RNA–Protein interactions for RNA: ENST00000458610.6

CD28-203, Transcript of CD28 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD28, Length 705 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD28-203ENST00000458610 GALNT17Q6IS24 598 aa18.47■□□□□ 0.55
CD28-203ENST00000458610 ANKRD33Q7Z3H0 272 aa18.47■□□□□ 0.55
CD28-203ENST00000458610 REXO1Q8N1G1 1221 aaKnown RBP18.47■□□□□ 0.55
CD28-203ENST00000458610 AFG1LQ8WV93 481 aa18.47■□□□□ 0.55
CD28-203ENST00000458610 LBHD1Q9BQE6 289 aaPredicted RBP18.47■□□□□ 0.55
CD28-203ENST00000458610 SENP7Q9BQF6 1050 aa18.47■□□□□ 0.55
CD28-203ENST00000458610 ANO3Q9BYT9 981 aa18.47■□□□□ 0.55
CD28-203ENST00000458610 ZMYND8Q9ULU4 1186 aaPredicted RBP18.47■□□□□ 0.55
CD28-203ENST00000458610 LIMCH1Q9UPQ0 1083 aa18.47■□□□□ 0.55
CD28-203ENST00000458610 LRRC37A2A6NM11 1700 aa18.46■□□□□ 0.55
CD28-203ENST00000458610 PQBP1O60828 265 aaKnown RBP18.46■□□□□ 0.55
CD28-203ENST00000458610 PPFIA4O75335 1185 aa18.46■□□□□ 0.55
CD28-203ENST00000458610 GGPS1O95749 300 aa18.46■□□□□ 0.55
CD28-203ENST00000458610 ZNF76P36508 570 aa18.46■□□□□ 0.55
CD28-203ENST00000458610 CDK7P50613 346 aa18.46■□□□□ 0.55
CD28-203ENST00000458610 PURAQ00577 322 aaKnown RBP18.46■□□□□ 0.55
CD28-203ENST00000458610 MYSM1Q5VVJ2 828 aa18.46■□□□□ 0.55
CD28-203ENST00000458610 PPTC7Q8NI37 304 aa18.46■□□□□ 0.55
CD28-203ENST00000458610 ZSCAN31Q96LW9 406 aaPredicted RBP18.46■□□□□ 0.55
CD28-203ENST00000458610 SPATA33Q96N06 139 aa18.46■□□□□ 0.55
CD28-203ENST00000458610 MMP3P08254 477 aa18.45■□□□□ 0.54
CD28-203ENST00000458610 CLTBP09497 229 aa18.45■□□□□ 0.54
CD28-203ENST00000458610 PTGS1P23219 599 aa18.45■□□□□ 0.54
CD28-203ENST00000458610 CLK2P49760 499 aaKnown RBP18.45■□□□□ 0.54
CD28-203ENST00000458610 RABEP1Q15276 862 aa18.45■□□□□ 0.54
CD28-203ENST00000458610 JAKMIP3Q5VZ66 844 aa18.45■□□□□ 0.54
CD28-203ENST00000458610 SLC43A3Q8NBI5 491 aa18.45■□□□□ 0.54
CD28-203ENST00000458610 ZFP91Q96JP5 570 aaPredicted RBP18.45■□□□□ 0.54
CD28-203ENST00000458610 JADE2Q9NQC1 790 aa18.45■□□□□ 0.54
CD28-203ENST00000458610 VPS54Q9P1Q0 977 aa18.45■□□□□ 0.54
CD28-203ENST00000458610 UBIAD1Q9Y5Z9 338 aa18.45■□□□□ 0.54
CD28-203ENST00000458610 STK36Q9NRP7 1315 aa18.45■□□□□ 0.54
CD28-203ENST00000458610 NOP56O00567 594 aaKnown RBP18.44■□□□□ 0.54
CD28-203ENST00000458610 PPFIA3O75145 1194 aa18.44■□□□□ 0.54
CD28-203ENST00000458610 SYN1P17600 705 aa18.44■□□□□ 0.54
CD28-203ENST00000458610 UBA1P22314 1058 aaKnown RBP18.44■□□□□ 0.54
CD28-203ENST00000458610 SREBF1P36956 1147 aa18.44■□□□□ 0.54
CD28-203ENST00000458610 PTPN11Q06124 597 aaPredicted RBP18.44■□□□□ 0.54
CD28-203ENST00000458610 MTMR1Q13613 665 aa18.44■□□□□ 0.54
CD28-203ENST00000458610 ME3Q16798 604 aa18.44■□□□□ 0.54
CD28-203ENST00000458610 GTF3C6Q969F1 213 aa18.44■□□□□ 0.54
CD28-203ENST00000458610 MXRA8Q9BRK3 442 aa18.44■□□□□ 0.54
CD28-203ENST00000458610 KATNAL1Q9BW62 490 aa18.44■□□□□ 0.54
CD28-203ENST00000458610 PRDM5Q9NQX1 630 aaPredicted RBP18.44■□□□□ 0.54
CD28-203ENST00000458610 TMEM39AQ9NV64 488 aa18.44■□□□□ 0.54
CD28-203ENST00000458610 TMEM260Q9NX78 707 aa18.44■□□□□ 0.54
CD28-203ENST00000458610 ST18O60284 1047 aa18.43■□□□□ 0.54
CD28-203ENST00000458610 SUPT20HL2P0C7V6 817 aa18.43■□□□□ 0.54
CD28-203ENST00000458610 SP2Q02086 613 aa18.43■□□□□ 0.54
CD28-203ENST00000458610 METTL7BQ6UX53 244 aa18.43■□□□□ 0.54
CD28-203ENST00000458610 ORC3Q9UBD5 711 aaPredicted RBP18.43■□□□□ 0.54
CD28-203ENST00000458610 PCDHA4Q9UN74 947 aa18.43■□□□□ 0.54
CD28-203ENST00000458610 KIAA0355O15063 1070 aa18.42■□□□□ 0.54
CD28-203ENST00000458610 CYP3A4P08684 503 aa18.42■□□□□ 0.54
CD28-203ENST00000458610 ITGB5P18084 799 aa18.42■□□□□ 0.54
CD28-203ENST00000458610 ARHGAP4P98171 946 aa18.42■□□□□ 0.54
CD28-203ENST00000458610 CEP55Q53EZ4 464 aa18.42■□□□□ 0.54
CD28-203ENST00000458610 NFRKBQ6P4R8 1299 aa18.42■□□□□ 0.54
CD28-203ENST00000458610 CYFIP1Q7L576 1253 aa18.42■□□□□ 0.54
CD28-203ENST00000458610 NIPA1Q7RTP0 329 aa18.42■□□□□ 0.54
CD28-203ENST00000458610 NECAB1Q8N987 351 aa18.42■□□□□ 0.54
CD28-203ENST00000458610 PDLIM7Q9NR12 457 aa18.42■□□□□ 0.54
CD28-203ENST00000458610 SH2B1Q9NRF2 756 aaPredicted RBP18.42■□□□□ 0.54
CD28-203ENST00000458610 RAG1P15918 1043 aa18.41■□□□□ 0.54
CD28-203ENST00000458610 BMP8BP34820 402 aa18.41■□□□□ 0.54
CD28-203ENST00000458610 PSMC6P62333 389 aa18.41■□□□□ 0.54
CD28-203ENST00000458610 FAAP100Q0VG06 881 aa18.41■□□□□ 0.54
CD28-203ENST00000458610 CHRDL2Q6WN34 429 aa18.41■□□□□ 0.54
CD28-203ENST00000458610 FAM126BQ8IXS8 530 aa18.41■□□□□ 0.54
CD28-203ENST00000458610 BLIDQ8IZY5 108 aa18.41■□□□□ 0.54
CD28-203ENST00000458610 PGBD1Q96JS3 809 aa18.41■□□□□ 0.54
CD28-203ENST00000458610 KIF2CQ99661 725 aa18.41■□□□□ 0.54
CD28-203ENST00000458610 SDF4Q9BRK5 362 aa18.41■□□□□ 0.54
CD28-203ENST00000458610 A0A1W2PPC1 479 aa18.4■□□□□ 0.54
CD28-203ENST00000458610 MEIS1O00470 390 aa18.4■□□□□ 0.54
CD28-203ENST00000458610 HOXD8P13378 290 aaPredicted RBP18.4■□□□□ 0.54
CD28-203ENST00000458610 USP11P51784 963 aa18.4■□□□□ 0.54
CD28-203ENST00000458610 SEMA3FQ13275 785 aa18.4■□□□□ 0.54
CD28-203ENST00000458610 NBPF20Q3BBV1 942 aa18.4■□□□□ 0.54
CD28-203ENST00000458610 HSDL1Q3SXM5 330 aa18.4■□□□□ 0.54
CD28-203ENST00000458610 FAM47CQ5HY64 1035 aa18.4■□□□□ 0.54
CD28-203ENST00000458610 DAGLBQ8NCG7 672 aa18.4■□□□□ 0.54
CD28-203ENST00000458610 GDF15Q99988 308 aa18.4■□□□□ 0.54
CD28-203ENST00000458610 LLPHQ9BRT6 129 aaKnown RBP18.4■□□□□ 0.54
CD28-203ENST00000458610 KCNH7Q9NS40 1196 aa18.4■□□□□ 0.54
CD28-203ENST00000458610 COLQQ9Y215 455 aaPredicted RBP18.4■□□□□ 0.54
CD28-203ENST00000458610 KIAA1217Q5T5P2 1943 aa18.4■□□□□ 0.54
CD28-203ENST00000458610 GRIN2DO15399 1336 aa18.4■□□□□ 0.54
CD28-203ENST00000458610 SORBS3O60504 671 aa18.39■□□□□ 0.53
CD28-203ENST00000458610 CTDNEP1O95476 244 aa18.39■□□□□ 0.53
CD28-203ENST00000458610 MAGEA10P43363 369 aaPredicted RBP18.39■□□□□ 0.53
CD28-203ENST00000458610 CHMP4BP1P59074 171 aa18.39■□□□□ 0.53
CD28-203ENST00000458610 TRIM29Q14134 588 aa18.39■□□□□ 0.53
CD28-203ENST00000458610 KRT25Q7Z3Z0 450 aa18.39■□□□□ 0.53
CD28-203ENST00000458610 C7orf31Q8N865 590 aa18.39■□□□□ 0.53
CD28-203ENST00000458610 ALG1Q9BT22 464 aa18.39■□□□□ 0.53
CD28-203ENST00000458610 UBE2OQ9C0C9 1292 aaKnown RBP18.39■□□□□ 0.53
CD28-203ENST00000458610 BRMS1Q9HCU9 246 aa18.39■□□□□ 0.53
CD28-203ENST00000458610 TRIM43BA6NCK2 446 aa18.38■□□□□ 0.53
CD28-203ENST00000458610 TIMP1P01033 207 aa18.38■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms