RNA–Protein interactions for RNA: ENST00000454852.6

TRAF4-206, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 672 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-206ENST00000454852 HAS1Q92839 578 aa12.75□□□□□ -0.37
TRAF4-206ENST00000454852 SLC5A5Q92911 643 aa12.75□□□□□ -0.37
TRAF4-206ENST00000454852 FERMT2Q96AC1 680 aa12.75□□□□□ -0.37
TRAF4-206ENST00000454852 RIT2Q99578 217 aa12.75□□□□□ -0.37
TRAF4-206ENST00000454852 SENP7Q9BQF6 1050 aa12.75□□□□□ -0.37
TRAF4-206ENST00000454852 FTOQ9C0B1 505 aaKnown RBP eCLIP12.75□□□□□ -0.37
TRAF4-206ENST00000454852 TMEM60Q9H2L4 133 aa12.75□□□□□ -0.37
TRAF4-206ENST00000454852 ABHD16BQ9H3Z7 469 aa12.75□□□□□ -0.37
TRAF4-206ENST00000454852 KCNH7Q9NS40 1196 aa12.75□□□□□ -0.37
TRAF4-206ENST00000454852 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.75□□□□□ -0.37
TRAF4-206ENST00000454852 TFIP11Q9UBB9 837 aaKnown RBP12.75□□□□□ -0.37
TRAF4-206ENST00000454852 GABRQQ9UN88 632 aa12.75□□□□□ -0.37
TRAF4-206ENST00000454852 CNPY2Q9Y2B0 182 aa12.75□□□□□ -0.37
TRAF4-206ENST00000454852 NFASCO94856 1347 aa12.74□□□□□ -0.37
TRAF4-206ENST00000454852 SPTLC2O15270 562 aa12.74□□□□□ -0.37
TRAF4-206ENST00000454852 CYP2B6P20813 491 aa12.74□□□□□ -0.37
TRAF4-206ENST00000454852 FXR2P51116 673 aaKnown RBP eCLIP12.74□□□□□ -0.37
TRAF4-206ENST00000454852 SEMA3FQ13275 785 aa12.74□□□□□ -0.37
TRAF4-206ENST00000454852 MTMR1Q13613 665 aa12.74□□□□□ -0.37
TRAF4-206ENST00000454852 STK38Q15208 465 aa12.74□□□□□ -0.37
TRAF4-206ENST00000454852 CALCRLQ16602 461 aa12.74□□□□□ -0.37
TRAF4-206ENST00000454852 B3GNT9Q6UX72 402 aa12.74□□□□□ -0.37
TRAF4-206ENST00000454852 ZNF579Q8NAF0 562 aaKnown RBP12.74□□□□□ -0.37
TRAF4-206ENST00000454852 CHAMP1Q96JM3 812 aa12.74□□□□□ -0.37
TRAF4-206ENST00000454852 SPATA32Q96LK8 384 aa12.74□□□□□ -0.37
TRAF4-206ENST00000454852 AGO4Q9HCK5 861 aaKnown RBP12.74□□□□□ -0.37
TRAF4-206ENST00000454852 FLRT1Q9NZU1 646 aa12.74□□□□□ -0.37
TRAF4-206ENST00000454852 FBXO2Q9UK22 296 aaPredicted RBP12.74□□□□□ -0.37
TRAF4-206ENST00000454852 SRPRBQ9Y5M8 271 aaKnown RBP12.74□□□□□ -0.37
TRAF4-206ENST00000454852 MCM3APO60318 1980 aa12.73□□□□□ -0.37
TRAF4-206ENST00000454852 DHX15O43143 795 aaKnown RBP12.73□□□□□ -0.37
TRAF4-206ENST00000454852 PSMD10O75832 226 aa12.73□□□□□ -0.37
TRAF4-206ENST00000454852 ARP10275 920 aa12.73□□□□□ -0.37
TRAF4-206ENST00000454852 HSPA8P11142 646 aaKnown RBP12.73□□□□□ -0.37
TRAF4-206ENST00000454852 KCNA2P16389 499 aa12.73□□□□□ -0.37
TRAF4-206ENST00000454852 PDIA5Q14554 519 aa12.73□□□□□ -0.37
TRAF4-206ENST00000454852 FOXD4L6Q3SYB3 417 aaPredicted RBP12.73□□□□□ -0.37
TRAF4-206ENST00000454852 AXDND1Q5T1B0 1012 aaPredicted RBP12.73□□□□□ -0.37
TRAF4-206ENST00000454852 TAPT1Q6NXT6 567 aa12.73□□□□□ -0.37
TRAF4-206ENST00000454852 CCDC62Q6P9F0 684 aa12.73□□□□□ -0.37
TRAF4-206ENST00000454852 FOXD4L3Q6VB84 417 aaPredicted RBP12.73□□□□□ -0.37
TRAF4-206ENST00000454852 OTOP1Q7RTM1 612 aa12.73□□□□□ -0.37
TRAF4-206ENST00000454852 GIMAP8Q8ND71 665 aaPredicted RBP12.73□□□□□ -0.37
TRAF4-206ENST00000454852 SCFD2Q8WU76 684 aa12.73□□□□□ -0.37
TRAF4-206ENST00000454852 WDR11Q9BZH6 1224 aa12.73□□□□□ -0.37
TRAF4-206ENST00000454852 TBC1D22BQ9NU19 505 aa12.73□□□□□ -0.37
TRAF4-206ENST00000454852 IPO5O00410 1097 aaKnown RBP12.72□□□□□ -0.37
TRAF4-206ENST00000454852 ZNF865P0CJ78 1059 aaPredicted RBP12.72□□□□□ -0.37
TRAF4-206ENST00000454852 CEBPZQ03701 1054 aaKnown RBP12.72□□□□□ -0.37
TRAF4-206ENST00000454852 SPIRE1Q08AE8 756 aa12.72□□□□□ -0.37
TRAF4-206ENST00000454852 PPP2R5CQ13362 524 aa12.72□□□□□ -0.37
TRAF4-206ENST00000454852 ACVR2BQ13705 512 aa12.72□□□□□ -0.37
TRAF4-206ENST00000454852 CCL14Q16627 93 aa12.72□□□□□ -0.37
TRAF4-206ENST00000454852 MAP3K21Q5TCX8 1036 aa12.72□□□□□ -0.37
TRAF4-206ENST00000454852 ADALQ6DHV7 355 aa12.72□□□□□ -0.37
TRAF4-206ENST00000454852 DTHD1Q6ZMT9 781 aa12.72□□□□□ -0.37
TRAF4-206ENST00000454852 IGSF22Q8N9C0 903 aa12.72□□□□□ -0.37
TRAF4-206ENST00000454852 KRI1Q8N9T8 703 aaKnown RBP12.72□□□□□ -0.37
TRAF4-206ENST00000454852 TRIB2Q92519 343 aa12.72□□□□□ -0.37
TRAF4-206ENST00000454852 AK8Q96MA6 479 aa12.72□□□□□ -0.37
TRAF4-206ENST00000454852 ZNF577Q9BSK1 485 aa12.72□□□□□ -0.37
TRAF4-206ENST00000454852 DDX41Q9UJV9 622 aaKnown RBP12.72□□□□□ -0.37
TRAF4-206ENST00000454852 VAV3Q9UKW4 847 aa12.72□□□□□ -0.37
TRAF4-206ENST00000454852 PCNTO95613 3336 aa12.72□□□□□ -0.37
TRAF4-206ENST00000454852 FAM237AA0A1B0GTK4 181 aa12.71□□□□□ -0.37
TRAF4-206ENST00000454852 A0A1W2PQ27 194 aa12.71□□□□□ -0.37
TRAF4-206ENST00000454852 A0A1W2PQ64 194 aa12.71□□□□□ -0.37
TRAF4-206ENST00000454852 A0A1W2PQD8 194 aa12.71□□□□□ -0.37
TRAF4-206ENST00000454852 NKRFO15226 690 aaKnown RBP eCLIP12.71□□□□□ -0.374e-10■□□□□ 8.2
TRAF4-206ENST00000454852 SLC26A4O43511 780 aa12.71□□□□□ -0.37
TRAF4-206ENST00000454852 CUTAO60888 179 aa12.71□□□□□ -0.37
TRAF4-206ENST00000454852 NCLP19338 710 aaKnown RBP12.71□□□□□ -0.37
TRAF4-206ENST00000454852 LONP1P36776 959 aaKnown RBP12.71□□□□□ -0.37
TRAF4-206ENST00000454852 CTCFP49711 727 aaPredicted RBP12.71□□□□□ -0.37
TRAF4-206ENST00000454852 ITGB3BPQ13352 177 aaPredicted RBP12.71□□□□□ -0.37
TRAF4-206ENST00000454852 NEDD9Q14511 834 aa12.71□□□□□ -0.37
TRAF4-206ENST00000454852 TTLL4Q14679 1199 aa12.71□□□□□ -0.37
TRAF4-206ENST00000454852 IL17AQ16552 155 aa12.71□□□□□ -0.37
TRAF4-206ENST00000454852 MFSD14CQ5VZR4 134 aa12.71□□□□□ -0.37
TRAF4-206ENST00000454852 IQSEC1Q6DN90 963 aa12.71□□□□□ -0.37
TRAF4-206ENST00000454852 FBXO16Q8IX29 292 aaPredicted RBP12.71□□□□□ -0.37
TRAF4-206ENST00000454852 SLAIN1Q8ND83 568 aa12.71□□□□□ -0.37
TRAF4-206ENST00000454852 EMID1Q96A84 441 aaPredicted RBP12.71□□□□□ -0.37
TRAF4-206ENST00000454852 TSKSQ9UJT2 592 aa12.71□□□□□ -0.37
TRAF4-206ENST00000454852 PCDHA7Q9UN72 937 aa12.71□□□□□ -0.37
TRAF4-206ENST00000454852 PCDHA12Q9UN75 941 aa12.71□□□□□ -0.37
TRAF4-206ENST00000454852 MRVI1Q9Y6F6 885 aa12.71□□□□□ -0.37
TRAF4-206ENST00000454852 DDX49Q9Y6V7 483 aaKnown RBP12.71□□□□□ -0.37
TRAF4-206ENST00000454852 CEP350Q5VT06 3117 aa12.71□□□□□ -0.37
TRAF4-206ENST00000454852 FOXN1O15353 648 aa12.7□□□□□ -0.38
TRAF4-206ENST00000454852 ADCY3O60266 1144 aa12.7□□□□□ -0.38
TRAF4-206ENST00000454852 ATP9AO75110 1047 aa12.7□□□□□ -0.38
TRAF4-206ENST00000454852 HMGCRP04035 888 aa12.7□□□□□ -0.38
TRAF4-206ENST00000454852 HSPA1AP0DMV8 641 aaKnown RBP12.7□□□□□ -0.38
TRAF4-206ENST00000454852 HSPA1BP0DMV9 641 aaKnown RBP12.7□□□□□ -0.38
TRAF4-206ENST00000454852 CYBAP13498 195 aa12.7□□□□□ -0.38
TRAF4-206ENST00000454852 UBA1P22314 1058 aaKnown RBP12.7□□□□□ -0.38
TRAF4-206ENST00000454852 MARCKSP29966 332 aaPredicted RBP12.7□□□□□ -0.38
TRAF4-206ENST00000454852 TXKP42681 527 aa12.7□□□□□ -0.38
TRAF4-206ENST00000454852 TMEM266Q2M3C6 531 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms