa12.83□□□□□ -0.36
HMGN2-202ENST00000460563 UPF3AQ9H1J1 476 aaKnown RBP12.83□□□□□ -0.36
HMGN2-202ENST00000460563 ABHD16BQ9H3Z7 469 aa12.83□□□□□ -0.36
HMGN2-202ENST00000460563 ACAD9Q9H845 621 aa12.83□□□□□ -0.36
HMGN2-202ENST00000460563 ETNK1Q9HBU6 452 aa12.83□□□□□ -0.36
HMGN2-202ENST00000460563 A1CFQ9NQ94 594 aaKnown RBP12.83□□□□□ -0.36
HMGN2-202ENST00000460563 DDX52Q9Y2R4 599 aaKnown RBP eCLIP12.83□□□□□ -0.362e-20■■□□□ 11.6
HMGN2-202ENST00000460563 SALL3Q9BXA9 1300 aa12.83□□□□□ -0.36
HMGN2-202ENST00000460563 CUL9Q8IWT3 2517 aa12.82□□□□□ -0.36
HMGN2-202ENST00000460563 ERC2O15083 957 aa12.82□□□□□ -0.36
HMGN2-202ENST00000460563 MX1P20591 662 aa12.82□□□□□ -0.36
HMGN2-202ENST00000460563 SLC1A4P43007 532 aa12.82□□□□□ -0.36
HMGN2-202ENST00000460563 OAZ1P54368 228 aa12.82□□□□□ -0.36
HMGN2-202ENST00000460563 GJA9P57773 515 aa12.82□□□□□ -0.36
HMGN2-202ENST00000460563 MUM1L1Q5H9M0 696 aa12.82□□□□□ -0.36
HMGN2-202ENST00000460563 TMEM63BQ5T3F8 832 aa12.82□□□□□ -0.36
HMGN2-202ENST00000460563 FAM133AQ8N9E0 248 aa12.82□□□□□ -0.36
HMGN2-202ENST00000460563 GMCL1Q96IK5 515 aa12.82□□□□□ -0.36
HMGN2-202ENST00000460563 GLT1D1Q96MS3 346 aa12.82□□□□□ -0.36
HMGN2-202ENST00000460563 TOX2Q96NM4 488 aa12.82□□□□□ -0.36
HMGN2-202ENST00000460563 PURBQ96QR8 312 aaKnown RBP12.82□□□□□ -0.36
HMGN2-202ENST00000460563 BUD13Q9BRD0 619 aaKnown RBP eCLIP12.82□□□□□ -0.361e-26■□□□□ 10.2
HMGN2-202ENST00000460563 IL17RBQ9NRM6 502 aa12.82□□□□□ -0.36
HMGN2-202ENST00000460563 RAB6BQ9NRW1 208 aa12.82□□□□□ -0.36
HMGN2-202ENST00000460563 FBXO40Q9UH90 709 aa12.82□□□□□ -0.36
HMGN2-202ENST00000460563 SYNPO2Q9UMS6 1093 aa12.82□□□□□ -0.36
HMGN2-202ENST00000460563 STX8Q9UNK0 236 aa12.82□□□□□ -0.36
HMGN2-202ENST00000460563 LAMA4Q16363 1823 aa12.81□□□□□ -0.36
HMGN2-202ENST00000460563 A0A0U1RQG5 324 aaPredicted RBP12.81□□□□□ -0.36
HMGN2-202ENST00000460563 TSPY2A6NKD2 308 aa12.81□□□□□ -0.36
HMGN2-202ENST00000460563 GFRA3O60609 400 aa12.81□□□□□ -0.36
HMGN2-202ENST00000460563 TIMP1P01033 207 aa12.81□□□□□ -0.36
HMGN2-202ENST00000460563 SLC3A2P08195 630 aaKnown RBP12.81□□□□□ -0.36
HMGN2-202ENST00000460563 ALAS1P13196 640 aa12.81□□□□□ -0.36
HMGN2-202ENST00000460563 FOSL2P15408 326 aa12.81□□□□□ -0.36
HMGN2-202ENST00000460563 CDK7P50613 346 aa12.81□□□□□ -0.36
HMGN2-202ENST00000460563 GDF10P55107 478 aa12.81□□□□□ -0.36
HMGN2-202ENST00000460563 LRRFIP1Q32MZ4 808 aaKnown RBP12.81□□□□□ -0.36
HMGN2-202ENST00000460563 GNASQ5JWF2 1037 aa12.81□□□□□ -0.36
HMGN2-202ENST00000460563 C16orf59Q7L2K0 433 aa12.81□□□□□ -0.36
HMGN2-202ENST00000460563 FBXO16Q8IX29 292 aaPredicted RBP12.81□□□□□ -0.36
HMGN2-202ENST00000460563 FAM126BQ8IXS8 530 aa12.81□□□□□ -0.36
HMGN2-202ENST00000460563 MEIOBQ8N635 442 aa12.81□□□□□ -0.36
HMGN2-202ENST00000460563 STAG1Q8WVM7 1258 aa12.81□□□□□ -0.36
HMGN2-202ENST00000460563 VTI1AQ96AJ9 217 aa12.81□□□□□ -0.36
HMGN2-202ENST00000460563 TRERF1Q96PN7 1200 aa12.81□□□□□ -0.36
HMGN2-202ENST00000460563 ZNF358Q9NW07 568 aa12.81□□□□□ -0.36
HMGN2-202ENST00000460563 ELP1O95163 1332 aa12.81□□□□□ -0.36
HMGN2-202ENST00000460563 SCN5AQ14524 2016 aa12.81□□□□□ -0.36
HMGN2-202ENST00000460563 GRXCR1A8MXD5 290 aa12.8□□□□□ -0.36
HMGN2-202ENST00000460563 ARVCFO00192 962 aa12.8□□□□□ -0.36
HMGN2-202ENST00000460563 AVPP01185 164 aa12.8□□□□□ -0.36
HMGN2-202ENST00000460563 ACRP10323 421 aa12.8□□□□□ -0.36
HMGN2-202ENST00000460563 CSF2RAP15509 400 aa12.8□□□□□ -0.36
HMGN2-202ENST00000460563 SEC13P55735 322 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms