RNA–Protein interactions for RNA: ENST00000453555.1

CDC42EP3-203, Transcript of CDC42 effector protein 3, humanhuman

TSL 3

Gene CDC42EP3, Length 953 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP3-203ENST00000453555 ANKRD33Q7Z3H0 272 aa10.92□□□□□ -0.66
CDC42EP3-203ENST00000453555 TDHQ8IZJ6 230 aa10.92□□□□□ -0.66
CDC42EP3-203ENST00000453555 SAMD3Q8N6K7 520 aa10.92□□□□□ -0.66
CDC42EP3-203ENST00000453555 IL31RAQ8NI17 732 aa10.92□□□□□ -0.66
CDC42EP3-203ENST00000453555 PPP1R13LQ8WUF5 828 aa10.92□□□□□ -0.66
CDC42EP3-203ENST00000453555 KCNB2Q92953 911 aa10.92□□□□□ -0.66
CDC42EP3-203ENST00000453555 PDCD2LQ9BRP1 358 aa10.92□□□□□ -0.66
CDC42EP3-203ENST00000453555 GRIN2DO15399 1336 aa10.91□□□□□ -0.66
CDC42EP3-203ENST00000453555 MROH7Q68CQ1 1323 aa10.91□□□□□ -0.66
CDC42EP3-203ENST00000453555 GOLGA8AA7E2F4 631 aa10.91□□□□□ -0.66
CDC42EP3-203ENST00000453555 GOLGA8BA8MQT2 603 aa10.91□□□□□ -0.66
CDC42EP3-203ENST00000453555 KIAA0355O15063 1070 aa10.91□□□□□ -0.66
CDC42EP3-203ENST00000453555 SORBS3O60504 671 aa10.91□□□□□ -0.66
CDC42EP3-203ENST00000453555 EIF3JO75822 258 aaKnown RBP10.91□□□□□ -0.66
CDC42EP3-203ENST00000453555 CABYRO75952 493 aa10.91□□□□□ -0.66
CDC42EP3-203ENST00000453555 CCND2P30279 289 aa10.91□□□□□ -0.66
CDC42EP3-203ENST00000453555 CHMP4BP1P59074 171 aa10.91□□□□□ -0.66
CDC42EP3-203ENST00000453555 LSM11P83369 360 aaKnown RBP eCLIP10.91□□□□□ -0.66
CDC42EP3-203ENST00000453555 PURAQ00577 322 aaKnown RBP10.91□□□□□ -0.66
CDC42EP3-203ENST00000453555 APOBRQ0VD83 1088 aa10.91□□□□□ -0.66
CDC42EP3-203ENST00000453555 RTN1Q16799 776 aa10.91□□□□□ -0.66
CDC42EP3-203ENST00000453555 PPP1R15BQ5SWA1 713 aa10.91□□□□□ -0.66
CDC42EP3-203ENST00000453555 CCDC62Q6P9F0 684 aa10.91□□□□□ -0.66
CDC42EP3-203ENST00000453555 USP17L6PQ6QN14 398 aa10.91□□□□□ -0.66
CDC42EP3-203ENST00000453555 BLOC1S2Q6QNY1 142 aa10.91□□□□□ -0.66
CDC42EP3-203ENST00000453555 SMARCC2Q8TAQ2 1214 aa10.91□□□□□ -0.66
CDC42EP3-203ENST00000453555 GPKOWQ92917 476 aaPredicted RBP eCLIP10.91□□□□□ -0.66
CDC42EP3-203ENST00000453555 CUL5Q93034 780 aa10.91□□□□□ -0.66
CDC42EP3-203ENST00000453555 TOX2Q96NM4 488 aa10.91□□□□□ -0.66
CDC42EP3-203ENST00000453555 POLR3EQ9NVU0 708 aa10.91□□□□□ -0.66
CDC42EP3-203ENST00000453555 RBM28Q9NW13 759 aaKnown RBP10.91□□□□□ -0.66
CDC42EP3-203ENST00000453555 MRVI1Q9Y6F6 885 aa10.91□□□□□ -0.66
CDC42EP3-203ENST00000453555 SCN10AQ9Y5Y9 1956 aa10.9□□□□□ -0.66
CDC42EP3-203ENST00000453555 A6NJR5 290 aa10.9□□□□□ -0.66
CDC42EP3-203ENST00000453555 TLR3O15455 904 aaKnown RBP10.9□□□□□ -0.66
CDC42EP3-203ENST00000453555 RGS20O76081 388 aa10.9□□□□□ -0.66
CDC42EP3-203ENST00000453555 GH1P01241 217 aa10.9□□□□□ -0.66
CDC42EP3-203ENST00000453555 CASTP20810 708 aaKnown RBP10.9□□□□□ -0.66
CDC42EP3-203ENST00000453555 RPS6KB1P23443 525 aa10.9□□□□□ -0.66
CDC42EP3-203ENST00000453555 CDC27P30260 824 aa10.9□□□□□ -0.66
CDC42EP3-203ENST00000453555 ARHGAP1Q07960 439 aa10.9□□□□□ -0.66
CDC42EP3-203ENST00000453555 BRDTQ58F21 947 aaPredicted RBP10.9□□□□□ -0.66
CDC42EP3-203ENST00000453555 HEATR3Q7Z4Q2 680 aa10.9□□□□□ -0.66
CDC42EP3-203ENST00000453555 VSIG10LQ86VR7 867 aa10.9□□□□□ -0.66
CDC42EP3-203ENST00000453555 FAM126BQ8IXS8 530 aa10.9□□□□□ -0.66
CDC42EP3-203ENST00000453555 SLC43A3Q8NBI5 491 aa10.9□□□□□ -0.66
CDC42EP3-203ENST00000453555 AFG1LQ8WV93 481 aa10.9□□□□□ -0.66
CDC42EP3-203ENST00000453555 BRF1Q92994 677 aa10.9□□□□□ -0.66
CDC42EP3-203ENST00000453555 LRCH3Q96II8 777 aa10.9□□□□□ -0.66
CDC42EP3-203ENST00000453555 PPP1R12CQ9BZL4 782 aa10.9□□□□□ -0.66
CDC42EP3-203ENST00000453555 DDX41Q9UJV9 622 aaKnown RBP10.9□□□□□ -0.66
CDC42EP3-203ENST00000453555 CNTNAP5Q8WYK1 1306 aa10.89□□□□□ -0.67
CDC42EP3-203ENST00000453555 TRIP12Q14669 1992 aaPredicted RBP10.89□□□□□ -0.67
CDC42EP3-203ENST00000453555 MEIS2O14770 477 aa10.89□□□□□ -0.67
CDC42EP3-203ENST00000453555 CD4P01730 458 aa10.89□□□□□ -0.67
CDC42EP3-203ENST00000453555 PSMA5P28066 241 aa10.89□□□□□ -0.67
CDC42EP3-203ENST00000453555 SHHQ15465 462 aa10.89□□□□□ -0.67
CDC42EP3-203ENST00000453555 UBE2SQ16763 222 aa10.89□□□□□ -0.67
CDC42EP3-203ENST00000453555 FAM47CQ5HY64 1035 aa10.89□□□□□ -0.67
CDC42EP3-203ENST00000453555 C9orf50Q5SZB4 431 aa10.89□□□□□ -0.67
CDC42EP3-203ENST00000453555 DHX37Q8IY37 1157 aaKnown RBP10.89□□□□□ -0.67
CDC42EP3-203ENST00000453555 MTG1Q9BT17 334 aaPredicted RBP10.89□□□□□ -0.67
CDC42EP3-203ENST00000453555 USP26Q9BXU7 913 aa10.89□□□□□ -0.67
CDC42EP3-203ENST00000453555 TRPV6Q9H1D0 765 aa10.89□□□□□ -0.67
CDC42EP3-203ENST00000453555 PSTPIP2Q9H939 334 aa10.89□□□□□ -0.67
CDC42EP3-203ENST00000453555 FAM217BQ9NTX9 383 aaPredicted RBP10.89□□□□□ -0.67
CDC42EP3-203ENST00000453555 RTEL1Q9NZ71 1219 aa10.89□□□□□ -0.67
CDC42EP3-203ENST00000453555 TBX21Q9UL17 535 aa10.89□□□□□ -0.67
CDC42EP3-203ENST00000453555 V9GY48 417 aaPredicted RBP10.89□□□□□ -0.67
CDC42EP3-203ENST00000453555 SCN5AQ14524 2016 aa10.89□□□□□ -0.67
CDC42EP3-203ENST00000453555 B4GALT4O60513 344 aa10.88□□□□□ -0.67
CDC42EP3-203ENST00000453555 TIMP1P01033 207 aa10.88□□□□□ -0.67
CDC42EP3-203ENST00000453555 MMP3P08254 477 aa10.88□□□□□ -0.67
CDC42EP3-203ENST00000453555 CYP2C18P33260 490 aa10.88□□□□□ -0.67
CDC42EP3-203ENST00000453555 ADD1P35611 737 aaKnown RBP10.88□□□□□ -0.67
CDC42EP3-203ENST00000453555 PBX2P40425 430 aa10.88□□□□□ -0.67
CDC42EP3-203ENST00000453555 METAP2P50579 478 aaKnown RBP eCLIP10.88□□□□□ -0.67
CDC42EP3-203ENST00000453555 EPHB4P54760 987 aa10.88□□□□□ -0.67
CDC42EP3-203ENST00000453555 MRPS9P82933 396 aaKnown RBP10.88□□□□□ -0.67
CDC42EP3-203ENST00000453555 SP2Q02086 613 aa10.88□□□□□ -0.67
CDC42EP3-203ENST00000453555 FPGSQ05932 587 aa10.88□□□□□ -0.67
CDC42EP3-203ENST00000453555 NBPF20Q3BBV1 942 aa10.88□□□□□ -0.67
CDC42EP3-203ENST00000453555 WWC2Q6AWC2 1192 aa10.88□□□□□ -0.67
CDC42EP3-203ENST00000453555 OXER1Q8TDS5 423 aa10.88□□□□□ -0.67
CDC42EP3-203ENST00000453555 RNF166Q96A37 237 aaPredicted RBP10.88□□□□□ -0.67
CDC42EP3-203ENST00000453555 FRMPD4Q14CM0 1322 aa10.87□□□□□ -0.67
CDC42EP3-203ENST00000453555 PIK3CDO00329 1044 aa10.87□□□□□ -0.67
CDC42EP3-203ENST00000453555 KPNA6O60684 536 aa10.87□□□□□ -0.67
CDC42EP3-203ENST00000453555 PPFIA3O75145 1194 aa10.87□□□□□ -0.67
CDC42EP3-203ENST00000453555 GGPS1O95749 300 aa10.87□□□□□ -0.67
CDC42EP3-203ENST00000453555 NAPAP54920 295 aa10.87□□□□□ -0.67
CDC42EP3-203ENST00000453555 FUT2Q10981 343 aa10.87□□□□□ -0.67
CDC42EP3-203ENST00000453555 LAMC2Q13753 1193 aa10.87□□□□□ -0.67
CDC42EP3-203ENST00000453555 LRIT3Q3SXY7 679 aa10.87□□□□□ -0.67
CDC42EP3-203ENST00000453555 KCNV1Q6PIU1 500 aa10.87□□□□□ -0.67
CDC42EP3-203ENST00000453555 RUFY3Q7L099 469 aa10.87□□□□□ -0.67
CDC42EP3-203ENST00000453555 ALDH8A1Q9H2A2 487 aaPredicted RBP10.87□□□□□ -0.67
CDC42EP3-203ENST00000453555 BCAS3Q9H6U6 928 aa10.87□□□□□ -0.67
CDC42EP3-203ENST00000453555 TRMT13Q9NUP7 481 aaKnown RBP10.87□□□□□ -0.67
CDC42EP3-203ENST00000453555 RANBP2P49792 3224 aaKnown RBP10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms