RNA–Protein interactions for RNA: ENST00000455551.6

SEMA4D-213, Transcript of semaphorin 4D, humanhuman

TSL 5 BASIC

Gene SEMA4D, Length 3,594 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-213ENST00000455551 HDXQ7Z353 690 aa13.57□□□□□ -0.24
SEMA4D-213ENST00000455551 ANKRD13CQ8N6S4 541 aa13.57□□□□□ -0.24
SEMA4D-213ENST00000455551 EHBP1Q8NDI1 1231 aa13.57□□□□□ -0.24
SEMA4D-213ENST00000455551 SECISBP2LQ93073 1101 aaKnown RBP13.57□□□□□ -0.24
SEMA4D-213ENST00000455551 DNAJC19Q96DA6 116 aa13.57□□□□□ -0.24
SEMA4D-213ENST00000455551 PSMB7Q99436 277 aa13.57□□□□□ -0.24
SEMA4D-213ENST00000455551 NLRC4Q9NPP4 1024 aa13.57□□□□□ -0.24
SEMA4D-213ENST00000455551 AKR1B10O60218 316 aa13.57□□□□□ -0.24
SEMA4D-213ENST00000455551 KIF11P52732 1056 aa13.57□□□□□ -0.24
SEMA4D-213ENST00000455551 CCDC40Q4G0X9 1142 aa13.57□□□□□ -0.24
SEMA4D-213ENST00000455551 SLC27A3Q5K4L6 730 aa13.57□□□□□ -0.24
SEMA4D-213ENST00000455551 FAM26FQ5R3K3 315 aa13.57□□□□□ -0.24
SEMA4D-213ENST00000455551 HNRNPLLQ8WVV9 542 aaKnown RBP13.57□□□□□ -0.24
SEMA4D-213ENST00000455551 ZNF622Q969S3 477 aaKnown RBP eCLIP13.57□□□□□ -0.24
SEMA4D-213ENST00000455551 GDAP1L1Q96MZ0 367 aa13.57□□□□□ -0.24
SEMA4D-213ENST00000455551 CRACR2AQ9BSW2 395 aa13.57□□□□□ -0.24
SEMA4D-213ENST00000455551 TRPC5Q9UL62 973 aaPredicted RBP13.57□□□□□ -0.24
SEMA4D-213ENST00000455551 L1RE1Q9UN81 338 aa13.57□□□□□ -0.24
SEMA4D-213ENST00000455551 PLAGL2Q9UPG8 496 aa13.57□□□□□ -0.24
SEMA4D-213ENST00000455551 CAPN6Q9Y6Q1 641 aa13.57□□□□□ -0.24
SEMA4D-213ENST00000455551 LTBP1Q14766 1721 aa13.57□□□□□ -0.24
SEMA4D-213ENST00000455551 A0A1W2PQJ5 194 aa13.56□□□□□ -0.24
SEMA4D-213ENST00000455551 DDTLA6NHG4 134 aaPredicted RBP13.56□□□□□ -0.24
SEMA4D-213ENST00000455551 GDF11O95390 407 aa13.56□□□□□ -0.24
SEMA4D-213ENST00000455551 CYP2C19P33261 490 aa13.56□□□□□ -0.24
SEMA4D-213ENST00000455551 APBA1Q02410 837 aa13.56□□□□□ -0.24
SEMA4D-213ENST00000455551 LRRC63Q05C16 580 aa13.56□□□□□ -0.24
SEMA4D-213ENST00000455551 CDC37Q16543 378 aaPredicted RBP13.56□□□□□ -0.24
SEMA4D-213ENST00000455551 FIGNQ5HY92 759 aa13.56□□□□□ -0.24
SEMA4D-213ENST00000455551 MSL1Q68DK7 614 aa13.56□□□□□ -0.24
SEMA4D-213ENST00000455551 CACNA2D4Q7Z3S7 1137 aa13.56□□□□□ -0.24
SEMA4D-213ENST00000455551 PROM2Q8N271 834 aa13.56□□□□□ -0.24
SEMA4D-213ENST00000455551 ZKSCAN7Q9P0L1 754 aaPredicted RBP13.56□□□□□ -0.24
SEMA4D-213ENST00000455551 SUGT1Q9Y2Z0 365 aa13.56□□□□□ -0.24
SEMA4D-213ENST00000455551 MYH10P35580 1976 aa13.56□□□□□ -0.24
SEMA4D-213ENST00000455551 PDE2AO00408 941 aaPredicted RBP13.56□□□□□ -0.24
SEMA4D-213ENST00000455551 MOCS3O95396 460 aa13.56□□□□□ -0.24
SEMA4D-213ENST00000455551 FGFR1OPO95684 399 aaKnown RBP13.56□□□□□ -0.24
SEMA4D-213ENST00000455551 IKQ13123 557 aaPredicted RBP13.56□□□□□ -0.24
SEMA4D-213ENST00000455551 USH1GQ495M9 461 aa13.56□□□□□ -0.24
SEMA4D-213ENST00000455551 PAPD7Q5XG87 772 aaKnown RBP13.56□□□□□ -0.24
SEMA4D-213ENST00000455551 TMC4Q7Z404 712 aa13.56□□□□□ -0.24
SEMA4D-213ENST00000455551 GPBP1Q86WP2 473 aa13.56□□□□□ -0.24
SEMA4D-213ENST00000455551 ANO3Q9BYT9 981 aa13.56□□□□□ -0.24
SEMA4D-213ENST00000455551 EHHADHQ08426 723 aa13.56□□□□□ -0.24
SEMA4D-213ENST00000455551 SEPT2Q15019 361 aa13.56□□□□□ -0.24
SEMA4D-213ENST00000455551 SLFN13Q68D06 897 aa13.56□□□□□ -0.24
SEMA4D-213ENST00000455551 PCDHA13Q9Y5I0 950 aa13.56□□□□□ -0.24
SEMA4D-213ENST00000455551 ONECUT3O60422 494 aaPredicted RBP13.55□□□□□ -0.24
SEMA4D-213ENST00000455551 PHACTR2O75167 634 aa13.55□□□□□ -0.24
SEMA4D-213ENST00000455551 KRT18P05783 430 aaKnown RBP13.55□□□□□ -0.24
SEMA4D-213ENST00000455551 PLA2G4BP0C869 781 aa13.55□□□□□ -0.24
SEMA4D-213ENST00000455551 CASP8Q14790 479 aa13.55□□□□□ -0.24
SEMA4D-213ENST00000455551 ENOX2Q16206 610 aaKnown RBP13.55□□□□□ -0.24
SEMA4D-213ENST00000455551 GSPT2Q8IYD1 628 aaKnown RBP13.55□□□□□ -0.24
SEMA4D-213ENST00000455551 POTEFA5A3E0 1075 aa13.55□□□□□ -0.24
SEMA4D-213ENST00000455551 POTEIP0CG38 1075 aa13.55□□□□□ -0.24
SEMA4D-213ENST00000455551 NPR1P16066 1061 aa13.55□□□□□ -0.24
SEMA4D-213ENST00000455551 C2orf54Q08AI8 447 aa13.55□□□□□ -0.24
SEMA4D-213ENST00000455551 CERKLQ49MI3 558 aaPredicted RBP13.55□□□□□ -0.24
SEMA4D-213ENST00000455551 TDRD12Q587J7 1177 aaKnown RBP13.55□□□□□ -0.24
SEMA4D-213ENST00000455551 HERC4Q5GLZ8 1057 aaPredicted RBP13.55□□□□□ -0.24
SEMA4D-213ENST00000455551 POTEGQ6S5H5 508 aa13.55□□□□□ -0.24
SEMA4D-213ENST00000455551 POTEEQ6S8J3 1075 aa13.55□□□□□ -0.24
SEMA4D-213ENST00000455551 TRIM34Q9BYJ4 488 aa13.55□□□□□ -0.24
SEMA4D-213ENST00000455551 LRRC27Q9C0I9 530 aa13.55□□□□□ -0.24
SEMA4D-213ENST00000455551 TMX4Q9H1E5 349 aaPredicted RBP13.55□□□□□ -0.24
SEMA4D-213ENST00000455551 BMP2KQ9NSY1 1161 aaPredicted RBP13.55□□□□□ -0.24
SEMA4D-213ENST00000455551 VPS18Q9P253 973 aa13.55□□□□□ -0.24
SEMA4D-213ENST00000455551 ATF5Q9Y2D1 282 aaPredicted RBP13.55□□□□□ -0.24
SEMA4D-213ENST00000455551 LRRC37AA6NMS7 1700 aa13.55□□□□□ -0.24
SEMA4D-213ENST00000455551 MEIS1O00470 390 aa13.55□□□□□ -0.24
SEMA4D-213ENST00000455551 TNNT3P45378 269 aaPredicted RBP13.55□□□□□ -0.24
SEMA4D-213ENST00000455551 USP14P54578 494 aa13.55□□□□□ -0.24
SEMA4D-213ENST00000455551 MRPS25P82663 173 aaKnown RBP13.55□□□□□ -0.24
SEMA4D-213ENST00000455551 HHIPL2Q6UWX4 724 aa13.55□□□□□ -0.24
SEMA4D-213ENST00000455551 CCDC102AQ96A19 550 aa13.55□□□□□ -0.24
SEMA4D-213ENST00000455551 QTRT2Q9H974 415 aaKnown RBP13.55□□□□□ -0.24
SEMA4D-213ENST00000455551 COL4A3BPQ9Y5P4 624 aa13.55□□□□□ -0.24
SEMA4D-213ENST00000455551 ANKRD31Q8N7Z5 1873 aa13.54□□□□□ -0.24
SEMA4D-213ENST00000455551 USO1O60763 962 aaKnown RBP13.54□□□□□ -0.24
SEMA4D-213ENST00000455551 GFPT1Q06210 699 aaPredicted RBP13.54□□□□□ -0.24
SEMA4D-213ENST00000455551 PRR16Q569H4 304 aa13.54□□□□□ -0.24
SEMA4D-213ENST00000455551 CCDC84Q86UT8 332 aaPredicted RBP13.54□□□□□ -0.24
SEMA4D-213ENST00000455551 BAP1Q92560 729 aa13.54□□□□□ -0.24
SEMA4D-213ENST00000455551 POLD4Q9HCU8 107 aa13.54□□□□□ -0.24
SEMA4D-213ENST00000455551 LRRIQ3A6PVS8 624 aaPredicted RBP13.54□□□□□ -0.24
SEMA4D-213ENST00000455551 MED24O75448 989 aa13.54□□□□□ -0.24
SEMA4D-213ENST00000455551 GCFC2P16383 781 aaKnown RBP13.54□□□□□ -0.24
SEMA4D-213ENST00000455551 CXCR5P32302 372 aa13.54□□□□□ -0.24
SEMA4D-213ENST00000455551 TUBB4BP68371 445 aa13.54□□□□□ -0.24
SEMA4D-213ENST00000455551 CDK17Q00537 523 aa13.54□□□□□ -0.24
SEMA4D-213ENST00000455551 PSMD2Q13200 908 aa13.54□□□□□ -0.24
SEMA4D-213ENST00000455551 COL23A1Q86Y22 540 aaPredicted RBP13.54□□□□□ -0.24
SEMA4D-213ENST00000455551 MTMR8Q96EF0 704 aa13.54□□□□□ -0.24
SEMA4D-213ENST00000455551 PURBQ96QR8 312 aaKnown RBP13.54□□□□□ -0.24
SEMA4D-213ENST00000455551 P2RX7Q99572 595 aaKnown RBP13.54□□□□□ -0.24
SEMA4D-213ENST00000455551 SMARCAL1Q9NZC9 954 aa13.54□□□□□ -0.24
SEMA4D-213ENST00000455551 MYO3BQ8WXR4 1341 aa13.54□□□□□ -0.24
SEMA4D-213ENST00000455551 MMP10P09238 476 aa13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms