RNA–Protein interactions for RNA: ENST00000456545.5

PDLIM2-215, Transcript of PDZ and LIM domain 2, humanhuman

TSL 5

Gene PDLIM2, Length 757 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-215ENST00000456545 FRMPD4Q14CM0 1322 aa20.71■□□□□ 0.91
PDLIM2-215ENST00000456545 NID2Q14112 1375 aa20.71■□□□□ 0.91
PDLIM2-215ENST00000456545 FIBPO43427 364 aa20.7■□□□□ 0.9
PDLIM2-215ENST00000456545 MMP3P08254 477 aa20.7■□□□□ 0.9
PDLIM2-215ENST00000456545 NEDD9Q14511 834 aa20.7■□□□□ 0.9
PDLIM2-215ENST00000456545 CELF3Q5SZQ8 465 aaKnown RBP20.7■□□□□ 0.9
PDLIM2-215ENST00000456545 TYW1BQ6NUM6 668 aa20.7■□□□□ 0.9
PDLIM2-215ENST00000456545 CEP290O15078 2479 aa20.69■□□□□ 0.9
PDLIM2-215ENST00000456545 A0A1W2PPC1 479 aa20.69■□□□□ 0.9
PDLIM2-215ENST00000456545 SPATA31C2B4DYI2 1134 aa20.69■□□□□ 0.9
PDLIM2-215ENST00000456545 NOP56O00567 594 aaKnown RBP20.69■□□□□ 0.9
PDLIM2-215ENST00000456545 KIAA0355O15063 1070 aa20.69■□□□□ 0.9
PDLIM2-215ENST00000456545 GNA11P29992 359 aa20.69■□□□□ 0.9
PDLIM2-215ENST00000456545 ZNF76P36508 570 aa20.69■□□□□ 0.9
PDLIM2-215ENST00000456545 NEK4P51957 841 aa20.69■□□□□ 0.9
PDLIM2-215ENST00000456545 NTRK3Q16288 839 aa20.69■□□□□ 0.9
PDLIM2-215ENST00000456545 NBPF20Q3BBV1 942 aa20.69■□□□□ 0.9
PDLIM2-215ENST00000456545 MYSM1Q5VVJ2 828 aa20.69■□□□□ 0.9
PDLIM2-215ENST00000456545 FAM126BQ8IXS8 530 aa20.69■□□□□ 0.9
PDLIM2-215ENST00000456545 SLC43A3Q8NBI5 491 aa20.69■□□□□ 0.9
PDLIM2-215ENST00000456545 CCDC148Q8NFR7 591 aa20.69■□□□□ 0.9
PDLIM2-215ENST00000456545 PPTC7Q8NI37 304 aa20.69■□□□□ 0.9
PDLIM2-215ENST00000456545 EMID1Q96A84 441 aaPredicted RBP20.69■□□□□ 0.9
PDLIM2-215ENST00000456545 CDHR1Q96JP9 859 aa20.69■□□□□ 0.9
PDLIM2-215ENST00000456545 INPP4AQ96PE3 977 aaPredicted RBP20.69■□□□□ 0.9
PDLIM2-215ENST00000456545 ALDH8A1Q9H2A2 487 aaPredicted RBP20.69■□□□□ 0.9
PDLIM2-215ENST00000456545 CDKL5O76039 1030 aa20.68■□□□□ 0.9
PDLIM2-215ENST00000456545 UBA1P22314 1058 aaKnown RBP20.68■□□□□ 0.9
PDLIM2-215ENST00000456545 ICAM3P32942 547 aa20.68■□□□□ 0.9
PDLIM2-215ENST00000456545 SP2Q02086 613 aa20.68■□□□□ 0.9
PDLIM2-215ENST00000456545 JAKMIP3Q5VZ66 844 aa20.68■□□□□ 0.9
PDLIM2-215ENST00000456545 MCTP2Q6DN12 878 aa20.68■□□□□ 0.9
PDLIM2-215ENST00000456545 GIMAP8Q8ND71 665 aaPredicted RBP20.68■□□□□ 0.9
PDLIM2-215ENST00000456545 PGBD1Q96JS3 809 aa20.68■□□□□ 0.9
PDLIM2-215ENST00000456545 PRO3102Q9H379 93 aa20.68■□□□□ 0.9
PDLIM2-215ENST00000456545 GRIN2DO15399 1336 aa20.68■□□□□ 0.9
PDLIM2-215ENST00000456545 PPFIA4O75335 1185 aa20.67■□□□□ 0.9
PDLIM2-215ENST00000456545 SUPT20HL2P0C7V6 817 aa20.67■□□□□ 0.9
PDLIM2-215ENST00000456545 AK2P54819 239 aa20.67■□□□□ 0.9
PDLIM2-215ENST00000456545 AP3B2Q13367 1082 aa20.67■□□□□ 0.9
PDLIM2-215ENST00000456545 PKN1Q16512 942 aa20.67■□□□□ 0.9
PDLIM2-215ENST00000456545 CYFIP1Q7L576 1253 aa20.67■□□□□ 0.9
PDLIM2-215ENST00000456545 BICD2Q8TD16 824 aa20.67■□□□□ 0.9
PDLIM2-215ENST00000456545 GPRASP2Q96D09 838 aa20.67■□□□□ 0.9
PDLIM2-215ENST00000456545 KATNAL1Q9BW62 490 aa20.67■□□□□ 0.9
PDLIM2-215ENST00000456545 ANO3Q9BYT9 981 aa20.67■□□□□ 0.9
PDLIM2-215ENST00000456545 TRPV6Q9H1D0 765 aa20.67■□□□□ 0.9
PDLIM2-215ENST00000456545 TMEM260Q9NX78 707 aa20.67■□□□□ 0.9
PDLIM2-215ENST00000456545 NOD1Q9Y239 953 aa20.67■□□□□ 0.9
PDLIM2-215ENST00000456545 DNAH12Q6ZR08 3092 aa20.67■□□□□ 0.9
PDLIM2-215ENST00000456545 DEXIO95424 95 aa20.66■□□□□ 0.9
PDLIM2-215ENST00000456545 TIMP1P01033 207 aa20.66■□□□□ 0.9
PDLIM2-215ENST00000456545 NLRP5P59047 1200 aa20.66■□□□□ 0.9
PDLIM2-215ENST00000456545 MTMR1Q13613 665 aa20.66■□□□□ 0.9
PDLIM2-215ENST00000456545 NFRKBQ6P4R8 1299 aa20.66■□□□□ 0.9
PDLIM2-215ENST00000456545 TDHQ8IZJ6 230 aa20.66■□□□□ 0.9
PDLIM2-215ENST00000456545 ALG1Q9BT22 464 aa20.66■□□□□ 0.9
PDLIM2-215ENST00000456545 PPP1R12CQ9BZL4 782 aa20.66■□□□□ 0.9
PDLIM2-215ENST00000456545 ZMYND12Q9H0C1 365 aa20.66■□□□□ 0.9
PDLIM2-215ENST00000456545 ESYT2A0FGR8 921 aa20.65■□□□□ 0.9
PDLIM2-215ENST00000456545 MAFGO15525 162 aa20.65■□□□□ 0.9
PDLIM2-215ENST00000456545 B4GALT4O60513 344 aa20.65■□□□□ 0.9
PDLIM2-215ENST00000456545 CD4P01730 458 aa20.65■□□□□ 0.9
PDLIM2-215ENST00000456545 SP4Q02446 784 aa20.65■□□□□ 0.9
PDLIM2-215ENST00000456545 FPGSQ05932 587 aa20.65■□□□□ 0.9
PDLIM2-215ENST00000456545 PTPN11Q06124 597 aaPredicted RBP20.65■□□□□ 0.9
PDLIM2-215ENST00000456545 HSDL1Q3SXM5 330 aa20.65■□□□□ 0.9
PDLIM2-215ENST00000456545 REXO1Q8N1G1 1221 aaKnown RBP20.65■□□□□ 0.9
PDLIM2-215ENST00000456545 TMEM199Q8N511 208 aa20.65■□□□□ 0.9
PDLIM2-215ENST00000456545 C7orf31Q8N865 590 aa20.65■□□□□ 0.9
PDLIM2-215ENST00000456545 PPP1R13LQ8WUF5 828 aa20.65■□□□□ 0.9
PDLIM2-215ENST00000456545 SENP7Q9BQF6 1050 aa20.65■□□□□ 0.9
PDLIM2-215ENST00000456545 JADE2Q9NQC1 790 aa20.65■□□□□ 0.9
PDLIM2-215ENST00000456545 PKD2L1Q9P0L9 805 aa20.65■□□□□ 0.9
PDLIM2-215ENST00000456545 VPS54Q9P1Q0 977 aa20.65■□□□□ 0.9
PDLIM2-215ENST00000456545 TBX21Q9UL17 535 aa20.65■□□□□ 0.9
PDLIM2-215ENST00000456545 TPCN1Q9ULQ1 816 aa20.65■□□□□ 0.9
PDLIM2-215ENST00000456545 UBIAD1Q9Y5Z9 338 aa20.65■□□□□ 0.9
PDLIM2-215ENST00000456545 PFKFB2O60825 505 aa20.64■□□□□ 0.89
PDLIM2-215ENST00000456545 PSEN2P49810 448 aa20.64■□□□□ 0.89
PDLIM2-215ENST00000456545 SCRN1Q12765 414 aa20.64■□□□□ 0.89
PDLIM2-215ENST00000456545 C8orf34Q49A92 452 aa20.64■□□□□ 0.89
PDLIM2-215ENST00000456545 METTL7BQ6UX53 244 aa20.64■□□□□ 0.89
PDLIM2-215ENST00000456545 MXRA8Q9BRK3 442 aa20.64■□□□□ 0.89
PDLIM2-215ENST00000456545 HIPK3Q9H422 1215 aa20.64■□□□□ 0.89
PDLIM2-215ENST00000456545 UPF2Q9HAU5 1272 aaKnown RBP20.64■□□□□ 0.89
PDLIM2-215ENST00000456545 SH3GLB2Q9NR46 395 aa20.64■□□□□ 0.89
PDLIM2-215ENST00000456545 ZNF286BP0CG31 522 aa20.63■□□□□ 0.89
PDLIM2-215ENST00000456545 ITGB5P18084 799 aa20.63■□□□□ 0.89
PDLIM2-215ENST00000456545 ITGB8P26012 769 aa20.63■□□□□ 0.89
PDLIM2-215ENST00000456545 CLK2P49760 499 aaKnown RBP20.63■□□□□ 0.89
PDLIM2-215ENST00000456545 SEMA3FQ13275 785 aa20.63■□□□□ 0.89
PDLIM2-215ENST00000456545 MFSD10Q14728 455 aa20.63■□□□□ 0.89
PDLIM2-215ENST00000456545 MFSD5Q6N075 450 aa20.63■□□□□ 0.89
PDLIM2-215ENST00000456545 BCAS3Q9H6U6 928 aa20.63■□□□□ 0.89
PDLIM2-215ENST00000456545 TRMT13Q9NUP7 481 aaKnown RBP20.63■□□□□ 0.89
PDLIM2-215ENST00000456545 XBP1P17861 261 aa20.62■□□□□ 0.89
PDLIM2-215ENST00000456545 CYP2C18P33260 490 aa20.62■□□□□ 0.89
PDLIM2-215ENST00000456545 ARHGAP4P98171 946 aa20.62■□□□□ 0.89
PDLIM2-215ENST00000456545 KIAA0753Q2KHM9 967 aa20.62■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms