RNA–Protein interactions for RNA: ENST00000457863.1

HMGB3P30-201, Transcript of high mobility group box 3 pseudogene 30, humanhuman

BASIC

Gene HMGB3P30, Length 606 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P30-201ENST00000457863 APAF1O14727 1248 aa4.71□□□□□ -1.66
HMGB3P30-201ENST00000457863 HMMRO75330 724 aa4.71□□□□□ -1.66
HMGB3P30-201ENST00000457863 CILPO75339 1184 aa4.71□□□□□ -1.66
HMGB3P30-201ENST00000457863 HNRNPCP07910 306 aaKnown RBP eCLIP4.71□□□□□ -1.66
HMGB3P30-201ENST00000457863 SLC5A1P13866 664 aa4.71□□□□□ -1.66
HMGB3P30-201ENST00000457863 CPEP16870 476 aa4.71□□□□□ -1.66
HMGB3P30-201ENST00000457863 ITKQ08881 620 aa4.71□□□□□ -1.66
HMGB3P30-201ENST00000457863 TBX2Q13207 712 aaPredicted RBP4.71□□□□□ -1.66
HMGB3P30-201ENST00000457863 PWP1Q13610 501 aa4.71□□□□□ -1.66
HMGB3P30-201ENST00000457863 RALGPS1Q5JS13 557 aa4.71□□□□□ -1.66
HMGB3P30-201ENST00000457863 DIEXFQ68CQ4 756 aaKnown RBP4.71□□□□□ -1.66
HMGB3P30-201ENST00000457863 IQCEQ6IPM2 695 aa4.71□□□□□ -1.66
HMGB3P30-201ENST00000457863 SYDE1Q6ZW31 735 aaPredicted RBP4.71□□□□□ -1.66
HMGB3P30-201ENST00000457863 SPATC1Q76KD6 591 aa4.71□□□□□ -1.66
HMGB3P30-201ENST00000457863 MAATS1Q7Z4T9 603 aa4.71□□□□□ -1.66
HMGB3P30-201ENST00000457863 STRA8Q7Z7C7 330 aa4.71□□□□□ -1.66
HMGB3P30-201ENST00000457863 ZBTB46Q86UZ6 589 aa4.71□□□□□ -1.66
HMGB3P30-201ENST00000457863 HSCBQ8IWL3 235 aa4.71□□□□□ -1.66
HMGB3P30-201ENST00000457863 SLFN12Q8IYM2 578 aa4.71□□□□□ -1.66
HMGB3P30-201ENST00000457863 OR8H2Q8N162 312 aa4.71□□□□□ -1.66
HMGB3P30-201ENST00000457863 DTWD2Q8NBA8 298 aa4.71□□□□□ -1.66
HMGB3P30-201ENST00000457863 ZSWIM2Q8NEG5 633 aa4.71□□□□□ -1.66
HMGB3P30-201ENST00000457863 IL17REQ8NFR9 667 aa4.71□□□□□ -1.66
HMGB3P30-201ENST00000457863 GJA10Q969M2 543 aa4.71□□□□□ -1.66
HMGB3P30-201ENST00000457863 CCDC47Q96A33 483 aaKnown RBP4.71□□□□□ -1.66
HMGB3P30-201ENST00000457863 TBC1D20Q96BZ9 403 aa4.71□□□□□ -1.66
HMGB3P30-201ENST00000457863 TBATAQ96M53 351 aa4.71□□□□□ -1.66
HMGB3P30-201ENST00000457863 KRTAP4-9Q9BYQ8 210 aa4.71□□□□□ -1.66
HMGB3P30-201ENST00000457863 GPR62Q9BZJ7 368 aa4.71□□□□□ -1.66
HMGB3P30-201ENST00000457863 DUSP15Q9H1R2 295 aaPredicted RBP4.71□□□□□ -1.66
HMGB3P30-201ENST00000457863 KCNQ5Q9NR82 932 aa4.71□□□□□ -1.66
HMGB3P30-201ENST00000457863 PFDN2Q9UHV9 154 aa4.71□□□□□ -1.66
HMGB3P30-201ENST00000457863 ZMYM5Q9UJ78 669 aa4.71□□□□□ -1.66
HMGB3P30-201ENST00000457863 SPEF1Q9Y4P9 236 aa4.71□□□□□ -1.66
HMGB3P30-201ENST00000457863 PRR36Q9H6K5 1346 aa4.71□□□□□ -1.66
HMGB3P30-201ENST00000457863 FAM221AA4D161 298 aa4.7□□□□□ -1.66
HMGB3P30-201ENST00000457863 BAIAP3O94812 1187 aa4.7□□□□□ -1.66
HMGB3P30-201ENST00000457863 U2AF1L5P0DN76 240 aaPredicted RBP4.7□□□□□ -1.66
HMGB3P30-201ENST00000457863 RXRGP48443 463 aa4.7□□□□□ -1.66
HMGB3P30-201ENST00000457863 YARSP54577 528 aaKnown RBP4.7□□□□□ -1.66
HMGB3P30-201ENST00000457863 U2AF1Q01081 240 aaKnown RBP eCLIP4.7□□□□□ -1.66
HMGB3P30-201ENST00000457863 LMNB2Q03252 620 aa4.7□□□□□ -1.66
HMGB3P30-201ENST00000457863 PABPC4Q13310 644 aaKnown RBP eCLIP4.7□□□□□ -1.66
HMGB3P30-201ENST00000457863 MTA1Q13330 715 aa4.7□□□□□ -1.66
HMGB3P30-201ENST00000457863 TCIRG1Q13488 830 aa4.7□□□□□ -1.66
HMGB3P30-201ENST00000457863 SAFBQ15424 915 aaKnown RBP eCLIP4.7□□□□□ -1.66
HMGB3P30-201ENST00000457863 COBLL1Q53SF7 1204 aa4.7□□□□□ -1.66
HMGB3P30-201ENST00000457863 C1orf228Q6PIY5 440 aa4.7□□□□□ -1.66
HMGB3P30-201ENST00000457863 TTC6Q86TZ1 520 aa4.7□□□□□ -1.66
HMGB3P30-201ENST00000457863 NKAPQ8N5F7 415 aaKnown RBP4.7□□□□□ -1.66
HMGB3P30-201ENST00000457863 ABHD4Q8TB40 342 aa4.7□□□□□ -1.66
HMGB3P30-201ENST00000457863 RNF141Q8WVD5 230 aa4.7□□□□□ -1.66
HMGB3P30-201ENST00000457863 NELL1Q92832 810 aa4.7□□□□□ -1.66
HMGB3P30-201ENST00000457863 CDK5RAP3Q96JB5 506 aa4.7□□□□□ -1.66
HMGB3P30-201ENST00000457863 RHOVQ96L33 236 aa4.7□□□□□ -1.66
HMGB3P30-201ENST00000457863 NELL2Q99435 816 aa4.7□□□□□ -1.66
HMGB3P30-201ENST00000457863 SMAD5Q99717 465 aaKnown RBP4.7□□□□□ -1.66
HMGB3P30-201ENST00000457863 EPB41L4BQ9H329 900 aa4.7□□□□□ -1.66
HMGB3P30-201ENST00000457863 CXorf56Q9H5V9 222 aa4.7□□□□□ -1.66
HMGB3P30-201ENST00000457863 NSUN3Q9H649 340 aaKnown RBP4.7□□□□□ -1.66
HMGB3P30-201ENST00000457863 CD248Q9HCU0 757 aa4.7□□□□□ -1.66
HMGB3P30-201ENST00000457863 GPATCH2Q9NW75 528 aa4.7□□□□□ -1.66
HMGB3P30-201ENST00000457863 SAGE1Q9NXZ1 904 aa4.7□□□□□ -1.66
HMGB3P30-201ENST00000457863 ACTR10Q9NZ32 417 aa4.7□□□□□ -1.66
HMGB3P30-201ENST00000457863 TLR6Q9Y2C9 796 aa4.7□□□□□ -1.66
HMGB3P30-201ENST00000457863 ZNF652Q9Y2D9 606 aa4.7□□□□□ -1.66
HMGB3P30-201ENST00000457863 FAM170AA1A519 330 aa4.69□□□□□ -1.66
HMGB3P30-201ENST00000457863 GREM1O60565 184 aa4.69□□□□□ -1.66
HMGB3P30-201ENST00000457863 AGR2O95994 175 aa4.69□□□□□ -1.66
HMGB3P30-201ENST00000457863 MED14OSP0DP75 135 aa4.69□□□□□ -1.66
HMGB3P30-201ENST00000457863 PLCG1P19174 1290 aa4.69□□□□□ -1.66
HMGB3P30-201ENST00000457863 PSMA3P25788 255 aa4.69□□□□□ -1.66
HMGB3P30-201ENST00000457863 CFPP27918 469 aa4.69□□□□□ -1.66
HMGB3P30-201ENST00000457863 TPP2P29144 1249 aaPredicted RBP4.69□□□□□ -1.66
HMGB3P30-201ENST00000457863 OAS2P29728 719 aaKnown RBP4.69□□□□□ -1.66
HMGB3P30-201ENST00000457863 HOXC13P31276 330 aa4.69□□□□□ -1.66
HMGB3P30-201ENST00000457863 GBP2P32456 591 aaPredicted RBP4.69□□□□□ -1.66
HMGB3P30-201ENST00000457863 PEX19P40855 299 aa4.69□□□□□ -1.66
HMGB3P30-201ENST00000457863 CCT5P48643 541 aa4.69□□□□□ -1.66
HMGB3P30-201ENST00000457863 PSMC1P62191 440 aaKnown RBP4.69□□□□□ -1.66
HMGB3P30-201ENST00000457863 APBA1Q02410 837 aa4.69□□□□□ -1.66
HMGB3P30-201ENST00000457863 SSRP1Q08945 709 aaKnown RBP4.69□□□□□ -1.66
HMGB3P30-201ENST00000457863 STK3Q13188 491 aa4.69□□□□□ -1.66
HMGB3P30-201ENST00000457863 CBX2Q14781 532 aaPredicted RBP4.69□□□□□ -1.66
HMGB3P30-201ENST00000457863 ELF2Q15723 593 aa4.69□□□□□ -1.66
HMGB3P30-201ENST00000457863 FXNQ16595 210 aa4.69□□□□□ -1.66
HMGB3P30-201ENST00000457863 RNF219Q5W0B1 726 aaPredicted RBP4.69□□□□□ -1.66
HMGB3P30-201ENST00000457863 FBXL19Q6PCT2 694 aa4.69□□□□□ -1.66
HMGB3P30-201ENST00000457863 EEPD1Q7L9B9 569 aa4.69□□□□□ -1.66
HMGB3P30-201ENST00000457863 PNMA8AQ86V59 439 aaPredicted RBP4.69□□□□□ -1.66
HMGB3P30-201ENST00000457863 TSPYL5Q86VY4 417 aaPredicted RBP4.69□□□□□ -1.66
HMGB3P30-201ENST00000457863 ANKLE2Q86XL3 938 aa4.69□□□□□ -1.66
HMGB3P30-201ENST00000457863 CREG2Q8IUH2 290 aa4.69□□□□□ -1.66
HMGB3P30-201ENST00000457863 SIAH1Q8IUQ4 282 aa4.69□□□□□ -1.66
HMGB3P30-201ENST00000457863 LRRC56Q8IYG6 542 aaPredicted RBP4.69□□□□□ -1.66
HMGB3P30-201ENST00000457863 GIMAP8Q8ND71 665 aaPredicted RBP4.69□□□□□ -1.66
HMGB3P30-201ENST00000457863 FAM13CQ8NE31 585 aa4.69□□□□□ -1.66
HMGB3P30-201ENST00000457863 PDZD8Q8NEN9 1154 aa4.69□□□□□ -1.66
HMGB3P30-201ENST00000457863 ZSCAN18Q8TBC5 510 aaPredicted RBP4.69□□□□□ -1.66
HMGB3P30-201ENST00000457863 USP33Q8TEY7 942 aa4.69□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms