RNA–Protein interactions for RNA: ENST00000455076.1

TNRC18-208, Transcript of trinucleotide repeat containing 18, humanhuman

TSL 2

Gene TNRC18, Length 577 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNRC18-208ENST00000455076 NTRK3Q16288 839 aa23.43■■□□□ 1.34
TNRC18-208ENST00000455076 DGKDQ16760 1214 aa23.43■■□□□ 1.34
TNRC18-208ENST00000455076 PFKFB3Q16875 520 aaPredicted RBP23.43■■□□□ 1.34
TNRC18-208ENST00000455076 DHX37Q8IY37 1157 aaKnown RBP23.43■■□□□ 1.34
TNRC18-208ENST00000455076 KAT2BQ92831 832 aa23.43■■□□□ 1.34
TNRC18-208ENST00000455076 GLT8D2Q9H1C3 349 aa23.43■■□□□ 1.34
TNRC18-208ENST00000455076 RIC8AQ9NPQ8 531 aa23.43■■□□□ 1.34
TNRC18-208ENST00000455076 GGPS1O95749 300 aa23.42■■□□□ 1.34
TNRC18-208ENST00000455076 F2P00734 622 aa23.42■■□□□ 1.34
TNRC18-208ENST00000455076 SUPT20HL2P0C7V6 817 aa23.42■■□□□ 1.34
TNRC18-208ENST00000455076 NAPAP54920 295 aa23.42■■□□□ 1.34
TNRC18-208ENST00000455076 NBPF20Q3BBV1 942 aa23.42■■□□□ 1.34
TNRC18-208ENST00000455076 SENP7Q9BQF6 1050 aa23.42■■□□□ 1.34
TNRC18-208ENST00000455076 ESYT2A0FGR8 921 aa23.41■■□□□ 1.34
TNRC18-208ENST00000455076 SPDYE3A6NKU9 549 aa23.41■■□□□ 1.34
TNRC18-208ENST00000455076 PPFIA4O75335 1185 aa23.41■■□□□ 1.34
TNRC18-208ENST00000455076 PDIA3P30101 505 aaKnown RBP23.41■■□□□ 1.34
TNRC18-208ENST00000455076 UBE2SQ16763 222 aa23.41■■□□□ 1.34
TNRC18-208ENST00000455076 GPRASP2Q96D09 838 aa23.41■■□□□ 1.34
TNRC18-208ENST00000455076 NOC4LQ9BVI4 516 aaKnown RBP23.41■■□□□ 1.34
TNRC18-208ENST00000455076 TRPV6Q9H1D0 765 aa23.41■■□□□ 1.34
TNRC18-208ENST00000455076 HAS3O00219 553 aa23.4■■□□□ 1.34
TNRC18-208ENST00000455076 PRPF3O43395 683 aaKnown RBP23.4■■□□□ 1.34
TNRC18-208ENST00000455076 SCG2P13521 617 aa23.4■■□□□ 1.34
TNRC18-208ENST00000455076 IFNAR1P17181 557 aa23.4■■□□□ 1.34
TNRC18-208ENST00000455076 CLK2P49760 499 aaKnown RBP23.4■■□□□ 1.34
TNRC18-208ENST00000455076 EPHB4P54760 987 aa23.4■■□□□ 1.34
TNRC18-208ENST00000455076 NEDD9Q14511 834 aa23.4■■□□□ 1.34
TNRC18-208ENST00000455076 SHHQ15465 462 aa23.4■■□□□ 1.34
TNRC18-208ENST00000455076 HSDL1Q3SXM5 330 aa23.4■■□□□ 1.34
TNRC18-208ENST00000455076 C9orf50Q5SZB4 431 aa23.4■■□□□ 1.34
TNRC18-208ENST00000455076 METTL7BQ6UX53 244 aa23.4■■□□□ 1.34
TNRC18-208ENST00000455076 KATNAL1Q9BW62 490 aa23.4■■□□□ 1.34
TNRC18-208ENST00000455076 RNF26Q9BY78 433 aaPredicted RBP23.4■■□□□ 1.34
TNRC18-208ENST00000455076 HIPK3Q9H422 1215 aa23.4■■□□□ 1.34
TNRC18-208ENST00000455076 NAP1L2Q9ULW6 460 aaPredicted RBP23.4■■□□□ 1.34
TNRC18-208ENST00000455076 PCDHA6Q9UN73 950 aa23.4■■□□□ 1.34
TNRC18-208ENST00000455076 PCDHA8Q9Y5H6 950 aa23.4■■□□□ 1.34
TNRC18-208ENST00000455076 FOSP01100 380 aaPredicted RBP23.39■■□□□ 1.33
TNRC18-208ENST00000455076 ADCY7P51828 1080 aa23.39■■□□□ 1.33
TNRC18-208ENST00000455076 AP3B2Q13367 1082 aa23.39■■□□□ 1.33
TNRC18-208ENST00000455076 PPIGQ13427 754 aaKnown RBP eCLIP23.39■■□□□ 1.33
TNRC18-208ENST00000455076 PKN1Q16512 942 aa23.39■■□□□ 1.33
TNRC18-208ENST00000455076 NLRX1Q86UT6 975 aa23.39■■□□□ 1.33
TNRC18-208ENST00000455076 TMEM199Q8N511 208 aa23.39■■□□□ 1.33
TNRC18-208ENST00000455076 ZNF274Q96GC6 653 aaPredicted RBP23.39■■□□□ 1.33
TNRC18-208ENST00000455076 LRCH3Q96II8 777 aa23.39■■□□□ 1.33
TNRC18-208ENST00000455076 ZFP91Q96JP5 570 aaPredicted RBP23.39■■□□□ 1.33
TNRC18-208ENST00000455076 CDHR1Q96JP9 859 aa23.39■■□□□ 1.33
TNRC18-208ENST00000455076 SPATA33Q96N06 139 aa23.39■■□□□ 1.33
TNRC18-208ENST00000455076 EHMT1Q9H9B1 1298 aa23.39■■□□□ 1.33
TNRC18-208ENST00000455076 TRMT13Q9NUP7 481 aaKnown RBP23.39■■□□□ 1.33
TNRC18-208ENST00000455076 UBIAD1Q9Y5Z9 338 aa23.39■■□□□ 1.33
TNRC18-208ENST00000455076 UPF3BQ9BZI7 483 aaKnown RBP23.38■■□□□ 1.33
TNRC18-208ENST00000455076 PPP1R12CQ9BZL4 782 aa23.38■■□□□ 1.33
TNRC18-208ENST00000455076 ZMYND12Q9H0C1 365 aa23.38■■□□□ 1.33
TNRC18-208ENST00000455076 RTEL1Q9NZ71 1219 aa23.38■■□□□ 1.33
TNRC18-208ENST00000455076 TANC1Q9C0D5 1861 aa23.38■■□□□ 1.33
TNRC18-208ENST00000455076 SMCO2A6NFE2 343 aa23.37■■□□□ 1.33
TNRC18-208ENST00000455076 MAFGO15525 162 aa23.37■■□□□ 1.33
TNRC18-208ENST00000455076 ITGB5P18084 799 aa23.37■■□□□ 1.33
TNRC18-208ENST00000455076 GIMAP8Q8ND71 665 aaPredicted RBP23.37■■□□□ 1.33
TNRC18-208ENST00000455076 CCDC12Q8WUD4 166 aaPredicted RBP23.37■■□□□ 1.33
TNRC18-208ENST00000455076 WNT8AQ9H1J5 351 aa23.37■■□□□ 1.33
TNRC18-208ENST00000455076 MLXIPQ9HAP2 919 aa23.37■■□□□ 1.33
TNRC18-208ENST00000455076 DOCK5Q9H7D0 1870 aa23.36■■□□□ 1.33
TNRC18-208ENST00000455076 UMODL1Q5DID0 1318 aa23.36■■□□□ 1.33
TNRC18-208ENST00000455076 PITPNM1O00562 1244 aa23.36■■□□□ 1.33
TNRC18-208ENST00000455076 CYP2C18P33260 490 aa23.36■■□□□ 1.33
TNRC18-208ENST00000455076 PSEN2P49810 448 aa23.36■■□□□ 1.33
TNRC18-208ENST00000455076 CTAGE1Q96RT6 745 aa23.36■■□□□ 1.33
TNRC18-208ENST00000455076 C16orf70Q9BSU1 422 aa23.36■■□□□ 1.33
TNRC18-208ENST00000455076 ANO3Q9BYT9 981 aa23.36■■□□□ 1.33
TNRC18-208ENST00000455076 GTF2IRD1Q9UHL9 959 aa23.36■■□□□ 1.33
TNRC18-208ENST00000455076 ZNF286BP0CG31 522 aa23.35■■□□□ 1.33
TNRC18-208ENST00000455076 CSF2RAP15509 400 aa23.35■■□□□ 1.33
TNRC18-208ENST00000455076 KCNA2P16389 499 aa23.35■■□□□ 1.33
TNRC18-208ENST00000455076 SREBF1P36956 1147 aa23.35■■□□□ 1.33
TNRC18-208ENST00000455076 RBL2Q08999 1139 aa23.35■■□□□ 1.33
TNRC18-208ENST00000455076 MFSD10Q14728 455 aa23.35■■□□□ 1.33
TNRC18-208ENST00000455076 FAM47CQ5HY64 1035 aa23.35■■□□□ 1.33
TNRC18-208ENST00000455076 RASIP1Q5U651 963 aa23.35■■□□□ 1.33
TNRC18-208ENST00000455076 MCTP2Q6DN12 878 aa23.35■■□□□ 1.33
TNRC18-208ENST00000455076 PSRC1Q6PGN9 363 aaPredicted RBP23.35■■□□□ 1.33
TNRC18-208ENST00000455076 C16orf59Q7L2K0 433 aa23.35■■□□□ 1.33
TNRC18-208ENST00000455076 PHKBQ93100 1093 aa23.35■■□□□ 1.33
TNRC18-208ENST00000455076 GPR20Q99678 358 aa23.35■■□□□ 1.33
TNRC18-208ENST00000455076 JADE2Q9NQC1 790 aa23.35■■□□□ 1.33
TNRC18-208ENST00000455076 PDRG1Q9NUG6 133 aa23.35■■□□□ 1.33
TNRC18-208ENST00000455076 CYFIP1Q7L576 1253 aa23.34■■□□□ 1.33
TNRC18-208ENST00000455076 CRYGNQ8WXF5 182 aa23.34■■□□□ 1.33
TNRC18-208ENST00000455076 BUD13Q9BRD0 619 aaKnown RBP eCLIP23.34■■□□□ 1.331e-12■□□□□ 9.1
TNRC18-208ENST00000455076 BCAS3Q9H6U6 928 aa23.34■■□□□ 1.33
TNRC18-208ENST00000455076 NCOA5Q9HCD5 579 aaKnown RBP23.34■■□□□ 1.33
TNRC18-208ENST00000455076 IL23AQ9NPF7 189 aa23.34■■□□□ 1.33
TNRC18-208ENST00000455076 LGALS2P05162 132 aa23.33■■□□□ 1.33
TNRC18-208ENST00000455076 CYP2C9P11712 490 aa23.33■■□□□ 1.33
TNRC18-208ENST00000455076 HOXC8P31273 242 aa23.33■■□□□ 1.33
TNRC18-208ENST00000455076 CCT2P78371 535 aaKnown RBP23.33■■□□□ 1.33
TNRC18-208ENST00000455076 MTMR1Q13613 665 aa23.33■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms