RNA–Protein interactions for RNA: ENST00000454258.2

AC006539.3-201, humanhuman

BASIC

Gene AC006539.3, Length 129 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC006539.3-201ENST00000454258 DYDC1Q8WWB3 177 aa3.79□□□□□ -1.8
AC006539.3-201ENST00000454258 TATDN2Q93075 761 aa3.79□□□□□ -1.8
AC006539.3-201ENST00000454258 HVCN1Q96D96 273 aa3.79□□□□□ -1.8
AC006539.3-201ENST00000454258 PGM2Q96G03 612 aa3.79□□□□□ -1.8
AC006539.3-201ENST00000454258 ACSBG1Q96GR2 724 aa3.79□□□□□ -1.8
AC006539.3-201ENST00000454258 TRIM47Q96LD4 638 aa3.79□□□□□ -1.8
AC006539.3-201ENST00000454258 TCEANC2Q96MN5 208 aa3.79□□□□□ -1.8
AC006539.3-201ENST00000454258 CCDC43Q96MW1 224 aaKnown RBP3.79□□□□□ -1.8
AC006539.3-201ENST00000454258 OLFM3Q96PB7 478 aa3.79□□□□□ -1.8
AC006539.3-201ENST00000454258 MMS19Q96T76 1030 aa3.79□□□□□ -1.8
AC006539.3-201ENST00000454258 TSG101Q99816 390 aa3.79□□□□□ -1.8
AC006539.3-201ENST00000454258 TUBB6Q9BUF5 446 aa3.79□□□□□ -1.8
AC006539.3-201ENST00000454258 PLVAPQ9BX97 442 aa3.79□□□□□ -1.8
AC006539.3-201ENST00000454258 RAB34Q9BZG1 259 aa3.79□□□□□ -1.8
AC006539.3-201ENST00000454258 FTOQ9C0B1 505 aaKnown RBP eCLIP3.79□□□□□ -1.8
AC006539.3-201ENST00000454258 TMBIM4Q9HC24 238 aa3.79□□□□□ -1.8
AC006539.3-201ENST00000454258 UTP3Q9NQZ2 479 aaKnown RBP eCLIP3.79□□□□□ -1.8
AC006539.3-201ENST00000454258 USP40Q9NVE5 1235 aa3.79□□□□□ -1.8
AC006539.3-201ENST00000454258 RGL1Q9NZL6 768 aa3.79□□□□□ -1.8
AC006539.3-201ENST00000454258 AIPL1Q9NZN9 384 aa3.79□□□□□ -1.8
AC006539.3-201ENST00000454258 PDP2Q9P2J9 529 aa3.79□□□□□ -1.8
AC006539.3-201ENST00000454258 MTRF1LQ9UGC7 380 aaKnown RBP3.79□□□□□ -1.8
AC006539.3-201ENST00000454258 SLC12A6Q9UHW9 1150 aa3.79□□□□□ -1.8
AC006539.3-201ENST00000454258 HDAC9Q9UKV0 1011 aa3.79□□□□□ -1.8
AC006539.3-201ENST00000454258 PLAGL2Q9UPG8 496 aa3.79□□□□□ -1.8
AC006539.3-201ENST00000454258 SSX2IPQ9Y2D8 614 aa3.79□□□□□ -1.8
AC006539.3-201ENST00000454258 EPB41L3Q9Y2J2 1087 aaPredicted RBP3.79□□□□□ -1.8
AC006539.3-201ENST00000454258 UTP11Q9Y3A2 253 aaKnown RBP3.79□□□□□ -1.8
AC006539.3-201ENST00000454258 MAFBQ9Y5Q3 323 aaPredicted RBP3.79□□□□□ -1.8
AC006539.3-201ENST00000454258 GMEB1Q9Y692 573 aa3.79□□□□□ -1.8
AC006539.3-201ENST00000454258 DYNC1LI1Q9Y6G9 523 aaKnown RBP3.79□□□□□ -1.8
AC006539.3-201ENST00000454258 SLC4A7Q9Y6M7 1214 aa3.79□□□□□ -1.8
AC006539.3-201ENST00000454258 MYH8P13535 1937 aa3.79□□□□□ -1.8
AC006539.3-201ENST00000454258 KIF13BQ9NQT8 1826 aa3.79□□□□□ -1.8
AC006539.3-201ENST00000454258 SCN11AQ9UI33 1791 aa3.79□□□□□ -1.8
AC006539.3-201ENST00000454258 ARAP2Q8WZ64 1704 aa3.78□□□□□ -1.8
AC006539.3-201ENST00000454258 MARF1Q9Y4F3 1742 aaKnown RBP3.78□□□□□ -1.8
AC006539.3-201ENST00000454258 METP08581 1390 aa3.78□□□□□ -1.8
AC006539.3-201ENST00000454258 MYH2Q9UKX2 1941 aa3.78□□□□□ -1.8
AC006539.3-201ENST00000454258 MROH7Q68CQ1 1323 aa3.78□□□□□ -1.8
AC006539.3-201ENST00000454258 A0A087WZG4 1122 aa3.78□□□□□ -1.8
AC006539.3-201ENST00000454258 CCT8L1PA6NM43 557 aa3.78□□□□□ -1.8
AC006539.3-201ENST00000454258 MYO1FO00160 1098 aa3.78□□□□□ -1.8
AC006539.3-201ENST00000454258 CREB3O43889 395 aa3.78□□□□□ -1.8
AC006539.3-201ENST00000454258 ORC4O43929 436 aa3.78□□□□□ -1.8
AC006539.3-201ENST00000454258 DCTN3O75935 186 aa3.78□□□□□ -1.8
AC006539.3-201ENST00000454258 SMNDC1O75940 238 aaKnown RBP eCLIP3.78□□□□□ -1.8
AC006539.3-201ENST00000454258 DDAH1O94760 285 aa3.78□□□□□ -1.8
AC006539.3-201ENST00000454258 GGPS1O95749 300 aa3.78□□□□□ -1.8
AC006539.3-201ENST00000454258 RECKO95980 971 aa3.78□□□□□ -1.8
AC006539.3-201ENST00000454258 MYBL2P10244 700 aa3.78□□□□□ -1.8
AC006539.3-201ENST00000454258 IMPDH2P12268 514 aa3.78□□□□□ -1.8
AC006539.3-201ENST00000454258 ACADSP16219 412 aa3.78□□□□□ -1.8
AC006539.3-201ENST00000454258 SCP2P22307 547 aa3.78□□□□□ -1.8
AC006539.3-201ENST00000454258 ALDH3A1P30838 453 aa3.78□□□□□ -1.8
AC006539.3-201ENST00000454258 MAN1A1P33908 653 aa3.78□□□□□ -1.8
AC006539.3-201ENST00000454258 STAT6P42226 847 aa3.78□□□□□ -1.8
AC006539.3-201ENST00000454258 PAPOLAP51003 745 aaKnown RBP3.78□□□□□ -1.8
AC006539.3-201ENST00000454258 FXR1P51114 621 aaKnown RBP eCLIP3.78□□□□□ -1.8
AC006539.3-201ENST00000454258 KIF11P52732 1056 aa3.78□□□□□ -1.8
AC006539.3-201ENST00000454258 RAB15P59190 212 aa3.78□□□□□ -1.8
AC006539.3-201ENST00000454258 ZC3H6P61129 1189 aaKnown RBP3.78□□□□□ -1.8
AC006539.3-201ENST00000454258 ERVK-24P63145 666 aa3.78□□□□□ -1.8
AC006539.3-201ENST00000454258 ATP2C1P98194 919 aaPredicted RBP3.78□□□□□ -1.8
AC006539.3-201ENST00000454258 GUCY1B3Q02153 619 aa3.78□□□□□ -1.8
AC006539.3-201ENST00000454258 FMR1Q06787 632 aaKnown RBP eCLIP3.78□□□□□ -1.8
AC006539.3-201ENST00000454258 KLC1Q07866 573 aa3.78□□□□□ -1.8
AC006539.3-201ENST00000454258 MYO1EQ12965 1108 aa3.78□□□□□ -1.8
AC006539.3-201ENST00000454258 NR1H3Q13133 447 aa3.78□□□□□ -1.8
AC006539.3-201ENST00000454258 LAMB3Q13751 1172 aa3.78□□□□□ -1.8
AC006539.3-201ENST00000454258 DHX34Q14147 1143 aaKnown RBP3.78□□□□□ -1.8
AC006539.3-201ENST00000454258 ELOAQ14241 798 aaKnown RBP3.78□□□□□ -1.8
AC006539.3-201ENST00000454258 HLTFQ14527 1009 aaKnown RBP eCLIP3.78□□□□□ -1.8
AC006539.3-201ENST00000454258 PDIA5Q14554 519 aa3.78□□□□□ -1.8
AC006539.3-201ENST00000454258 KPNB1Q14974 876 aaKnown RBP3.78□□□□□ -1.8
AC006539.3-201ENST00000454258 PPP1R7Q15435 360 aa3.78□□□□□ -1.8
AC006539.3-201ENST00000454258 PARP6Q2NL67 630 aa3.78□□□□□ -1.8
AC006539.3-201ENST00000454258 NAALADL2Q58DX5 795 aa3.78□□□□□ -1.8
AC006539.3-201ENST00000454258 TTMPQ5BVD1 217 aa3.78□□□□□ -1.8
AC006539.3-201ENST00000454258 TMEM67Q5HYA8 995 aa3.78□□□□□ -1.8
AC006539.3-201ENST00000454258 TMEM164Q5U3C3 297 aa3.78□□□□□ -1.8
AC006539.3-201ENST00000454258 PRPF38BQ5VTL8 546 aaKnown RBP3.78□□□□□ -1.8
AC006539.3-201ENST00000454258 RRAGBQ5VZM2 374 aa3.78□□□□□ -1.8
AC006539.3-201ENST00000454258 CDCA2Q69YH5 1023 aaPredicted RBP3.78□□□□□ -1.8
AC006539.3-201ENST00000454258 ZNF530Q6P9A1 599 aaPredicted RBP3.78□□□□□ -1.8
AC006539.3-201ENST00000454258 CCDC174Q6PII3 467 aa3.78□□□□□ -1.8
AC006539.3-201ENST00000454258 FOXR1Q6PIV2 292 aa3.78□□□□□ -1.8
AC006539.3-201ENST00000454258 PPP1R21Q6ZMI0 780 aa3.78□□□□□ -1.8
AC006539.3-201ENST00000454258 STOX1Q6ZVD7 989 aa3.78□□□□□ -1.8
AC006539.3-201ENST00000454258 NUDT18Q6ZVK8 323 aa3.78□□□□□ -1.8
AC006539.3-201ENST00000454258 UNC13DQ70J99 1090 aa3.78□□□□□ -1.8
AC006539.3-201ENST00000454258 ZNF365Q70YC5 407 aa3.78□□□□□ -1.8
AC006539.3-201ENST00000454258 DDX46Q7L014 1031 aaKnown RBP3.78□□□□□ -1.8
AC006539.3-201ENST00000454258 BZW1Q7L1Q6 419 aaKnown RBP3.78□□□□□ -1.8
AC006539.3-201ENST00000454258 LCA5Q86VQ0 697 aa3.78□□□□□ -1.8
AC006539.3-201ENST00000454258 DZIP3Q86Y13 1208 aaKnown RBP3.78□□□□□ -1.8
AC006539.3-201ENST00000454258 CREG2Q8IUH2 290 aa3.78□□□□□ -1.8
AC006539.3-201ENST00000454258 RBM12BQ8IXT5 1001 aaKnown RBP3.78□□□□□ -1.8
AC006539.3-201ENST00000454258 TTC5Q8N0Z6 440 aa3.78□□□□□ -1.8
AC006539.3-201ENST00000454258 AGGF1Q8N302 714 aaeCLIP3.78□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms