RNA–Protein interactions for RNA: ENST00000458893.1

SNORD42B-201, Transcript of small nucleolar RNA, C/D box 42B, humanhuman

BASIC

Gene SNORD42B, Length 67 nt, Biotype snoRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD42B-201ENST00000458893 BPNT1O95861 308 aa0.84□□□□□ -2.27
SNORD42B-201ENST00000458893 STAT5AP42229 794 aa0.84□□□□□ -2.27
SNORD42B-201ENST00000458893 AVPR1BP47901 424 aa0.84□□□□□ -2.27
SNORD42B-201ENST00000458893 CLK3P49761 638 aaKnown RBP0.84□□□□□ -2.27
SNORD42B-201ENST00000458893 POLGP54098 1239 aaPredicted RBP0.84□□□□□ -2.27
SNORD42B-201ENST00000458893 RPL6Q02878 288 aaKnown RBP0.84□□□□□ -2.27
SNORD42B-201ENST00000458893 FOXL1Q12952 345 aa0.84□□□□□ -2.27
SNORD42B-201ENST00000458893 SNW1Q13573 536 aaKnown RBP0.84□□□□□ -2.27
SNORD42B-201ENST00000458893 SEPT6Q14141 434 aa0.84□□□□□ -2.27
SNORD42B-201ENST00000458893 PCOLCEQ15113 449 aa0.84□□□□□ -2.27
SNORD42B-201ENST00000458893 TSNAXIP1Q2TAA8 658 aa0.84□□□□□ -2.27
SNORD42B-201ENST00000458893 KRT71Q3SY84 523 aa0.84□□□□□ -2.27
SNORD42B-201ENST00000458893 MIDNQ504T8 468 aa0.84□□□□□ -2.27
SNORD42B-201ENST00000458893 ZNF628Q5EBL2 1059 aa0.84□□□□□ -2.27
SNORD42B-201ENST00000458893 ZMAT1Q5H9K5 638 aa0.84□□□□□ -2.27
SNORD42B-201ENST00000458893 NBPF12Q5TAG4 269 aaPredicted RBP0.84□□□□□ -2.27
SNORD42B-201ENST00000458893 Q6ZTC4 211 aa0.84□□□□□ -2.27
SNORD42B-201ENST00000458893 MILR1Q7Z6M3 343 aa0.84□□□□□ -2.27
SNORD42B-201ENST00000458893 ADGRE4PQ86SQ3 457 aa0.84□□□□□ -2.27
SNORD42B-201ENST00000458893 MIB1Q86YT6 1006 aa0.84□□□□□ -2.27
SNORD42B-201ENST00000458893 REXO1L1PQ8IX06 675 aa0.84□□□□□ -2.27
SNORD42B-201ENST00000458893 FAM126BQ8IXS8 530 aa0.84□□□□□ -2.27
SNORD42B-201ENST00000458893 RETREG2Q8NC44 543 aa0.84□□□□□ -2.27
SNORD42B-201ENST00000458893 NUDT10Q8NFP7 164 aa0.84□□□□□ -2.27
SNORD42B-201ENST00000458893 ZNF384Q8TF68 577 aa0.84□□□□□ -2.27
SNORD42B-201ENST00000458893 CAVIN3Q969G5 261 aa0.84□□□□□ -2.27
SNORD42B-201ENST00000458893 NUDT11Q96G61 164 aa0.84□□□□□ -2.27
SNORD42B-201ENST00000458893 PTCHD1Q96NR3 888 aa0.84□□□□□ -2.27
SNORD42B-201ENST00000458893 DPYSL5Q9BPU6 564 aa0.84□□□□□ -2.27
SNORD42B-201ENST00000458893 NIF3L1Q9GZT8 377 aa0.84□□□□□ -2.27
SNORD42B-201ENST00000458893 MKRN2Q9H000 416 aaKnown RBP0.84□□□□□ -2.27
SNORD42B-201ENST00000458893 MIR1-1HGQ9H1L0 117 aa0.84□□□□□ -2.27
SNORD42B-201ENST00000458893 MSL2Q9HCI7 577 aa0.84□□□□□ -2.27
SNORD42B-201ENST00000458893 GFOD1Q9NXC2 390 aa0.84□□□□□ -2.27
SNORD42B-201ENST00000458893 PLA2G3Q9NZ20 509 aa0.84□□□□□ -2.27
SNORD42B-201ENST00000458893 ZNF70Q9UC06 446 aaPredicted RBP0.84□□□□□ -2.27
SNORD42B-201ENST00000458893 PUF60Q9UHX1 559 aaKnown RBP0.84□□□□□ -2.27
SNORD42B-201ENST00000458893 SIT1Q9Y3P8 196 aa0.84□□□□□ -2.27
SNORD42B-201ENST00000458893 NR2E1Q9Y466 385 aa0.84□□□□□ -2.27
SNORD42B-201ENST00000458893 LRP12Q9Y561 859 aa0.84□□□□□ -2.27
SNORD42B-201ENST00000458893 CCDC187A0A096LP49 1063 aa0.83□□□□□ -2.28
SNORD42B-201ENST00000458893 CHURC1-FNTBB4DL54 471 aa0.83□□□□□ -2.28
SNORD42B-201ENST00000458893 INSIG1O15503 277 aa0.83□□□□□ -2.28
SNORD42B-201ENST00000458893 FGF10O15520 208 aaPredicted RBP0.83□□□□□ -2.28
SNORD42B-201ENST00000458893 GAS8-AS1O95177 125 aa0.83□□□□□ -2.28
SNORD42B-201ENST00000458893 ABL1P00519 1130 aa0.83□□□□□ -2.28
SNORD42B-201ENST00000458893 NTRK1P04629 796 aa0.83□□□□□ -2.28
SNORD42B-201ENST00000458893 ITGB1P05556 798 aa0.83□□□□□ -2.28
SNORD42B-201ENST00000458893 CELA3AP09093 270 aa0.83□□□□□ -2.28
SNORD42B-201ENST00000458893 RAG1P15918 1043 aa0.83□□□□□ -2.28
SNORD42B-201ENST00000458893 CXCR5P32302 372 aa0.83□□□□□ -2.28
SNORD42B-201ENST00000458893 CSF2RBP32927 897 aa0.83□□□□□ -2.28
SNORD42B-201ENST00000458893 RAPGEF1Q13905 1077 aa0.83□□□□□ -2.28
SNORD42B-201ENST00000458893 SRSF7Q16629 238 aaKnown RBP eCLIP0.83□□□□□ -2.28
SNORD42B-201ENST00000458893 RTP2Q5QGT7 225 aa0.83□□□□□ -2.28
SNORD42B-201ENST00000458893 TMEM201Q5SNT2 666 aa0.83□□□□□ -2.28
SNORD42B-201ENST00000458893 NBPF6Q5VWK0 638 aa0.83□□□□□ -2.28
SNORD42B-201ENST00000458893 KIAA1614Q5VZ46 1190 aa0.83□□□□□ -2.28
SNORD42B-201ENST00000458893 BSPRYQ5W0U4 402 aa0.83□□□□□ -2.28
SNORD42B-201ENST00000458893 HEATR6Q6AI08 1181 aaKnown RBP0.83□□□□□ -2.28
SNORD42B-201ENST00000458893 KIAA1161Q6NSJ0 714 aa0.83□□□□□ -2.28
SNORD42B-201ENST00000458893 ANKRD35Q8N283 1001 aa0.83□□□□□ -2.28
SNORD42B-201ENST00000458893 LCORLQ8N3X6 602 aa0.83□□□□□ -2.28
SNORD42B-201ENST00000458893 ZNF276Q8N554 614 aa0.83□□□□□ -2.28
SNORD42B-201ENST00000458893 DTX3Q8N9I9 347 aa0.83□□□□□ -2.28
SNORD42B-201ENST00000458893 PDPRQ8NCN5 879 aa0.83□□□□□ -2.28
SNORD42B-201ENST00000458893 BEND2Q8NDZ0 799 aa0.83□□□□□ -2.28
SNORD42B-201ENST00000458893 CAGE1Q8TC20 777 aa0.83□□□□□ -2.28
SNORD42B-201ENST00000458893 SEC14L1Q92503 715 aa0.83□□□□□ -2.28
SNORD42B-201ENST00000458893 JARID2Q92833 1246 aaPredicted RBP0.83□□□□□ -2.28
SNORD42B-201ENST00000458893 LENG9Q96B70 501 aa0.83□□□□□ -2.28
SNORD42B-201ENST00000458893 TOE1Q96GM8 510 aaKnown RBP0.83□□□□□ -2.28
SNORD42B-201ENST00000458893 AJUBAQ96IF1 538 aa0.83□□□□□ -2.28
SNORD42B-201ENST00000458893 C16orf92Q96LL3 132 aa0.83□□□□□ -2.28
SNORD42B-201ENST00000458893 NBPF4Q96M43 638 aa0.83□□□□□ -2.28
SNORD42B-201ENST00000458893 CARD11Q9BXL7 1154 aa0.83□□□□□ -2.28
SNORD42B-201ENST00000458893 SRCIN1Q9C0H9 1055 aa0.83□□□□□ -2.28
SNORD42B-201ENST00000458893 NELFAQ9H3P2 528 aa0.83□□□□□ -2.28
SNORD42B-201ENST00000458893 KIAA1586Q9HCI6 787 aa0.83□□□□□ -2.28
SNORD42B-201ENST00000458893 ZMIZ1Q9ULJ6 1067 aa0.83□□□□□ -2.28
SNORD42B-201ENST00000458893 FZD1Q9UP38 647 aa0.83□□□□□ -2.28
SNORD42B-201ENST00000458893 CORINQ9Y5Q5 1042 aa0.83□□□□□ -2.28
SNORD42B-201ENST00000458893 NOTCH2Q04721 2471 aa0.83□□□□□ -2.28
SNORD42B-201ENST00000458893 IGKV2D-30A0A075B6S6 120 aa0.82□□□□□ -2.28
SNORD42B-201ENST00000458893 GRID2IPA4D2P6 1211 aa0.82□□□□□ -2.28
SNORD42B-201ENST00000458893 RGS13O14921 159 aa0.82□□□□□ -2.28
SNORD42B-201ENST00000458893 FAM20BO75063 409 aa0.82□□□□□ -2.28
SNORD42B-201ENST00000458893 CLEC3AO75596 197 aa0.82□□□□□ -2.28
SNORD42B-201ENST00000458893 FUCA1P04066 466 aa0.82□□□□□ -2.28
SNORD42B-201ENST00000458893 CHGBP05060 677 aa0.82□□□□□ -2.28
SNORD42B-201ENST00000458893 TNFRSF1BP20333 461 aa0.82□□□□□ -2.28
SNORD42B-201ENST00000458893 CCKARP32238 428 aa0.82□□□□□ -2.28
SNORD42B-201ENST00000458893 CTSKP43235 329 aa0.82□□□□□ -2.28
SNORD42B-201ENST00000458893 PTH2RP49190 550 aa0.82□□□□□ -2.28
SNORD42B-201ENST00000458893 MAN2A2P49641 1150 aa0.82□□□□□ -2.28
SNORD42B-201ENST00000458893 FOXG1P55316 489 aaPredicted RBP0.82□□□□□ -2.28
SNORD42B-201ENST00000458893 RPS26P62854 115 aaKnown RBP0.82□□□□□ -2.28
SNORD42B-201ENST00000458893 SLC25A3Q00325 362 aa0.82□□□□□ -2.28
SNORD42B-201ENST00000458893 SMAD2Q15796 467 aaKnown RBP0.82□□□□□ -2.28
SNORD42B-201ENST00000458893 VPS72Q15906 364 aa0.82□□□□□ -2.28
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms