RNA–Protein interactions for RNA: ENST00000459860.1

SSNA1-202, Transcript of SS nuclear autoantigen 1, humanhuman

TSL 1 (best)

Gene SSNA1, Length 1,170 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSNA1-202ENST00000459860 ANO3Q9BYT9 981 aa24.88■■□□□ 1.57
SSNA1-202ENST00000459860 STARD7Q9NQZ5 370 aa24.88■■□□□ 1.57
SSNA1-202ENST00000459860 MTMR10Q9NXD2 777 aa24.88■■□□□ 1.57
SSNA1-202ENST00000459860 TGFB3P10600 412 aa24.87■■□□□ 1.57
SSNA1-202ENST00000459860 IRX5P78411 483 aaPredicted RBP24.87■■□□□ 1.57
SSNA1-202ENST00000459860 MRPS9P82933 396 aaKnown RBP24.87■■□□□ 1.57
SSNA1-202ENST00000459860 LY6KQ17RY6 165 aa24.87■■□□□ 1.57
SSNA1-202ENST00000459860 CCSAPQ6IQ19 270 aaPredicted RBP24.87■■□□□ 1.57
SSNA1-202ENST00000459860 COPS5Q92905 334 aa24.87■■□□□ 1.57
SSNA1-202ENST00000459860 ZFP91Q96JP5 570 aaPredicted RBP24.87■■□□□ 1.57
SSNA1-202ENST00000459860 INPP4AQ96PE3 977 aaPredicted RBP24.87■■□□□ 1.57
SSNA1-202ENST00000459860 DDX41Q9UJV9 622 aaKnown RBP24.87■■□□□ 1.57
SSNA1-202ENST00000459860 CTAGE5O15320 804 aa24.86■■□□□ 1.57
SSNA1-202ENST00000459860 FIBPO43427 364 aa24.86■■□□□ 1.57
SSNA1-202ENST00000459860 CABYRO75952 493 aa24.86■■□□□ 1.57
SSNA1-202ENST00000459860 RGS20O76081 388 aa24.86■■□□□ 1.57
SSNA1-202ENST00000459860 PTGS1P23219 599 aa24.86■■□□□ 1.57
SSNA1-202ENST00000459860 CLK2P49760 499 aaKnown RBP24.86■■□□□ 1.57
SSNA1-202ENST00000459860 JAKMIP3Q5VZ66 844 aa24.86■■□□□ 1.57
SSNA1-202ENST00000459860 SLC39A5Q6ZMH5 540 aa24.86■■□□□ 1.57
SSNA1-202ENST00000459860 VTI1AQ96AJ9 217 aa24.86■■□□□ 1.57
SSNA1-202ENST00000459860 POLR3EQ9NVU0 708 aa24.86■■□□□ 1.57
SSNA1-202ENST00000459860 RTEL1Q9NZ71 1219 aa24.86■■□□□ 1.57
SSNA1-202ENST00000459860 ORC3Q9UBD5 711 aaPredicted RBP24.86■■□□□ 1.57
SSNA1-202ENST00000459860 RTP1P59025 263 aa24.85■■□□□ 1.57
SSNA1-202ENST00000459860 DHX37Q8IY37 1157 aaKnown RBP24.85■■□□□ 1.57
SSNA1-202ENST00000459860 CDHR1Q96JP9 859 aa24.85■■□□□ 1.57
SSNA1-202ENST00000459860 PGBD1Q96JS3 809 aa24.85■■□□□ 1.57
SSNA1-202ENST00000459860 SH2B1Q9NRF2 756 aaPredicted RBP24.85■■□□□ 1.57
SSNA1-202ENST00000459860 TMEM260Q9NX78 707 aa24.85■■□□□ 1.57
SSNA1-202ENST00000459860 A0A0C4DFX4 3053 aa24.85■■□□□ 1.57
SSNA1-202ENST00000459860 ELP1O95163 1332 aa24.85■■□□□ 1.57
SSNA1-202ENST00000459860 LAMC2Q13753 1193 aa24.84■■□□□ 1.57
SSNA1-202ENST00000459860 STXBP5LQ9Y2K9 1186 aa24.84■■□□□ 1.57
SSNA1-202ENST00000459860 KPNA6O60684 536 aa24.83■■□□□ 1.57
SSNA1-202ENST00000459860 MYL3P08590 195 aa24.83■■□□□ 1.57
SSNA1-202ENST00000459860 ICAM3P32942 547 aa24.83■■□□□ 1.57
SSNA1-202ENST00000459860 SREBF1P36956 1147 aa24.83■■□□□ 1.57
SSNA1-202ENST00000459860 ARHGAP1Q07960 439 aa24.83■■□□□ 1.57
SSNA1-202ENST00000459860 SNX17Q15036 470 aa24.83■■□□□ 1.57
SSNA1-202ENST00000459860 GALNT17Q6IS24 598 aa24.83■■□□□ 1.57
SSNA1-202ENST00000459860 CXCL17Q6UXB2 119 aa24.83■■□□□ 1.57
SSNA1-202ENST00000459860 GPRASP2Q96D09 838 aa24.83■■□□□ 1.57
SSNA1-202ENST00000459860 ATP11BQ9Y2G3 1177 aa24.83■■□□□ 1.57
SSNA1-202ENST00000459860 A0A0U1RQG5 324 aaPredicted RBP24.82■■□□□ 1.56
SSNA1-202ENST00000459860 A6NJR5 290 aa24.82■■□□□ 1.56
SSNA1-202ENST00000459860 CTDNEP1O95476 244 aa24.82■■□□□ 1.56
SSNA1-202ENST00000459860 GGPS1O95749 300 aa24.82■■□□□ 1.56
SSNA1-202ENST00000459860 UBA1P22314 1058 aaKnown RBP24.82■■□□□ 1.56
SSNA1-202ENST00000459860 ZNF76P36508 570 aa24.82■■□□□ 1.56
SSNA1-202ENST00000459860 NEDD9Q14511 834 aa24.82■■□□□ 1.56
SSNA1-202ENST00000459860 C1orf53Q5VUE5 145 aa24.82■■□□□ 1.56
SSNA1-202ENST00000459860 CCDC83Q8IWF9 413 aa24.82■■□□□ 1.56
SSNA1-202ENST00000459860 NSUN7Q8NE18 718 aaKnown RBP24.82■■□□□ 1.56
SSNA1-202ENST00000459860 EMID1Q96A84 441 aaPredicted RBP24.82■■□□□ 1.56
SSNA1-202ENST00000459860 MLXIPQ9HAP2 919 aa24.82■■□□□ 1.56
SSNA1-202ENST00000459860 PCDHA4Q9UN74 947 aa24.82■■□□□ 1.56
SSNA1-202ENST00000459860 DOCK5Q9H7D0 1870 aa24.81■■□□□ 1.56
SSNA1-202ENST00000459860 SPATA31C2B4DYI2 1134 aa24.81■■□□□ 1.56
SSNA1-202ENST00000459860 DLL1O00548 723 aa24.81■■□□□ 1.56
SSNA1-202ENST00000459860 ARHGAP4P98171 946 aa24.81■■□□□ 1.56
SSNA1-202ENST00000459860 MTMR1Q13613 665 aa24.81■■□□□ 1.56
SSNA1-202ENST00000459860 GIMAP8Q8ND71 665 aaPredicted RBP24.81■■□□□ 1.56
SSNA1-202ENST00000459860 AFG1LQ8WV93 481 aa24.81■■□□□ 1.56
SSNA1-202ENST00000459860 AIFM3Q96NN9 605 aa24.81■■□□□ 1.56
SSNA1-202ENST00000459860 LBHD1Q9BQE6 289 aaPredicted RBP24.81■■□□□ 1.56
SSNA1-202ENST00000459860 ALG1Q9BT22 464 aa24.81■■□□□ 1.56
SSNA1-202ENST00000459860 UBIAD1Q9Y5Z9 338 aa24.81■■□□□ 1.56
SSNA1-202ENST00000459860 MROH7Q68CQ1 1323 aa24.81■■□□□ 1.56
SSNA1-202ENST00000459860 MMP3P08254 477 aa24.8■■□□□ 1.56
SSNA1-202ENST00000459860 MCM2P49736 904 aa24.8■■□□□ 1.56
SSNA1-202ENST00000459860 TRIM60Q495X7 471 aa24.8■■□□□ 1.56
SSNA1-202ENST00000459860 CELF3Q5SZQ8 465 aaKnown RBP24.8■■□□□ 1.56
SSNA1-202ENST00000459860 BLIDQ8IZY5 108 aa24.8■■□□□ 1.56
SSNA1-202ENST00000459860 PPTC7Q8NI37 304 aa24.8■■□□□ 1.56
SSNA1-202ENST00000459860 SPATA33Q96N06 139 aa24.8■■□□□ 1.56
SSNA1-202ENST00000459860 LLPHQ9BRT6 129 aaKnown RBP24.8■■□□□ 1.56
SSNA1-202ENST00000459860 MTG1Q9BT17 334 aaPredicted RBP24.8■■□□□ 1.56
SSNA1-202ENST00000459860 MAFGO15525 162 aa24.79■■□□□ 1.56
SSNA1-202ENST00000459860 ITGB5P18084 799 aa24.79■■□□□ 1.56
SSNA1-202ENST00000459860 PURAQ00577 322 aaKnown RBP24.79■■□□□ 1.56
SSNA1-202ENST00000459860 TRIM29Q14134 588 aa24.79■■□□□ 1.56
SSNA1-202ENST00000459860 DGKDQ16760 1214 aa24.79■■□□□ 1.56
SSNA1-202ENST00000459860 MYSM1Q5VVJ2 828 aa24.79■■□□□ 1.56
SSNA1-202ENST00000459860 DAGLBQ8NCG7 672 aa24.79■■□□□ 1.56
SSNA1-202ENST00000459860 RASGRP4Q8TDF6 673 aa24.79■■□□□ 1.56
SSNA1-202ENST00000459860 SENP7Q9BQF6 1050 aa24.79■■□□□ 1.56
SSNA1-202ENST00000459860 MXRA8Q9BRK3 442 aa24.79■■□□□ 1.56
SSNA1-202ENST00000459860 SEZ6LQ9BYH1 1024 aa24.79■■□□□ 1.56
SSNA1-202ENST00000459860 JADE2Q9NQC1 790 aa24.79■■□□□ 1.56
SSNA1-202ENST00000459860 PRKAG2Q9UGJ0 569 aa24.79■■□□□ 1.56
SSNA1-202ENST00000459860 LAMA2P24043 3122 aaKnown RBP24.79■■□□□ 1.56
SSNA1-202ENST00000459860 NOP56O00567 594 aaKnown RBP24.78■■□□□ 1.56
SSNA1-202ENST00000459860 SORBS3O60504 671 aa24.78■■□□□ 1.56
SSNA1-202ENST00000459860 SP2Q02086 613 aa24.78■■□□□ 1.56
SSNA1-202ENST00000459860 SEMA3FQ13275 785 aa24.78■■□□□ 1.56
SSNA1-202ENST00000459860 CEP55Q53EZ4 464 aa24.78■■□□□ 1.56
SSNA1-202ENST00000459860 FAM109BQ6ICB4 259 aaPredicted RBP24.78■■□□□ 1.56
SSNA1-202ENST00000459860 BRMS1Q9HCU9 246 aa24.78■■□□□ 1.56
SSNA1-202ENST00000459860 JAK2O60674 1132 aa24.77■■□□□ 1.56
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms