RNA–Protein interactions for RNA: ENST00000455113.6

COPS7A-202, Transcript of COP9 signalosome subunit 7A, humanhuman

TSL 3

Gene COPS7A, Length 1,718 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-202ENST00000455113 EMID1Q96A84 441 aaPredicted RBP20.32■□□□□ 0.84
COPS7A-202ENST00000455113 ZNF274Q96GC6 653 aaPredicted RBP20.32■□□□□ 0.84
COPS7A-202ENST00000455113 ZFP91Q96JP5 570 aaPredicted RBP20.32■□□□□ 0.84
COPS7A-202ENST00000455113 RIC8AQ9NPQ8 531 aa20.32■□□□□ 0.84
COPS7A-202ENST00000455113 MYH7BA7E2Y1 1941 aa20.32■□□□□ 0.84
COPS7A-202ENST00000455113 TRIM43BA6NCK2 446 aa20.31■□□□□ 0.84
COPS7A-202ENST00000455113 PRPF3O43395 683 aaKnown RBP20.31■□□□□ 0.84
COPS7A-202ENST00000455113 RGS20O76081 388 aa20.31■□□□□ 0.84
COPS7A-202ENST00000455113 LARGE1O95461 756 aa20.31■□□□□ 0.84
COPS7A-202ENST00000455113 MMP3P08254 477 aa20.31■□□□□ 0.84
COPS7A-202ENST00000455113 ARHGAP1Q07960 439 aa20.31■□□□□ 0.84
COPS7A-202ENST00000455113 UBE2SQ16763 222 aa20.31■□□□□ 0.84
COPS7A-202ENST00000455113 ME3Q16798 604 aa20.31■□□□□ 0.84
COPS7A-202ENST00000455113 FAM126BQ8IXS8 530 aa20.31■□□□□ 0.84
COPS7A-202ENST00000455113 TRIM22Q8IYM9 498 aa20.31■□□□□ 0.84
COPS7A-202ENST00000455113 TDHQ8IZJ6 230 aa20.31■□□□□ 0.84
COPS7A-202ENST00000455113 BADQ92934 168 aa20.31■□□□□ 0.84
COPS7A-202ENST00000455113 TRIM43Q96BQ3 446 aaPredicted RBP20.31■□□□□ 0.84
COPS7A-202ENST00000455113 ZSCAN31Q96LW9 406 aaPredicted RBP20.31■□□□□ 0.84
COPS7A-202ENST00000455113 RNF26Q9BY78 433 aaPredicted RBP20.31■□□□□ 0.84
COPS7A-202ENST00000455113 PCDHA6Q9UN73 950 aa20.31■□□□□ 0.84
COPS7A-202ENST00000455113 PCDHA8Q9Y5H6 950 aa20.31■□□□□ 0.84
COPS7A-202ENST00000455113 STXBP3O00186 592 aa20.3■□□□□ 0.84
COPS7A-202ENST00000455113 KIAA0355O15063 1070 aa20.3■□□□□ 0.84
COPS7A-202ENST00000455113 FIBPO43427 364 aa20.3■□□□□ 0.84
COPS7A-202ENST00000455113 GGPS1O95749 300 aa20.3■□□□□ 0.84
COPS7A-202ENST00000455113 FOSP01100 380 aaPredicted RBP20.3■□□□□ 0.84
COPS7A-202ENST00000455113 CHMP4BP1P59074 171 aa20.3■□□□□ 0.84
COPS7A-202ENST00000455113 MRPS9P82933 396 aaKnown RBP20.3■□□□□ 0.84
COPS7A-202ENST00000455113 NEDD9Q14511 834 aa20.3■□□□□ 0.84
COPS7A-202ENST00000455113 FAM47CQ5HY64 1035 aa20.3■□□□□ 0.84
COPS7A-202ENST00000455113 SLC43A3Q8NBI5 491 aa20.3■□□□□ 0.84
COPS7A-202ENST00000455113 PPTC7Q8NI37 304 aa20.3■□□□□ 0.84
COPS7A-202ENST00000455113 CDHR1Q96JP9 859 aa20.3■□□□□ 0.84
COPS7A-202ENST00000455113 SPATA33Q96N06 139 aa20.3■□□□□ 0.84
COPS7A-202ENST00000455113 INPP4AQ96PE3 977 aaPredicted RBP20.3■□□□□ 0.84
COPS7A-202ENST00000455113 SUPT20HL2P0C7V6 817 aa20.3■□□□□ 0.84
COPS7A-202ENST00000455113 CELF3Q5SZQ8 465 aaKnown RBP20.3■□□□□ 0.84
COPS7A-202ENST00000455113 PHKBQ93100 1093 aa20.3■□□□□ 0.84
COPS7A-202ENST00000455113 IPO9Q96P70 1041 aaKnown RBP20.3■□□□□ 0.84
COPS7A-202ENST00000455113 KATNAL1Q9BW62 490 aa20.3■□□□□ 0.84
COPS7A-202ENST00000455113 SLC26A6Q9BXS9 759 aa20.3■□□□□ 0.84
COPS7A-202ENST00000455113 C6orf50Q9HD87 102 aa20.3■□□□□ 0.84
COPS7A-202ENST00000455113 SH2B1Q9NRF2 756 aaPredicted RBP20.3■□□□□ 0.84
COPS7A-202ENST00000455113 NOP56O00567 594 aaKnown RBP20.29■□□□□ 0.84
COPS7A-202ENST00000455113 IFNAR1P17181 557 aa20.29■□□□□ 0.84
COPS7A-202ENST00000455113 UBA1P22314 1058 aaKnown RBP20.29■□□□□ 0.84
COPS7A-202ENST00000455113 GNA11P29992 359 aa20.29■□□□□ 0.84
COPS7A-202ENST00000455113 ICAM3P32942 547 aa20.29■□□□□ 0.84
COPS7A-202ENST00000455113 STK3Q13188 491 aa20.29■□□□□ 0.84
COPS7A-202ENST00000455113 MYSM1Q5VVJ2 828 aa20.29■□□□□ 0.84
COPS7A-202ENST00000455113 CCDC148Q8NFR7 591 aa20.29■□□□□ 0.84
COPS7A-202ENST00000455113 TIMP1P01033 207 aa20.28■□□□□ 0.84
COPS7A-202ENST00000455113 SSRP1Q08945 709 aaKnown RBP20.28■□□□□ 0.84
COPS7A-202ENST00000455113 AP3B2Q13367 1082 aa20.28■□□□□ 0.84
COPS7A-202ENST00000455113 NFRKBQ6P4R8 1299 aa20.28■□□□□ 0.84
COPS7A-202ENST00000455113 GIMAP8Q8ND71 665 aaPredicted RBP20.28■□□□□ 0.84
COPS7A-202ENST00000455113 NCOA5Q9HCD5 579 aaKnown RBP20.28■□□□□ 0.84
COPS7A-202ENST00000455113 LTBP2Q14767 1821 aa20.28■□□□□ 0.84
COPS7A-202ENST00000455113 SORBS3O60504 671 aa20.27■□□□□ 0.84
COPS7A-202ENST00000455113 PPFIA4O75335 1185 aa20.27■□□□□ 0.84
COPS7A-202ENST00000455113 CD4P01730 458 aa20.27■□□□□ 0.84
COPS7A-202ENST00000455113 NBPF20Q3BBV1 942 aa20.27■□□□□ 0.84
COPS7A-202ENST00000455113 MCTP2Q6DN12 878 aa20.27■□□□□ 0.84
COPS7A-202ENST00000455113 TYW1BQ6NUM6 668 aa20.27■□□□□ 0.84
COPS7A-202ENST00000455113 NECAB1Q8N987 351 aa20.27■□□□□ 0.84
COPS7A-202ENST00000455113 GPRASP2Q96D09 838 aa20.27■□□□□ 0.84
COPS7A-202ENST00000455113 SLKQ9H2G2 1235 aaPredicted RBP20.27■□□□□ 0.84
COPS7A-202ENST00000455113 PCDH10Q9P2E7 1040 aa20.27■□□□□ 0.84
COPS7A-202ENST00000455113 TBX21Q9UL17 535 aa20.27■□□□□ 0.84
COPS7A-202ENST00000455113 NOD1Q9Y239 953 aa20.27■□□□□ 0.84
COPS7A-202ENST00000455113 GRIN2DO15399 1336 aa20.27■□□□□ 0.84
COPS7A-202ENST00000455113 SPATA31C2B4DYI2 1134 aa20.27■□□□□ 0.83
COPS7A-202ENST00000455113 B4GALT4O60513 344 aa20.27■□□□□ 0.83
COPS7A-202ENST00000455113 PFKFB2O60825 505 aa20.27■□□□□ 0.83
COPS7A-202ENST00000455113 CDKL5O76039 1030 aa20.27■□□□□ 0.83
COPS7A-202ENST00000455113 FPGSQ05932 587 aa20.27■□□□□ 0.83
COPS7A-202ENST00000455113 PTPN11Q06124 597 aaPredicted RBP20.27■□□□□ 0.83
COPS7A-202ENST00000455113 NTRK3Q16288 839 aa20.27■□□□□ 0.83
COPS7A-202ENST00000455113 TMEM199Q8N511 208 aa20.27■□□□□ 0.83
COPS7A-202ENST00000455113 BICD2Q8TD16 824 aa20.27■□□□□ 0.83
COPS7A-202ENST00000455113 SENP7Q9BQF6 1050 aa20.27■□□□□ 0.83
COPS7A-202ENST00000455113 DAXXQ9UER7 740 aaPredicted RBP20.27■□□□□ 0.83
COPS7A-202ENST00000455113 ESYT2A0FGR8 921 aa20.26■□□□□ 0.83
COPS7A-202ENST00000455113 MAFGO15525 162 aa20.26■□□□□ 0.83
COPS7A-202ENST00000455113 SP2Q02086 613 aa20.26■□□□□ 0.83
COPS7A-202ENST00000455113 MTMR1Q13613 665 aa20.26■□□□□ 0.83
COPS7A-202ENST00000455113 ANO3Q9BYT9 981 aa20.26■□□□□ 0.83
COPS7A-202ENST00000455113 PPP1R12CQ9BZL4 782 aa20.26■□□□□ 0.83
COPS7A-202ENST00000455113 ZMYND12Q9H0C1 365 aa20.26■□□□□ 0.83
COPS7A-202ENST00000455113 HIPK3Q9H422 1215 aa20.26■□□□□ 0.83
COPS7A-202ENST00000455113 TRIOBPQ9H2D6 2365 aa20.26■□□□□ 0.83
COPS7A-202ENST00000455113 SCN10AQ9Y5Y9 1956 aa20.26■□□□□ 0.83
COPS7A-202ENST00000455113 PPFIA3O75145 1194 aa20.25■□□□□ 0.83
COPS7A-202ENST00000455113 FXR1P51114 621 aaKnown RBP eCLIP20.25■□□□□ 0.83
COPS7A-202ENST00000455113 CUL4AQ13619 759 aa20.25■□□□□ 0.83
COPS7A-202ENST00000455113 HSDL1Q3SXM5 330 aa20.25■□□□□ 0.83
COPS7A-202ENST00000455113 MFSD5Q6N075 450 aa20.25■□□□□ 0.83
COPS7A-202ENST00000455113 METTL7BQ6UX53 244 aa20.25■□□□□ 0.83
COPS7A-202ENST00000455113 CYFIP1Q7L576 1253 aa20.25■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms