RNA–Protein interactions for RNA: ENST00000458046.6

SYNE2-207, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best)

Gene SYNE2, Length 2,669 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-207ENST00000458046 CTCFP49711 727 aaPredicted RBP13.1□□□□□ -0.31
SYNE2-207ENST00000458046 GEMIN4P57678 1058 aaKnown RBP13.1□□□□□ -0.31
SYNE2-207ENST00000458046 ACBD5Q5T8D3 534 aaPredicted RBP13.1□□□□□ -0.31
SYNE2-207ENST00000458046 MSL1Q68DK7 614 aa13.1□□□□□ -0.31
SYNE2-207ENST00000458046 RASGRP2Q7LDG7 609 aa13.1□□□□□ -0.31
SYNE2-207ENST00000458046 NELFBQ8WX92 580 aa13.1□□□□□ -0.31
SYNE2-207ENST00000458046 PLIN2Q99541 437 aa13.1□□□□□ -0.31
SYNE2-207ENST00000458046 ARFGAP3Q9NP61 516 aa13.1□□□□□ -0.31
SYNE2-207ENST00000458046 ZNF652Q9Y2D9 606 aa13.1□□□□□ -0.31
SYNE2-207ENST00000458046 DDX52Q9Y2R4 599 aaKnown RBP eCLIP13.1□□□□□ -0.31
SYNE2-207ENST00000458046 KRT18P05783 430 aaKnown RBP13.1□□□□□ -0.31
SYNE2-207ENST00000458046 CHMP4BP1P59074 171 aa13.1□□□□□ -0.31
SYNE2-207ENST00000458046 ERVK-24P63145 666 aa13.1□□□□□ -0.31
SYNE2-207ENST00000458046 PAK1Q13153 545 aa13.1□□□□□ -0.31
SYNE2-207ENST00000458046 NFE2Q16621 373 aaPredicted RBP13.1□□□□□ -0.31
SYNE2-207ENST00000458046 ANKRD13BQ86YJ7 626 aa13.1□□□□□ -0.31
SYNE2-207ENST00000458046 CNGA4Q8IV77 575 aa13.1□□□□□ -0.31
SYNE2-207ENST00000458046 CRNKL1Q9BZJ0 848 aaKnown RBP13.1□□□□□ -0.31
SYNE2-207ENST00000458046 TRIM37O94972 964 aa13.09□□□□□ -0.31
SYNE2-207ENST00000458046 RASA1P20936 1047 aa13.09□□□□□ -0.31
SYNE2-207ENST00000458046 TXLNAP40222 546 aa13.09□□□□□ -0.31
SYNE2-207ENST00000458046 COPB1P53618 953 aaKnown RBP13.09□□□□□ -0.31
SYNE2-207ENST00000458046 PFKFB3Q16875 520 aaPredicted RBP13.09□□□□□ -0.31
SYNE2-207ENST00000458046 UBE2Q1Q7Z7E8 422 aa13.09□□□□□ -0.31
SYNE2-207ENST00000458046 SLC35F6Q8N357 371 aa13.09□□□□□ -0.31
SYNE2-207ENST00000458046 FRS2Q8WU20 508 aa13.09□□□□□ -0.31
SYNE2-207ENST00000458046 E2F7Q96AV8 911 aa13.09□□□□□ -0.31
SYNE2-207ENST00000458046 TBC1D20Q96BZ9 403 aa13.09□□□□□ -0.31
SYNE2-207ENST00000458046 BAZ2AQ9UIF9 1905 aaKnown RBP13.09□□□□□ -0.31
SYNE2-207ENST00000458046 PP2D1A8MPX8 630 aa13.09□□□□□ -0.31
SYNE2-207ENST00000458046 KCNJ18B7U540 433 aa13.09□□□□□ -0.31
SYNE2-207ENST00000458046 RPN1P04843 607 aaKnown RBP13.09□□□□□ -0.31
SYNE2-207ENST00000458046 USP17L8P0C7I0 530 aa13.09□□□□□ -0.31
SYNE2-207ENST00000458046 PRCPP42785 496 aa13.09□□□□□ -0.31
SYNE2-207ENST00000458046 KCNJ12Q14500 433 aa13.09□□□□□ -0.31
SYNE2-207ENST00000458046 SMC1AQ14683 1233 aaKnown RBP13.09□□□□□ -0.31
SYNE2-207ENST00000458046 SF3B3Q15393 1217 aaKnown RBP13.09□□□□□ -0.31
SYNE2-207ENST00000458046 TMEM259Q4ZIN3 620 aa13.09□□□□□ -0.31
SYNE2-207ENST00000458046 BRDTQ58F21 947 aaPredicted RBP13.09□□□□□ -0.31
SYNE2-207ENST00000458046 SRGAP1Q7Z6B7 1085 aa13.09□□□□□ -0.31
SYNE2-207ENST00000458046 STAG2Q8N3U4 1231 aa13.09□□□□□ -0.31
SYNE2-207ENST00000458046 SLC16A10Q8TF71 515 aa13.09□□□□□ -0.31
SYNE2-207ENST00000458046 DUSP9Q99956 384 aaKnown RBP13.09□□□□□ -0.31
SYNE2-207ENST00000458046 MCM9Q9NXL9 1143 aa13.09□□□□□ -0.31
SYNE2-207ENST00000458046 LIMA1Q9UHB6 759 aaKnown RBP13.09□□□□□ -0.31
SYNE2-207ENST00000458046 RWDD2AQ9UIY3 292 aa13.09□□□□□ -0.31
SYNE2-207ENST00000458046 FAM205AQ6ZU69 1335 aa13.09□□□□□ -0.31
SYNE2-207ENST00000458046 TRIM49BA6NDI0 452 aa13.08□□□□□ -0.31
SYNE2-207ENST00000458046 ORC4O43929 436 aa13.08□□□□□ -0.31
SYNE2-207ENST00000458046 GRAMD1BQ3KR37 738 aa13.08□□□□□ -0.31
SYNE2-207ENST00000458046 TCP11X2Q5H9J9 407 aa13.08□□□□□ -0.31
SYNE2-207ENST00000458046 RCSD1Q6JBY9 416 aa13.08□□□□□ -0.31
SYNE2-207ENST00000458046 RASSF8Q8NHQ8 419 aa13.08□□□□□ -0.31
SYNE2-207ENST00000458046 CDHR1Q96JP9 859 aa13.08□□□□□ -0.31
SYNE2-207ENST00000458046 ASB16Q96NS5 453 aa13.08□□□□□ -0.31
SYNE2-207ENST00000458046 SLF1Q9BQI6 1058 aa13.08□□□□□ -0.31
SYNE2-207ENST00000458046 YY1AP1Q9H869 796 aa13.08□□□□□ -0.31
SYNE2-207ENST00000458046 ABHD10Q9NUJ1 306 aa13.08□□□□□ -0.31
SYNE2-207ENST00000458046 CDC23Q9UJX2 597 aa13.08□□□□□ -0.31
SYNE2-207ENST00000458046 NOVA2Q9UNW9 492 aaKnown RBP13.08□□□□□ -0.31
SYNE2-207ENST00000458046 PCDHGB7Q9Y5F8 929 aa13.08□□□□□ -0.31
SYNE2-207ENST00000458046 PPP2R3BQ9Y5P8 575 aa13.08□□□□□ -0.31
SYNE2-207ENST00000458046 DUOX1Q9NRD9 1551 aa13.08□□□□□ -0.32
SYNE2-207ENST00000458046 MYH6P13533 1939 aa13.08□□□□□ -0.32
SYNE2-207ENST00000458046 CAND2O75155 1236 aa13.08□□□□□ -0.32
SYNE2-207ENST00000458046 PCP11498 1178 aaKnown RBP13.08□□□□□ -0.32
SYNE2-207ENST00000458046 OAS2P29728 719 aaKnown RBP13.08□□□□□ -0.32
SYNE2-207ENST00000458046 HIBADHP31937 336 aaKnown RBP13.08□□□□□ -0.32
SYNE2-207ENST00000458046 KRT9P35527 623 aa13.08□□□□□ -0.32
SYNE2-207ENST00000458046 STAT6P42226 847 aa13.08□□□□□ -0.32
SYNE2-207ENST00000458046 CD151P48509 253 aa13.08□□□□□ -0.32
SYNE2-207ENST00000458046 TFAP4Q01664 338 aa13.08□□□□□ -0.32
SYNE2-207ENST00000458046 UBXN1Q04323 297 aa13.08□□□□□ -0.32
SYNE2-207ENST00000458046 COL19A1Q14993 1142 aa13.08□□□□□ -0.32
SYNE2-207ENST00000458046 GJC2Q5T442 439 aaPredicted RBP13.08□□□□□ -0.32
SYNE2-207ENST00000458046 ZNF658Q5TYW1 1059 aaPredicted RBP13.08□□□□□ -0.32
SYNE2-207ENST00000458046 PLPP6Q8IY26 295 aa13.08□□□□□ -0.32
SYNE2-207ENST00000458046 TEX19Q8NA77 164 aa13.08□□□□□ -0.32
SYNE2-207ENST00000458046 EEF2KMTQ96G04 330 aa13.08□□□□□ -0.32
SYNE2-207ENST00000458046 CHP1Q99653 195 aa13.08□□□□□ -0.32
SYNE2-207ENST00000458046 FUT8Q9BYC5 575 aa13.08□□□□□ -0.32
SYNE2-207ENST00000458046 STK32BQ9NY57 414 aa13.08□□□□□ -0.32
SYNE2-207ENST00000458046 ODF2LQ9ULJ1 636 aa13.08□□□□□ -0.32
SYNE2-207ENST00000458046 SPATA31A5Q5VU36 1347 aa13.08□□□□□ -0.32
SYNE2-207ENST00000458046 SPATA31A7Q8IWB4 1347 aa13.08□□□□□ -0.32
SYNE2-207ENST00000458046 CTAGE9A4FU28 777 aa13.07□□□□□ -0.32
SYNE2-207ENST00000458046 LRRC10BA6NIK2 292 aa13.07□□□□□ -0.32
SYNE2-207ENST00000458046 P4HBP07237 508 aaKnown RBP13.07□□□□□ -0.32
SYNE2-207ENST00000458046 LONRF2Q1L5Z9 754 aa13.07□□□□□ -0.32
SYNE2-207ENST00000458046 TXNRD3Q86VQ6 643 aa13.07□□□□□ -0.32
SYNE2-207ENST00000458046 TMTC1Q8IUR5 882 aa13.07□□□□□ -0.32
SYNE2-207ENST00000458046 BLIDQ8IZY5 108 aa13.07□□□□□ -0.32
SYNE2-207ENST00000458046 C4orf32Q8N8J7 132 aa13.07□□□□□ -0.32
SYNE2-207ENST00000458046 DYNLL2Q96FJ2 89 aa13.07□□□□□ -0.32
SYNE2-207ENST00000458046 KAT14Q9H8E8 782 aa13.07□□□□□ -0.32
SYNE2-207ENST00000458046 RABGAP1Q9Y3P9 1069 aa13.07□□□□□ -0.32
SYNE2-207ENST00000458046 TAF1P21675 1872 aa13.07□□□□□ -0.32
SYNE2-207ENST00000458046 A0A1W2PRQ8 180 aa13.07□□□□□ -0.32
SYNE2-207ENST00000458046 ATP8B1O43520 1251 aa13.07□□□□□ -0.32
SYNE2-207ENST00000458046 ECEL1O95672 775 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms