RNA–Protein interactions for RNA: ENST00000456581.1

LINC00959-201, Transcript of HCG1648656, isoform CRA_a, humanhuman

TSL 2

Gene LINC00959, Length 2,843 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00959-201ENST00000456581 SHTN1A0MZ66 631 aa13.81□□□□□ -0.2
LINC00959-201ENST00000456581 RNF40O75150 1001 aa13.81□□□□□ -0.2
LINC00959-201ENST00000456581 ANKRD40Q6AI12 368 aa13.81□□□□□ -0.2
LINC00959-201ENST00000456581 LARGE2Q8N3Y3 721 aa13.81□□□□□ -0.2
LINC00959-201ENST00000456581 CSGALNACT2Q8N6G5 542 aa13.81□□□□□ -0.2
LINC00959-201ENST00000456581 ANKRD13CQ8N6S4 541 aa13.81□□□□□ -0.2
LINC00959-201ENST00000456581 JAKMIP2Q96AA8 810 aa13.81□□□□□ -0.2
LINC00959-201ENST00000456581 DUSP9Q99956 384 aaKnown RBP13.81□□□□□ -0.2
LINC00959-201ENST00000456581 POTEMA6NI47 508 aa13.8□□□□□ -0.2
LINC00959-201ENST00000456581 SMARCA1P28370 1054 aa13.8□□□□□ -0.2
LINC00959-201ENST00000456581 ICA1Q05084 483 aa13.8□□□□□ -0.2
LINC00959-201ENST00000456581 QRICH1Q2TAL8 776 aa13.8□□□□□ -0.2
LINC00959-201ENST00000456581 DNAJC21Q5F1R6 531 aaKnown RBP13.8□□□□□ -0.2
LINC00959-201ENST00000456581 SLFN13Q68D06 897 aa13.8□□□□□ -0.2
LINC00959-201ENST00000456581 PACS2Q86VP3 889 aa13.8□□□□□ -0.2
LINC00959-201ENST00000456581 NUDT12Q9BQG2 462 aa13.8□□□□□ -0.2
LINC00959-201ENST00000456581 TUBGCP2Q9BSJ2 902 aa13.8□□□□□ -0.2
LINC00959-201ENST00000456581 MMTAG2Q9BU76 263 aaKnown RBP13.8□□□□□ -0.2
LINC00959-201ENST00000456581 NHEJ1Q9H9Q4 299 aaPredicted RBP13.8□□□□□ -0.2
LINC00959-201ENST00000456581 JADE2Q9NQC1 790 aa13.8□□□□□ -0.2
LINC00959-201ENST00000456581 SAR1BQ9Y6B6 198 aa13.8□□□□□ -0.2
LINC00959-201ENST00000456581 A0A1W2PRG0 241 aa13.8□□□□□ -0.2
LINC00959-201ENST00000456581 ZBTB7AO95365 584 aa13.8□□□□□ -0.2
LINC00959-201ENST00000456581 DNA2P51530 1060 aa13.8□□□□□ -0.2
LINC00959-201ENST00000456581 SLC7A5Q01650 507 aa13.8□□□□□ -0.2
LINC00959-201ENST00000456581 SF3B2Q13435 895 aaKnown RBP13.8□□□□□ -0.2
LINC00959-201ENST00000456581 CABP7Q86V35 215 aa13.8□□□□□ -0.2
LINC00959-201ENST00000456581 CAGE1Q8TC20 777 aa13.8□□□□□ -0.2
LINC00959-201ENST00000456581 DNAJC7Q99615 494 aa13.8□□□□□ -0.2
LINC00959-201ENST00000456581 RASSF4Q9H2L5 321 aa13.8□□□□□ -0.2
LINC00959-201ENST00000456581 DHX36Q9H2U1 1008 aaKnown RBP13.8□□□□□ -0.2
LINC00959-201ENST00000456581 MLXIPQ9HAP2 919 aa13.8□□□□□ -0.2
LINC00959-201ENST00000456581 LRWD1Q9UFC0 647 aa13.8□□□□□ -0.2
LINC00959-201ENST00000456581 MYH7BA7E2Y1 1941 aa13.8□□□□□ -0.2
LINC00959-201ENST00000456581 GGCXP38435 758 aa13.79□□□□□ -0.2
LINC00959-201ENST00000456581 ECE1P42892 770 aa13.79□□□□□ -0.2
LINC00959-201ENST00000456581 USP14P54578 494 aa13.79□□□□□ -0.2
LINC00959-201ENST00000456581 ABCB5Q2M3G0 1257 aa13.79□□□□□ -0.2
LINC00959-201ENST00000456581 TTI2Q6NXR4 508 aa13.79□□□□□ -0.2
LINC00959-201ENST00000456581 CCDC155Q8N6L0 562 aa13.79□□□□□ -0.2
LINC00959-201ENST00000456581 F5H6K3 240 aa13.79□□□□□ -0.2
LINC00959-201ENST00000456581 H7C1D1 291 aa13.79□□□□□ -0.2
LINC00959-201ENST00000456581 AGPSO00116 658 aa13.79□□□□□ -0.2
LINC00959-201ENST00000456581 ZBTB5O15062 677 aa13.79□□□□□ -0.2
LINC00959-201ENST00000456581 KLRC3Q07444 240 aa13.79□□□□□ -0.2
LINC00959-201ENST00000456581 TBC1D8BQ0IIM8 1120 aa13.79□□□□□ -0.2
LINC00959-201ENST00000456581 USH1GQ495M9 461 aa13.79□□□□□ -0.2
LINC00959-201ENST00000456581 HSP90B2PQ58FF3 399 aa13.79□□□□□ -0.2
LINC00959-201ENST00000456581 TATDN1Q6P1N9 297 aa13.79□□□□□ -0.2
LINC00959-201ENST00000456581 SAMD1Q6SPF0 538 aaPredicted RBP13.79□□□□□ -0.2
LINC00959-201ENST00000456581 LEKR1Q6ZMV7 388 aa13.79□□□□□ -0.2
LINC00959-201ENST00000456581 MIGA2Q7L4E1 593 aa13.79□□□□□ -0.2
LINC00959-201ENST00000456581 CCDC84Q86UT8 332 aaPredicted RBP13.79□□□□□ -0.2
LINC00959-201ENST00000456581 COG1Q8WTW3 980 aa13.79□□□□□ -0.2
LINC00959-201ENST00000456581 CCDC17Q96LX7 622 aa13.79□□□□□ -0.2
LINC00959-201ENST00000456581 P2RX7Q99572 595 aaKnown RBP13.79□□□□□ -0.2
LINC00959-201ENST00000456581 MRIQ9BWK5 157 aa13.79□□□□□ -0.2
LINC00959-201ENST00000456581 KANSL2Q9H9L4 492 aa13.79□□□□□ -0.2
LINC00959-201ENST00000456581 FAM207AQ9NSI2 230 aaPredicted RBP13.79□□□□□ -0.2
LINC00959-201ENST00000456581 CAPN6Q9Y6Q1 641 aa13.79□□□□□ -0.2
LINC00959-201ENST00000456581 GREB1LQ9C091 1923 aaPredicted RBP13.79□□□□□ -0.2
LINC00959-201ENST00000456581 NCK2O43639 380 aa13.78□□□□□ -0.2
LINC00959-201ENST00000456581 EIF3JO75822 258 aaKnown RBP13.78□□□□□ -0.2
LINC00959-201ENST00000456581 IDEP14735 1019 aa13.78□□□□□ -0.2
LINC00959-201ENST00000456581 HDLBPQ00341 1268 aaKnown RBP13.78□□□□□ -0.2
LINC00959-201ENST00000456581 SPAG1Q07617 926 aa13.78□□□□□ -0.2
LINC00959-201ENST00000456581 IKQ13123 557 aaPredicted RBP13.78□□□□□ -0.2
LINC00959-201ENST00000456581 KIAA1755Q5JYT7 1200 aa13.78□□□□□ -0.2
LINC00959-201ENST00000456581 GLIS3Q8NEA6 775 aa13.78□□□□□ -0.2
LINC00959-201ENST00000456581 CNOT6LQ96LI5 555 aaKnown RBP13.78□□□□□ -0.2
LINC00959-201ENST00000456581 VEZTQ9HBM0 779 aa13.78□□□□□ -0.2
LINC00959-201ENST00000456581 SLC39A2Q9NP94 309 aa13.78□□□□□ -0.2
LINC00959-201ENST00000456581 PPP1R1BQ9UD71 204 aaPredicted RBP13.78□□□□□ -0.2
LINC00959-201ENST00000456581 CAPN11Q9UMQ6 739 aa13.78□□□□□ -0.2
LINC00959-201ENST00000456581 MYO3BQ8WXR4 1341 aa13.78□□□□□ -0.2
LINC00959-201ENST00000456581 ESYT2A0FGR8 921 aa13.78□□□□□ -0.2
LINC00959-201ENST00000456581 NDUFB10O96000 172 aa13.78□□□□□ -0.2
LINC00959-201ENST00000456581 PDE4DQ08499 809 aa13.78□□□□□ -0.2
LINC00959-201ENST00000456581 CT47A1Q5JQC4 288 aaPredicted RBP13.78□□□□□ -0.2
LINC00959-201ENST00000456581 GPATCH4Q5T3I0 446 aaKnown RBP13.78□□□□□ -0.2
LINC00959-201ENST00000456581 PSTPIP2Q9H939 334 aa13.78□□□□□ -0.2
LINC00959-201ENST00000456581 RMND1Q9NWS8 449 aa13.78□□□□□ -0.2
LINC00959-201ENST00000456581 HPCAL4Q9UM19 191 aa13.78□□□□□ -0.2
LINC00959-201ENST00000456581 PCDHA1Q9Y5I3 950 aa13.78□□□□□ -0.2
LINC00959-201ENST00000456581 FAM170AA1A519 330 aa13.77□□□□□ -0.2
LINC00959-201ENST00000456581 POTEB2H3BUK9 544 aa13.77□□□□□ -0.2
LINC00959-201ENST00000456581 PRPF6O94906 941 aaKnown RBP13.77□□□□□ -0.2
LINC00959-201ENST00000456581 MTIF2P46199 727 aaKnown RBP13.77□□□□□ -0.2
LINC00959-201ENST00000456581 FKBP1AP62942 108 aaKnown RBP13.77□□□□□ -0.2
LINC00959-201ENST00000456581 ASIC1P78348 528 aa13.77□□□□□ -0.2
LINC00959-201ENST00000456581 CDC37Q16543 378 aaPredicted RBP13.77□□□□□ -0.2
LINC00959-201ENST00000456581 CALCRLQ16602 461 aa13.77□□□□□ -0.2
LINC00959-201ENST00000456581 ACER1Q8TDN7 264 aa13.77□□□□□ -0.2
LINC00959-201ENST00000456581 MTMR9Q96QG7 549 aa13.77□□□□□ -0.2
LINC00959-201ENST00000456581 CCSER1Q9C0I3 900 aa13.77□□□□□ -0.2
LINC00959-201ENST00000456581 TMEM39BQ9GZU3 492 aa13.77□□□□□ -0.2
LINC00959-201ENST00000456581 RIC8AQ9NPQ8 531 aa13.77□□□□□ -0.2
LINC00959-201ENST00000456581 MAGEC2Q9UBF1 373 aaPredicted RBP13.77□□□□□ -0.2
LINC00959-201ENST00000456581 DMGDHQ9UI17 866 aaKnown RBP13.77□□□□□ -0.2
LINC00959-201ENST00000456581 ATF5Q9Y2D1 282 aaPredicted RBP13.77□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms