RNA–Protein interactions for RNA: ENST00000455883.2

CSMD3-204, Transcript of CUB and Sushi multiple domains 3, humanhuman

TSL 1 (best) BASIC

Gene CSMD3, Length 12,485 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-204ENST00000455883 DNM3Q9UQ16 869 aa5.63□□□□□ -1.51
CSMD3-204ENST00000455883 MIA3Q5JRA6 1907 aa5.63□□□□□ -1.51
CSMD3-204ENST00000455883 ASAP2O43150 1006 aa5.63□□□□□ -1.51
CSMD3-204ENST00000455883 NR1D1P20393 614 aa5.63□□□□□ -1.51
CSMD3-204ENST00000455883 EEF1DP29692 281 aaKnown RBP5.63□□□□□ -1.51
CSMD3-204ENST00000455883 RPL22P35268 128 aaKnown RBP5.63□□□□□ -1.51
CSMD3-204ENST00000455883 GIMAP6Q6P9H5 292 aa5.63□□□□□ -1.51
CSMD3-204ENST00000455883 ASPSCR1Q9BZE9 553 aa5.63□□□□□ -1.51
CSMD3-204ENST00000455883 CYP26B1Q9NR63 512 aa5.63□□□□□ -1.51
CSMD3-204ENST00000455883 ATG3Q9NT62 314 aa5.63□□□□□ -1.51
CSMD3-204ENST00000455883 ABCF2Q9UG63 623 aa5.63□□□□□ -1.51
CSMD3-204ENST00000455883 STX8Q9UNK0 236 aa5.63□□□□□ -1.51
CSMD3-204ENST00000455883 TNPO2O14787 897 aaKnown RBP5.63□□□□□ -1.51
CSMD3-204ENST00000455883 ANKRD13DQ6ZTN6 518 aa5.63□□□□□ -1.51
CSMD3-204ENST00000455883 CRLF3Q8IUI8 442 aa5.63□□□□□ -1.51
CSMD3-204ENST00000455883 NUP85Q9BW27 656 aa5.63□□□□□ -1.51
CSMD3-204ENST00000455883 RNF26Q9BY78 433 aaPredicted RBP5.63□□□□□ -1.51
CSMD3-204ENST00000455883 TUBGCP4Q9UGJ1 667 aa5.63□□□□□ -1.51
CSMD3-204ENST00000455883 ABCB11O95342 1321 aa5.63□□□□□ -1.51
CSMD3-204ENST00000455883 RASSF9O75901 435 aa5.63□□□□□ -1.51
CSMD3-204ENST00000455883 PTGS1P23219 599 aa5.63□□□□□ -1.51
CSMD3-204ENST00000455883 PTPREP23469 700 aa5.63□□□□□ -1.51
CSMD3-204ENST00000455883 SMARCA1P28370 1054 aa5.63□□□□□ -1.51
CSMD3-204ENST00000455883 PUM3Q15397 648 aaKnown RBP5.63□□□□□ -1.51
CSMD3-204ENST00000455883 C16orf87Q6PH81 154 aa5.63□□□□□ -1.51
CSMD3-204ENST00000455883 CROCCP3Q8IVE0 287 aa5.63□□□□□ -1.51
CSMD3-204ENST00000455883 CEP44Q9C0F1 390 aa5.63□□□□□ -1.51
CSMD3-204ENST00000455883 RAB20Q9NX57 234 aa5.63□□□□□ -1.51
CSMD3-204ENST00000455883 GVINP1Q7Z2Y8 2422 aa5.63□□□□□ -1.51
CSMD3-204ENST00000455883 PALM2-AKAP2B1ALY0 433 aaPredicted RBP5.63□□□□□ -1.51
CSMD3-204ENST00000455883 ATF2P15336 505 aa5.63□□□□□ -1.51
CSMD3-204ENST00000455883 ZSCAN29Q8IWY8 852 aaPredicted RBP5.63□□□□□ -1.51
CSMD3-204ENST00000455883 APPBP2Q92624 585 aa5.63□□□□□ -1.51
CSMD3-204ENST00000455883 PRRG3Q9BZD7 231 aa5.63□□□□□ -1.51
CSMD3-204ENST00000455883 GPR108Q9NPR9 543 aa5.63□□□□□ -1.51
CSMD3-204ENST00000455883 SUN2Q9UH99 717 aa5.63□□□□□ -1.51
CSMD3-204ENST00000455883 PLCH2O75038 1416 aa5.63□□□□□ -1.51
CSMD3-204ENST00000455883 MCF2LO15068 1137 aa5.63□□□□□ -1.51
CSMD3-204ENST00000455883 NLRP11P59045 1033 aaKnown RBP5.63□□□□□ -1.51
CSMD3-204ENST00000455883 DNM1Q05193 864 aaKnown RBP5.63□□□□□ -1.51
CSMD3-204ENST00000455883 SFSWAPQ12872 951 aaKnown RBP5.63□□□□□ -1.51
CSMD3-204ENST00000455883 HNRNPLLQ8WVV9 542 aaKnown RBP5.63□□□□□ -1.51
CSMD3-204ENST00000455883 KLHL29Q96CT2 875 aa5.63□□□□□ -1.51
CSMD3-204ENST00000455883 MAGED4Q96JG8 741 aa5.63□□□□□ -1.51
CSMD3-204ENST00000455883 BCL2L12Q9HB09 334 aa5.63□□□□□ -1.51
CSMD3-204ENST00000455883 CABP1Q9NZU7 370 aa5.63□□□□□ -1.51
CSMD3-204ENST00000455883 KCND2Q9NZV8 630 aa5.63□□□□□ -1.51
CSMD3-204ENST00000455883 AP3M1Q9Y2T2 418 aa5.63□□□□□ -1.51
CSMD3-204ENST00000455883 AATKQ6ZMQ8 1374 aa5.63□□□□□ -1.51
CSMD3-204ENST00000455883 MAP3K4Q9Y6R4 1608 aa5.63□□□□□ -1.51
CSMD3-204ENST00000455883 FAM177BA6PVY3 158 aa5.63□□□□□ -1.51
CSMD3-204ENST00000455883 MED7O43513 233 aa5.63□□□□□ -1.51
CSMD3-204ENST00000455883 APOEP02649 317 aa5.63□□□□□ -1.51
CSMD3-204ENST00000455883 NDUFA5Q16718 116 aa5.63□□□□□ -1.51
CSMD3-204ENST00000455883 ICA1LQ8NDH6 482 aa5.63□□□□□ -1.51
CSMD3-204ENST00000455883 TMEM206Q9H813 350 aa5.63□□□□□ -1.51
CSMD3-204ENST00000455883 SERPINB3P29508 390 aa5.62□□□□□ -1.51
CSMD3-204ENST00000455883 CCT5P48643 541 aa5.62□□□□□ -1.51
CSMD3-204ENST00000455883 KLC1Q07866 573 aa5.62□□□□□ -1.51
CSMD3-204ENST00000455883 EIF2B5Q13144 721 aaKnown RBP5.62□□□□□ -1.51
CSMD3-204ENST00000455883 MMEL1Q495T6 779 aa5.62□□□□□ -1.51
CSMD3-204ENST00000455883 PRR23CQ6ZRP0 262 aa5.62□□□□□ -1.51
CSMD3-204ENST00000455883 MSL3Q8N5Y2 521 aaKnown RBP5.62□□□□□ -1.51
CSMD3-204ENST00000455883 CFAP61Q8NHU2 1237 aa5.62□□□□□ -1.51
CSMD3-204ENST00000455883 SGSM3Q96HU1 749 aa5.62□□□□□ -1.51
CSMD3-204ENST00000455883 UBN1Q9NPG3 1134 aa5.62□□□□□ -1.51
CSMD3-204ENST00000455883 WDR17Q8IZU2 1322 aa5.62□□□□□ -1.51
CSMD3-204ENST00000455883 PCDH11XQ9BZA7 1347 aa5.62□□□□□ -1.51
CSMD3-204ENST00000455883 PCDH11YQ9BZA8 1340 aa5.62□□□□□ -1.51
CSMD3-204ENST00000455883 ZBTB24O43167 697 aaPredicted RBP5.62□□□□□ -1.51
CSMD3-204ENST00000455883 S100A5P33763 92 aa5.62□□□□□ -1.51
CSMD3-204ENST00000455883 Q6ZUG5 572 aa5.62□□□□□ -1.51
CSMD3-204ENST00000455883 HAUS7Q99871 368 aa5.62□□□□□ -1.51
CSMD3-204ENST00000455883 KIAA1586Q9HCI6 787 aa5.62□□□□□ -1.51
CSMD3-204ENST00000455883 GID8Q9NWU2 228 aa5.62□□□□□ -1.51
CSMD3-204ENST00000455883 RWDD3Q9Y3V2 267 aa5.62□□□□□ -1.51
CSMD3-204ENST00000455883 SCN1AP35498 2009 aa5.62□□□□□ -1.51
CSMD3-204ENST00000455883 MYBL1P10243 752 aa5.62□□□□□ -1.51
CSMD3-204ENST00000455883 TERF2Q15554 542 aa5.62□□□□□ -1.51
CSMD3-204ENST00000455883 UGP2Q16851 508 aa5.62□□□□□ -1.51
CSMD3-204ENST00000455883 TSR2Q969E8 191 aaKnown RBP5.62□□□□□ -1.51
CSMD3-204ENST00000455883 FRMD8P1Q9BZ68 369 aaPredicted RBP5.62□□□□□ -1.51
CSMD3-204ENST00000455883 SCHIP1Q9P0W5 487 aaPredicted RBP5.62□□□□□ -1.51
CSMD3-204ENST00000455883 CNPY2Q9Y2B0 182 aa5.62□□□□□ -1.51
CSMD3-204ENST00000455883 ZMYM2Q9UBW7 1377 aa5.62□□□□□ -1.51
CSMD3-204ENST00000455883 ADCY3O60266 1144 aa5.62□□□□□ -1.51
CSMD3-204ENST00000455883 CTNND1O60716 968 aaKnown RBP5.62□□□□□ -1.51
CSMD3-204ENST00000455883 H2AFZP0C0S5 128 aa5.62□□□□□ -1.51
CSMD3-204ENST00000455883 ABCE1P61221 599 aaKnown RBP5.62□□□□□ -1.51
CSMD3-204ENST00000455883 SNRPFP62306 86 aaKnown RBP5.62□□□□□ -1.51
CSMD3-204ENST00000455883 DMP1Q13316 513 aaPredicted RBP5.62□□□□□ -1.51
CSMD3-204ENST00000455883 H2AFVQ71UI9 128 aa5.62□□□□□ -1.51
CSMD3-204ENST00000455883 PPWD1Q96BP3 646 aaKnown RBP5.62□□□□□ -1.51
CSMD3-204ENST00000455883 RBM41Q96IZ5 413 aaKnown RBP5.62□□□□□ -1.51
CSMD3-204ENST00000455883 BOLA2Q9H3K6 86 aa5.62□□□□□ -1.51
CSMD3-204ENST00000455883 NSMCE4AQ9NXX6 385 aa5.62□□□□□ -1.51
CSMD3-204ENST00000455883 NUB1Q9Y5A7 615 aa5.62□□□□□ -1.51
CSMD3-204ENST00000455883 TDRD6O60522 2096 aaKnown RBP5.62□□□□□ -1.51
CSMD3-204ENST00000455883 ATP10AO60312 1499 aa5.62□□□□□ -1.51
CSMD3-204ENST00000455883 PTPRZ1P23471 2315 aaPredicted RBP5.62□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms