RNA–Protein interactions for RNA: ENST00000454591.6

ECHDC1-209, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 2 BASIC

Gene ECHDC1, Length 1,515 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-209ENST00000454591 ZDHHC15Q96MV8 337 aa13.9□□□□□ -0.19
ECHDC1-209ENST00000454591 NUDT12Q9BQG2 462 aa13.9□□□□□ -0.19
ECHDC1-209ENST00000454591 IDI2Q9BXS1 227 aa13.9□□□□□ -0.19
ECHDC1-209ENST00000454591 ACBD3Q9H3P7 528 aa13.9□□□□□ -0.19
ECHDC1-209ENST00000454591 SH2D4AQ9H788 454 aa13.9□□□□□ -0.19
ECHDC1-209ENST00000454591 GPCPD1Q9NPB8 672 aa13.9□□□□□ -0.19
ECHDC1-209ENST00000454591 ARHGAP20Q9P2F6 1191 aa13.9□□□□□ -0.19
ECHDC1-209ENST00000454591 SYNPO2Q9UMS6 1093 aa13.9□□□□□ -0.19
ECHDC1-209ENST00000454591 JRKLQ9Y4A0 524 aa13.9□□□□□ -0.19
ECHDC1-209ENST00000454591 PCDHA2Q9Y5H9 948 aa13.9□□□□□ -0.19
ECHDC1-209ENST00000454591 ALDH1B1P30837 517 aa13.89□□□□□ -0.19
ECHDC1-209ENST00000454591 TNNI2P48788 182 aa13.89□□□□□ -0.19
ECHDC1-209ENST00000454591 AARSP49588 968 aaKnown RBP eCLIP13.89□□□□□ -0.19
ECHDC1-209ENST00000454591 FKBP3Q00688 224 aaKnown RBP13.89□□□□□ -0.19
ECHDC1-209ENST00000454591 MAP9Q49MG5 647 aa13.89□□□□□ -0.19
ECHDC1-209ENST00000454591 FAM26FQ5R3K3 315 aa13.89□□□□□ -0.19
ECHDC1-209ENST00000454591 NCAPH2Q6IBW4 605 aa13.89□□□□□ -0.19
ECHDC1-209ENST00000454591 IQCEQ6IPM2 695 aa13.89□□□□□ -0.19
ECHDC1-209ENST00000454591 PDXDC1Q6P996 788 aa13.89□□□□□ -0.19
ECHDC1-209ENST00000454591 MMGT1Q8N4V1 131 aa13.89□□□□□ -0.19
ECHDC1-209ENST00000454591 SECISBP2LQ93073 1101 aaKnown RBP13.89□□□□□ -0.19
ECHDC1-209ENST00000454591 ZC3H12CQ9C0D7 883 aaKnown RBP13.89□□□□□ -0.19
ECHDC1-209ENST00000454591 ZSWIM4Q9H7M6 989 aa13.89□□□□□ -0.19
ECHDC1-209ENST00000454591 PSTPIP2Q9H939 334 aa13.89□□□□□ -0.19
ECHDC1-209ENST00000454591 PCDHA12Q9UN75 941 aa13.89□□□□□ -0.19
ECHDC1-209ENST00000454591 COL4A3BPQ9Y5P4 624 aa13.89□□□□□ -0.19
ECHDC1-209ENST00000454591 ATP8B3O60423 1300 aa13.89□□□□□ -0.19
ECHDC1-209ENST00000454591 H3BQF6 201 aa13.88□□□□□ -0.19
ECHDC1-209ENST00000454591 TACC1O75410 805 aa13.88□□□□□ -0.19
ECHDC1-209ENST00000454591 PICALMQ13492 652 aa13.88□□□□□ -0.19
ECHDC1-209ENST00000454591 EDRF1Q3B7T1 1238 aa13.88□□□□□ -0.19
ECHDC1-209ENST00000454591 PODNQ7Z5L7 613 aa13.88□□□□□ -0.19
ECHDC1-209ENST00000454591 CCDC65Q8IXS2 484 aa13.88□□□□□ -0.19
ECHDC1-209ENST00000454591 SLFN12Q8IYM2 578 aa13.88□□□□□ -0.19
ECHDC1-209ENST00000454591 RNF10Q8N5U6 811 aaKnown RBP13.88□□□□□ -0.19
ECHDC1-209ENST00000454591 MMS19Q96T76 1030 aa13.88□□□□□ -0.19
ECHDC1-209ENST00000454591 MED4Q9NPJ6 270 aa13.88□□□□□ -0.19
ECHDC1-209ENST00000454591 BMP2KQ9NSY1 1161 aaPredicted RBP13.88□□□□□ -0.19
ECHDC1-209ENST00000454591 CEP72Q9P209 647 aa13.88□□□□□ -0.19
ECHDC1-209ENST00000454591 FAM184BQ9ULE4 1060 aa13.88□□□□□ -0.19
ECHDC1-209ENST00000454591 SNX12Q9UMY4 172 aa13.88□□□□□ -0.19
ECHDC1-209ENST00000454591 PCDHA13Q9Y5I0 950 aa13.88□□□□□ -0.19
ECHDC1-209ENST00000454591 BRWD3Q6RI45 1802 aa13.88□□□□□ -0.19
ECHDC1-209ENST00000454591 AFF2P51816 1311 aa13.88□□□□□ -0.19
ECHDC1-209ENST00000454591 USP17L10C9JJH3 530 aa13.87□□□□□ -0.19
ECHDC1-209ENST00000454591 NKRFO15226 690 aaKnown RBP eCLIP13.87□□□□□ -0.19
ECHDC1-209ENST00000454591 KIF11P52732 1056 aa13.87□□□□□ -0.19
ECHDC1-209ENST00000454591 CASP8Q14790 479 aa13.87□□□□□ -0.19
ECHDC1-209ENST00000454591 ECM1Q16610 540 aa13.87□□□□□ -0.19
ECHDC1-209ENST00000454591 UBE2SQ16763 222 aa13.87□□□□□ -0.19
ECHDC1-209ENST00000454591 Q4G0T1 1027 aa13.87□□□□□ -0.19
ECHDC1-209ENST00000454591 MUM1L1Q5H9M0 696 aa13.87□□□□□ -0.19
ECHDC1-209ENST00000454591 TTBK2Q6IQ55 1244 aa13.87□□□□□ -0.19
ECHDC1-209ENST00000454591 TATDN1Q6P1N9 297 aa13.87□□□□□ -0.19
ECHDC1-209ENST00000454591 DYMQ7RTS9 669 aa13.87□□□□□ -0.19
ECHDC1-209ENST00000454591 TRIM59Q8IWR1 403 aa13.87□□□□□ -0.19
ECHDC1-209ENST00000454591 NLGN1Q8N2Q7 840 aa13.87□□□□□ -0.19
ECHDC1-209ENST00000454591 GMCL1P1Q8NEA9 526 aa13.87□□□□□ -0.19
ECHDC1-209ENST00000454591 FAM71BQ8TC56 605 aa13.87□□□□□ -0.19
ECHDC1-209ENST00000454591 HPS3Q969F9 1004 aa13.87□□□□□ -0.19
ECHDC1-209ENST00000454591 DNAJC18Q9H819 358 aa13.87□□□□□ -0.19
ECHDC1-209ENST00000454591 KANSL2Q9H9L4 492 aa13.87□□□□□ -0.19
ECHDC1-209ENST00000454591 PANK4Q9NVE7 773 aa13.87□□□□□ -0.19
ECHDC1-209ENST00000454591 CALCOCO1Q9P1Z2 691 aa13.87□□□□□ -0.19
ECHDC1-209ENST00000454591 EPHB6O15197 1021 aa13.86□□□□□ -0.19
ECHDC1-209ENST00000454591 CLSTN1O94985 981 aa13.86□□□□□ -0.19
ECHDC1-209ENST00000454591 FOSP01100 380 aaPredicted RBP13.86□□□□□ -0.19
ECHDC1-209ENST00000454591 RHOXF2BP0C7M4 288 aa13.86□□□□□ -0.19
ECHDC1-209ENST00000454591 TCP1P17987 556 aaKnown RBP13.86□□□□□ -0.19
ECHDC1-209ENST00000454591 CIITAP33076 1130 aa13.86□□□□□ -0.19
ECHDC1-209ENST00000454591 KCNMA1Q12791 1236 aa13.86□□□□□ -0.19
ECHDC1-209ENST00000454591 QRICH1Q2TAL8 776 aa13.86□□□□□ -0.19
ECHDC1-209ENST00000454591 HGSNATQ68CP4 663 aa13.86□□□□□ -0.19
ECHDC1-209ENST00000454591 NEK11Q8NG66 645 aa13.86□□□□□ -0.19
ECHDC1-209ENST00000454591 PCMTD1Q96MG8 357 aaPredicted RBP13.86□□□□□ -0.19
ECHDC1-209ENST00000454591 RHOXF2Q9BQY4 288 aa13.86□□□□□ -0.19
ECHDC1-209ENST00000454591 IFIH1Q9BYX4 1025 aaKnown RBP13.86□□□□□ -0.19
ECHDC1-209ENST00000454591 KCTD10Q9H3F6 313 aa13.86□□□□□ -0.19
ECHDC1-209ENST00000454591 TSKSQ9UJT2 592 aa13.86□□□□□ -0.19
ECHDC1-209ENST00000454591 PSME4Q14997 1843 aa13.85□□□□□ -0.19
ECHDC1-209ENST00000454591 ATRNL1Q5VV63 1379 aa13.85□□□□□ -0.19
ECHDC1-209ENST00000454591 TFRCP02786 760 aaKnown RBP13.85□□□□□ -0.19
ECHDC1-209ENST00000454591 CYP11B2P19099 503 aa13.85□□□□□ -0.19
ECHDC1-209ENST00000454591 PDE6BP35913 854 aa13.85□□□□□ -0.19
ECHDC1-209ENST00000454591 EIF4A3P38919 411 aaKnown RBP13.85□□□□□ -0.19
ECHDC1-209ENST00000454591 CRKP46108 304 aa13.85□□□□□ -0.19
ECHDC1-209ENST00000454591 SPIRE1Q08AE8 756 aa13.85□□□□□ -0.19
ECHDC1-209ENST00000454591 CCDC96Q2M329 555 aa13.85□□□□□ -0.19
ECHDC1-209ENST00000454591 BTNL9Q6UXG8 535 aa13.85□□□□□ -0.19
ECHDC1-209ENST00000454591 ETNPPLQ8TBG4 499 aa13.85□□□□□ -0.19
ECHDC1-209ENST00000454591 GMCL1Q96IK5 515 aa13.85□□□□□ -0.19
ECHDC1-209ENST00000454591 ANO3Q9BYT9 981 aa13.85□□□□□ -0.19
ECHDC1-209ENST00000454591 HDAC6Q9UBN7 1215 aa13.85□□□□□ -0.19
ECHDC1-209ENST00000454591 RNF14Q9UBS8 474 aa13.85□□□□□ -0.19
ECHDC1-209ENST00000454591 LRRC53A6NM62 1247 aa13.85□□□□□ -0.19
ECHDC1-209ENST00000454591 BTNL10A8MVZ5 291 aa13.85□□□□□ -0.19
ECHDC1-209ENST00000454591 MEIS2O14770 477 aa13.85□□□□□ -0.19
ECHDC1-209ENST00000454591 PLA2G4BP0C869 781 aa13.85□□□□□ -0.19
ECHDC1-209ENST00000454591 IDEP14735 1019 aa13.85□□□□□ -0.19
ECHDC1-209ENST00000454591 TNFRSF8P28908 595 aa13.85□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms