RNA–Protein interactions for RNA: ENST00000459274.1

RNU1-88P-201, Transcript of RNA, U1 small nuclear 88, pseudogene, humanhuman

BASIC

Gene RNU1-88P, Length 128 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU1-88P-201ENST00000459274 MUTP22033 750 aa6.55□□□□□ -1.36
RNU1-88P-201ENST00000459274 SFNP31947 248 aa6.55□□□□□ -1.36
RNU1-88P-201ENST00000459274 CIITAP33076 1130 aa6.55□□□□□ -1.36
RNU1-88P-201ENST00000459274 AFMP43652 599 aa6.55□□□□□ -1.36
RNU1-88P-201ENST00000459274 CLCN6P51797 869 aa6.55□□□□□ -1.36
RNU1-88P-201ENST00000459274 JAK3P52333 1124 aa6.55□□□□□ -1.36
RNU1-88P-201ENST00000459274 ERVK-9P63128 1117 aa6.55□□□□□ -1.36
RNU1-88P-201ENST00000459274 ERVK-24P63145 666 aa6.55□□□□□ -1.36
RNU1-88P-201ENST00000459274 KRT76Q01546 638 aa6.55□□□□□ -1.36
RNU1-88P-201ENST00000459274 NOGQ13253 232 aa6.55□□□□□ -1.36
RNU1-88P-201ENST00000459274 TMEM132BQ14DG7 1078 aa6.55□□□□□ -1.36
RNU1-88P-201ENST00000459274 PGM5Q15124 567 aa6.55□□□□□ -1.36
RNU1-88P-201ENST00000459274 NPY5RQ15761 445 aa6.55□□□□□ -1.36
RNU1-88P-201ENST00000459274 DEFB115Q30KQ5 88 aa6.55□□□□□ -1.36
RNU1-88P-201ENST00000459274 SPECC1Q5M775 1068 aa6.55□□□□□ -1.36
RNU1-88P-201ENST00000459274 NCAPH2Q6IBW4 605 aa6.55□□□□□ -1.36
RNU1-88P-201ENST00000459274 KRBA2Q6ZNG9 492 aa6.55□□□□□ -1.36
RNU1-88P-201ENST00000459274 STXBP4Q6ZWJ1 553 aa6.55□□□□□ -1.36
RNU1-88P-201ENST00000459274 OTUD6AQ7L8S5 288 aa6.55□□□□□ -1.36
RNU1-88P-201ENST00000459274 MIER3Q7Z3K6 550 aa6.55□□□□□ -1.36
RNU1-88P-201ENST00000459274 FMR1NBQ8N0W7 255 aaPredicted RBP6.55□□□□□ -1.36
RNU1-88P-201ENST00000459274 ANKRD13CQ8N6S4 541 aa6.55□□□□□ -1.36
RNU1-88P-201ENST00000459274 TRIML1Q8N9V2 468 aa6.55□□□□□ -1.36
RNU1-88P-201ENST00000459274 NEK9Q8TD19 979 aa6.55□□□□□ -1.36
RNU1-88P-201ENST00000459274 GPRASP2Q96D09 838 aa6.55□□□□□ -1.36
RNU1-88P-201ENST00000459274 CHAMP1Q96JM3 812 aa6.55□□□□□ -1.36
RNU1-88P-201ENST00000459274 GSDMAQ96QA5 445 aa6.55□□□□□ -1.36
RNU1-88P-201ENST00000459274 MXRA8Q9BRK3 442 aa6.55□□□□□ -1.36
RNU1-88P-201ENST00000459274 PXMP2Q9NR77 195 aa6.55□□□□□ -1.36
RNU1-88P-201ENST00000459274 KCNG1Q9UIX4 513 aa6.55□□□□□ -1.36
RNU1-88P-201ENST00000459274 SSC5DA1L4H1 1573 aa6.55□□□□□ -1.36
RNU1-88P-201ENST00000459274 MYH11P35749 1972 aa6.55□□□□□ -1.36
RNU1-88P-201ENST00000459274 ZNF536O15090 1300 aa6.54□□□□□ -1.36
RNU1-88P-201ENST00000459274 KAT6AQ92794 2004 aa6.54□□□□□ -1.36
RNU1-88P-201ENST00000459274 BTBD19C9JJ37 291 aa6.54□□□□□ -1.36
RNU1-88P-201ENST00000459274 NOP56O00567 594 aaKnown RBP6.54□□□□□ -1.36
RNU1-88P-201ENST00000459274 TDP2O95551 362 aa6.54□□□□□ -1.36
RNU1-88P-201ENST00000459274 FGFR1OPO95684 399 aaKnown RBP6.54□□□□□ -1.36
RNU1-88P-201ENST00000459274 PSAPP07602 524 aa6.54□□□□□ -1.36
RNU1-88P-201ENST00000459274 TGFB3P10600 412 aa6.54□□□□□ -1.36
RNU1-88P-201ENST00000459274 LIG1P18858 919 aa6.54□□□□□ -1.36
RNU1-88P-201ENST00000459274 CDK11BP21127 795 aaKnown RBP6.54□□□□□ -1.36
RNU1-88P-201ENST00000459274 HOXD10P28358 340 aa6.54□□□□□ -1.36
RNU1-88P-201ENST00000459274 ZNF445P59923 1031 aa6.54□□□□□ -1.36
RNU1-88P-201ENST00000459274 UBXN2AP68543 259 aa6.54□□□□□ -1.36
RNU1-88P-201ENST00000459274 NEDD9Q14511 834 aa6.54□□□□□ -1.36
RNU1-88P-201ENST00000459274 POSTNQ15063 836 aa6.54□□□□□ -1.36
RNU1-88P-201ENST00000459274 SLC35G1Q2M3R5 365 aa6.54□□□□□ -1.36
RNU1-88P-201ENST00000459274 UVSSAQ2YD98 709 aa6.54□□□□□ -1.36
RNU1-88P-201ENST00000459274 BRDTQ58F21 947 aaPredicted RBP6.54□□□□□ -1.36
RNU1-88P-201ENST00000459274 MUM1L1Q5H9M0 696 aa6.54□□□□□ -1.36
RNU1-88P-201ENST00000459274 EARS2Q5JPH6 523 aaKnown RBP6.54□□□□□ -1.36
RNU1-88P-201ENST00000459274 CT47A1Q5JQC4 288 aaPredicted RBP6.54□□□□□ -1.36
RNU1-88P-201ENST00000459274 AXDND1Q5T1B0 1012 aaPredicted RBP6.54□□□□□ -1.36
RNU1-88P-201ENST00000459274 SHC4Q6S5L8 630 aa6.54□□□□□ -1.36
RNU1-88P-201ENST00000459274 DLK2Q6UY11 383 aa6.54□□□□□ -1.36
RNU1-88P-201ENST00000459274 SAPCD2Q86UD0 394 aa6.54□□□□□ -1.36
RNU1-88P-201ENST00000459274 TPH2Q8IWU9 490 aa6.54□□□□□ -1.36
RNU1-88P-201ENST00000459274 CKAP2LQ8IYA6 745 aa6.54□□□□□ -1.36
RNU1-88P-201ENST00000459274 EXOC8Q8IYI6 725 aa6.54□□□□□ -1.36
RNU1-88P-201ENST00000459274 SYTL5Q8TDW5 730 aaPredicted RBP6.54□□□□□ -1.36
RNU1-88P-201ENST00000459274 ATP6V0A1Q93050 837 aa6.54□□□□□ -1.36
RNU1-88P-201ENST00000459274 TRIM44Q96DX7 344 aaPredicted RBP6.54□□□□□ -1.36
RNU1-88P-201ENST00000459274 EPSTI1Q96J88 318 aa6.54□□□□□ -1.36
RNU1-88P-201ENST00000459274 TAAR1Q96RJ0 339 aa6.54□□□□□ -1.36
RNU1-88P-201ENST00000459274 MOV10L1Q9BXT6 1211 aaKnown RBP6.54□□□□□ -1.36
RNU1-88P-201ENST00000459274 AZI2Q9H6S1 392 aa6.54□□□□□ -1.36
RNU1-88P-201ENST00000459274 MLXIPQ9HAP2 919 aa6.54□□□□□ -1.36
RNU1-88P-201ENST00000459274 JADE2Q9NQC1 790 aa6.54□□□□□ -1.36
RNU1-88P-201ENST00000459274 DISC1Q9NRI5 854 aa6.54□□□□□ -1.36
RNU1-88P-201ENST00000459274 EXOC1Q9NV70 894 aa6.54□□□□□ -1.36
RNU1-88P-201ENST00000459274 CYP39A1Q9NYL5 469 aa6.54□□□□□ -1.36
RNU1-88P-201ENST00000459274 TMEM63CQ9P1W3 806 aa6.54□□□□□ -1.36
RNU1-88P-201ENST00000459274 KIAA1468Q9P260 1216 aa6.54□□□□□ -1.36
RNU1-88P-201ENST00000459274 SERTAD1Q9UHV2 236 aa6.54□□□□□ -1.36
RNU1-88P-201ENST00000459274 ZNF214Q9UL59 606 aaPredicted RBP6.54□□□□□ -1.36
RNU1-88P-201ENST00000459274 TLL2Q9Y6L7 1015 aa6.54□□□□□ -1.36
RNU1-88P-201ENST00000459274 PLXNA1Q9UIW2 1896 aa6.53□□□□□ -1.36
RNU1-88P-201ENST00000459274 MEIS1O00470 390 aa6.53□□□□□ -1.36
RNU1-88P-201ENST00000459274 BACH1O14867 736 aa6.53□□□□□ -1.36
RNU1-88P-201ENST00000459274 CHMP2AO43633 222 aa6.53□□□□□ -1.36
RNU1-88P-201ENST00000459274 GTPBP6O43824 516 aaPredicted RBP6.53□□□□□ -1.36
RNU1-88P-201ENST00000459274 NRDCO43847 1150 aa6.53□□□□□ -1.36
RNU1-88P-201ENST00000459274 TBCAO75347 108 aaKnown RBP6.53□□□□□ -1.36
RNU1-88P-201ENST00000459274 IDEP14735 1019 aa6.53□□□□□ -1.36
RNU1-88P-201ENST00000459274 ZNF165P49910 485 aa6.53□□□□□ -1.36
RNU1-88P-201ENST00000459274 DGKZQ13574 1117 aa6.53□□□□□ -1.36
RNU1-88P-201ENST00000459274 DHX8Q14562 1220 aaKnown RBP6.53□□□□□ -1.36
RNU1-88P-201ENST00000459274 TTLL4Q14679 1199 aa6.53□□□□□ -1.36
RNU1-88P-201ENST00000459274 KARSQ15046 597 aaKnown RBP6.53□□□□□ -1.36
RNU1-88P-201ENST00000459274 FAM110CQ1W6H9 321 aa6.53□□□□□ -1.36
RNU1-88P-201ENST00000459274 LONRF3Q496Y0 759 aa6.53□□□□□ -1.36
RNU1-88P-201ENST00000459274 FAM160B1Q5W0V3 765 aa6.53□□□□□ -1.36
RNU1-88P-201ENST00000459274 CST9Q5W186 159 aa6.53□□□□□ -1.36
RNU1-88P-201ENST00000459274 MIS18BP1Q6P0N0 1132 aa6.53□□□□□ -1.36
RNU1-88P-201ENST00000459274 CNNM4Q6P4Q7 775 aa6.53□□□□□ -1.36
RNU1-88P-201ENST00000459274 SEPT14Q6ZU15 432 aa6.53□□□□□ -1.36
RNU1-88P-201ENST00000459274 PLEKHH3Q7Z736 793 aa6.53□□□□□ -1.36
RNU1-88P-201ENST00000459274 IFNL1Q8IU54 200 aa6.53□□□□□ -1.36
RNU1-88P-201ENST00000459274 CCDC65Q8IXS2 484 aa6.53□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms