RNA–Protein interactions for RNA: ENST00000453854.1

HMGB1P15-201, Transcript of high mobility group box 1 pseudogene 15, humanhuman

BASIC

Gene HMGB1P15, Length 435 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P15-201ENST00000453854 PPARGC1AQ9UBK2 798 aaKnown RBP5.12□□□□□ -1.59
HMGB1P15-201ENST00000453854 EBF1Q9UH73 591 aa5.12□□□□□ -1.59
HMGB1P15-201ENST00000453854 G3BP2Q9UN86 482 aaKnown RBP5.12□□□□□ -1.59
HMGB1P15-201ENST00000453854 APOBEC2Q9Y235 224 aaKnown RBP5.12□□□□□ -1.59
HMGB1P15-201ENST00000453854 CCDC180Q9P1Z9 1646 aa5.12□□□□□ -1.59
HMGB1P15-201ENST00000453854 K7ESF4 209 aa5.11□□□□□ -1.59
HMGB1P15-201ENST00000453854 PPP1R11O60927 126 aaPredicted RBP5.11□□□□□ -1.59
HMGB1P15-201ENST00000453854 KATNA1O75449 491 aa5.11□□□□□ -1.59
HMGB1P15-201ENST00000453854 ID4P47928 161 aa5.11□□□□□ -1.59
HMGB1P15-201ENST00000453854 LSSP48449 732 aa5.11□□□□□ -1.59
HMGB1P15-201ENST00000453854 EPHB1P54762 984 aa5.11□□□□□ -1.59
HMGB1P15-201ENST00000453854 CORO7P57737 925 aa5.11□□□□□ -1.59
HMGB1P15-201ENST00000453854 JAG1P78504 1218 aa5.11□□□□□ -1.59
HMGB1P15-201ENST00000453854 FZD5Q13467 585 aa5.11□□□□□ -1.59
HMGB1P15-201ENST00000453854 TTF1Q15361 905 aaPredicted RBP5.11□□□□□ -1.59
HMGB1P15-201ENST00000453854 FAM47CQ5HY64 1035 aa5.11□□□□□ -1.59
HMGB1P15-201ENST00000453854 CCDC181Q5TID7 509 aa5.11□□□□□ -1.59
HMGB1P15-201ENST00000453854 CREB3L3Q68CJ9 461 aa5.11□□□□□ -1.59
HMGB1P15-201ENST00000453854 SLCO6A1Q86UG4 719 aa5.11□□□□□ -1.59
HMGB1P15-201ENST00000453854 HHIPL1Q96JK4 782 aa5.11□□□□□ -1.59
HMGB1P15-201ENST00000453854 TRIM8Q9BZR9 551 aa5.11□□□□□ -1.59
HMGB1P15-201ENST00000453854 CABP5Q9NP86 173 aa5.11□□□□□ -1.59
HMGB1P15-201ENST00000453854 CBLCQ9ULV8 474 aa5.11□□□□□ -1.59
HMGB1P15-201ENST00000453854 EID1Q9Y6B2 187 aa5.11□□□□□ -1.59
HMGB1P15-201ENST00000453854 X6R8D5 127 aa5.11□□□□□ -1.59
HMGB1P15-201ENST00000453854 A0A1W2PQ45 241 aaPredicted RBP5.1□□□□□ -1.59
HMGB1P15-201ENST00000453854 A0A1W2PQY0 241 aa5.1□□□□□ -1.59
HMGB1P15-201ENST00000453854 ZNF561-AS1K7EIQ3 104 aa5.1□□□□□ -1.59
HMGB1P15-201ENST00000453854 FKBP9O95302 570 aa5.1□□□□□ -1.59
HMGB1P15-201ENST00000453854 PYGMP11217 842 aa5.1□□□□□ -1.59
HMGB1P15-201ENST00000453854 ATP2A2P16615 1042 aaKnown RBP5.1□□□□□ -1.59
HMGB1P15-201ENST00000453854 KIR2DL1P43626 348 aaPredicted RBP5.1□□□□□ -1.59
HMGB1P15-201ENST00000453854 KIR2DL2P43627 348 aaPredicted RBP5.1□□□□□ -1.59
HMGB1P15-201ENST00000453854 ARHGAP44Q17R89 818 aa5.1□□□□□ -1.59
HMGB1P15-201ENST00000453854 FKBP9P1Q75LS8 142 aa5.1□□□□□ -1.59
HMGB1P15-201ENST00000453854 CERS3Q8IU89 383 aa5.1□□□□□ -1.59
HMGB1P15-201ENST00000453854 PLEKHO2Q8TD55 490 aa5.1□□□□□ -1.59
HMGB1P15-201ENST00000453854 TMEM169Q96HH4 297 aa5.1□□□□□ -1.59
HMGB1P15-201ENST00000453854 MTA3Q9BTC8 594 aa5.1□□□□□ -1.59
HMGB1P15-201ENST00000453854 MENTQ9BUN1 341 aa5.1□□□□□ -1.59
HMGB1P15-201ENST00000453854 RC3H2Q9HBD1 1191 aaKnown RBP5.1□□□□□ -1.59
HMGB1P15-201ENST00000453854 EMC7Q9NPA0 242 aa5.1□□□□□ -1.59
HMGB1P15-201ENST00000453854 PRDM7Q9NQW5 492 aa5.1□□□□□ -1.59
HMGB1P15-201ENST00000453854 CLDND1Q9NY35 253 aa5.1□□□□□ -1.59
HMGB1P15-201ENST00000453854 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP5.1□□□□□ -1.59
HMGB1P15-201ENST00000453854 PTPDC1A2A3K4 754 aa5.09□□□□□ -1.59
HMGB1P15-201ENST00000453854 WTIPA6NIX2 430 aaPredicted RBP5.09□□□□□ -1.59
HMGB1P15-201ENST00000453854 GAS7O60861 476 aa5.09□□□□□ -1.59
HMGB1P15-201ENST00000453854 AMY2AP04746 511 aa5.09□□□□□ -1.59
HMGB1P15-201ENST00000453854 ZGLP1P0C6A0 271 aa5.09□□□□□ -1.59
HMGB1P15-201ENST00000453854 ZBTB48P10074 688 aaPredicted RBP5.09□□□□□ -1.59
HMGB1P15-201ENST00000453854 PDE6AP16499 860 aa5.09□□□□□ -1.59
HMGB1P15-201ENST00000453854 AMY2BP19961 511 aa5.09□□□□□ -1.59
HMGB1P15-201ENST00000453854 DNM2P50570 870 aa5.09□□□□□ -1.59
HMGB1P15-201ENST00000453854 ST5P78524 1137 aa5.09□□□□□ -1.59
HMGB1P15-201ENST00000453854 TMPRSS15P98073 1019 aa5.09□□□□□ -1.59
HMGB1P15-201ENST00000453854 OCRLQ01968 901 aa5.09□□□□□ -1.59
HMGB1P15-201ENST00000453854 MCL1Q07820 350 aa5.09□□□□□ -1.59
HMGB1P15-201ENST00000453854 DUSP4Q13115 394 aa5.09□□□□□ -1.59
HMGB1P15-201ENST00000453854 SART3Q15020 963 aaKnown RBP5.09□□□□□ -1.59
HMGB1P15-201ENST00000453854 NFE2Q16621 373 aaPredicted RBP5.09□□□□□ -1.59
HMGB1P15-201ENST00000453854 ZNF648Q5T619 568 aaPredicted RBP5.09□□□□□ -1.59
HMGB1P15-201ENST00000453854 HHIPL2Q6UWX4 724 aa5.09□□□□□ -1.59
HMGB1P15-201ENST00000453854 CEP68Q76N32 757 aa5.09□□□□□ -1.59
HMGB1P15-201ENST00000453854 RIOX2Q8IUF8 465 aa5.09□□□□□ -1.59
HMGB1P15-201ENST00000453854 RAVER1Q8IY67 606 aaKnown RBP5.09□□□□□ -1.59
HMGB1P15-201ENST00000453854 CHTF18Q8WVB6 975 aa5.09□□□□□ -1.59
HMGB1P15-201ENST00000453854 JMJD8Q96S16 334 aa5.09□□□□□ -1.59
HMGB1P15-201ENST00000453854 JAM3Q9BX67 310 aa5.09□□□□□ -1.59
HMGB1P15-201ENST00000453854 SMURF1Q9HCE7 757 aa5.09□□□□□ -1.59
HMGB1P15-201ENST00000453854 ZKSCAN5Q9Y2L8 839 aa5.09□□□□□ -1.59
HMGB1P15-201ENST00000453854 FAN1Q9Y2M0 1017 aa5.09□□□□□ -1.59
HMGB1P15-201ENST00000453854 TCRBV5S4A2TA0A5A2 114 aa5.08□□□□□ -1.6
HMGB1P15-201ENST00000453854 NOTOA8MTQ0 251 aa5.08□□□□□ -1.6
HMGB1P15-201ENST00000453854 GABRDO14764 452 aa5.08□□□□□ -1.6
HMGB1P15-201ENST00000453854 IL2P60568 153 aa5.08□□□□□ -1.6
HMGB1P15-201ENST00000453854 ITKQ08881 620 aa5.08□□□□□ -1.6
HMGB1P15-201ENST00000453854 FAPQ12884 760 aa5.08□□□□□ -1.6
HMGB1P15-201ENST00000453854 GPR19Q15760 415 aa5.08□□□□□ -1.6
HMGB1P15-201ENST00000453854 CRY1Q16526 586 aa5.08□□□□□ -1.6
HMGB1P15-201ENST00000453854 INAVAQ3KP66 663 aa5.08□□□□□ -1.6
HMGB1P15-201ENST00000453854 SYDE2Q5VT97 1194 aa5.08□□□□□ -1.6
HMGB1P15-201ENST00000453854 NOL8Q76FK4 1167 aaKnown RBP5.08□□□□□ -1.6
HMGB1P15-201ENST00000453854 OTOP3Q7RTS5 596 aa5.08□□□□□ -1.6
HMGB1P15-201ENST00000453854 OSTM1Q86WC4 334 aa5.08□□□□□ -1.6
HMGB1P15-201ENST00000453854 FMNL3Q8IVF7 1028 aa5.08□□□□□ -1.6
HMGB1P15-201ENST00000453854 EFHBQ8N7U6 833 aa5.08□□□□□ -1.6
HMGB1P15-201ENST00000453854 CNTD1Q8N815 330 aa5.08□□□□□ -1.6
HMGB1P15-201ENST00000453854 C2orf69Q8N8R5 385 aa5.08□□□□□ -1.6
HMGB1P15-201ENST00000453854 COG1Q8WTW3 980 aa5.08□□□□□ -1.6
HMGB1P15-201ENST00000453854 CHAMP1Q96JM3 812 aa5.08□□□□□ -1.6
HMGB1P15-201ENST00000453854 GPR101Q96P66 508 aaPredicted RBP5.08□□□□□ -1.6
HMGB1P15-201ENST00000453854 CCDC8Q9H0W5 538 aaPredicted RBP5.08□□□□□ -1.6
HMGB1P15-201ENST00000453854 ADAMTS10Q9H324 1103 aa5.08□□□□□ -1.6
HMGB1P15-201ENST00000453854 EPB41L1Q9H4G0 881 aa5.08□□□□□ -1.6
HMGB1P15-201ENST00000453854 CARS2Q9HA77 564 aaKnown RBP5.08□□□□□ -1.6
HMGB1P15-201ENST00000453854 CATSPERZQ9NTU4 200 aa5.08□□□□□ -1.6
HMGB1P15-201ENST00000453854 SPTLC3Q9NUV7 552 aa5.08□□□□□ -1.6
HMGB1P15-201ENST00000453854 THG1LQ9NWX6 298 aaKnown RBP5.08□□□□□ -1.6
HMGB1P15-201ENST00000453854 GULP1Q9UBP9 304 aa5.08□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 107.5 ms