RNA–Protein interactions for RNA: ENST00000453056.5

VPS8-213, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 3

Gene VPS8, Length 661 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-213ENST00000453056 GTF3C3Q9Y5Q9 886 aa17.74■□□□□ 0.43
VPS8-213ENST00000453056 STK36Q9NRP7 1315 aa17.73■□□□□ 0.43
VPS8-213ENST00000453056 ARVCFO00192 962 aa17.73■□□□□ 0.43
VPS8-213ENST00000453056 GGPS1O95749 300 aa17.73■□□□□ 0.43
VPS8-213ENST00000453056 ICAM3P32942 547 aa17.73■□□□□ 0.43
VPS8-213ENST00000453056 RBM25P49756 843 aaKnown RBP17.73■□□□□ 0.43
VPS8-213ENST00000453056 PURAQ00577 322 aaKnown RBP17.73■□□□□ 0.43
VPS8-213ENST00000453056 NEDD9Q14511 834 aa17.73■□□□□ 0.43
VPS8-213ENST00000453056 ANKRD33Q7Z3H0 272 aa17.73■□□□□ 0.43
VPS8-213ENST00000453056 PPTC7Q8NI37 304 aa17.73■□□□□ 0.43
VPS8-213ENST00000453056 GPRASP2Q96D09 838 aa17.73■□□□□ 0.43
VPS8-213ENST00000453056 TOX2Q96NM4 488 aa17.73■□□□□ 0.43
VPS8-213ENST00000453056 PRDM5Q9NQX1 630 aaPredicted RBP17.73■□□□□ 0.43
VPS8-213ENST00000453056 VPS54Q9P1Q0 977 aa17.73■□□□□ 0.43
VPS8-213ENST00000453056 DOCK5Q9H7D0 1870 aa17.73■□□□□ 0.43
VPS8-213ENST00000453056 TLR3O15455 904 aaKnown RBP17.72■□□□□ 0.43
VPS8-213ENST00000453056 MMP3P08254 477 aa17.72■□□□□ 0.43
VPS8-213ENST00000453056 CLTBP09497 229 aa17.72■□□□□ 0.43
VPS8-213ENST00000453056 SYN1P17600 705 aa17.72■□□□□ 0.43
VPS8-213ENST00000453056 DGKDQ16760 1214 aa17.72■□□□□ 0.43
VPS8-213ENST00000453056 CELF3Q5SZQ8 465 aaKnown RBP17.72■□□□□ 0.43
VPS8-213ENST00000453056 GTF3C6Q969F1 213 aa17.72■□□□□ 0.43
VPS8-213ENST00000453056 ZFP91Q96JP5 570 aaPredicted RBP17.72■□□□□ 0.43
VPS8-213ENST00000453056 SPATA33Q96N06 139 aa17.72■□□□□ 0.43
VPS8-213ENST00000453056 LBHD1Q9BQE6 289 aaPredicted RBP17.72■□□□□ 0.43
VPS8-213ENST00000453056 MLXIPQ9HAP2 919 aa17.72■□□□□ 0.43
VPS8-213ENST00000453056 RTEL1Q9NZ71 1219 aa17.72■□□□□ 0.43
VPS8-213ENST00000453056 LTBP2Q14767 1821 aa17.71■□□□□ 0.43
VPS8-213ENST00000453056 SPATA31C2B4DYI2 1134 aa17.71■□□□□ 0.43
VPS8-213ENST00000453056 NOP56O00567 594 aaKnown RBP17.71■□□□□ 0.43
VPS8-213ENST00000453056 XBP1P17861 261 aa17.71■□□□□ 0.43
VPS8-213ENST00000453056 SREBF1P36956 1147 aa17.71■□□□□ 0.43
VPS8-213ENST00000453056 CLK2P49760 499 aaKnown RBP17.71■□□□□ 0.43
VPS8-213ENST00000453056 NLRP5P59047 1200 aa17.71■□□□□ 0.43
VPS8-213ENST00000453056 ITGA7Q13683 1181 aa17.71■□□□□ 0.43
VPS8-213ENST00000453056 RABEP1Q15276 862 aa17.71■□□□□ 0.43
VPS8-213ENST00000453056 JAKMIP3Q5VZ66 844 aa17.71■□□□□ 0.43
VPS8-213ENST00000453056 METTL7BQ6UX53 244 aa17.71■□□□□ 0.43
VPS8-213ENST00000453056 GIMAP8Q8ND71 665 aaPredicted RBP17.71■□□□□ 0.43
VPS8-213ENST00000453056 WASF1Q92558 559 aa17.71■□□□□ 0.43
VPS8-213ENST00000453056 PDLIM7Q9NR12 457 aa17.71■□□□□ 0.43
VPS8-213ENST00000453056 ZNF76P36508 570 aa17.7■□□□□ 0.42
VPS8-213ENST00000453056 MTMR1Q13613 665 aa17.7■□□□□ 0.42
VPS8-213ENST00000453056 ME3Q16798 604 aa17.7■□□□□ 0.42
VPS8-213ENST00000453056 MYSM1Q5VVJ2 828 aa17.7■□□□□ 0.42
VPS8-213ENST00000453056 GALNT17Q6IS24 598 aa17.7■□□□□ 0.42
VPS8-213ENST00000453056 CHRDL2Q6WN34 429 aa17.7■□□□□ 0.42
VPS8-213ENST00000453056 IL27Q8NEV9 243 aa17.7■□□□□ 0.42
VPS8-213ENST00000453056 PGBD1Q96JS3 809 aa17.7■□□□□ 0.42
VPS8-213ENST00000453056 SENP7Q9BQF6 1050 aa17.7■□□□□ 0.42
VPS8-213ENST00000453056 KATNAL1Q9BW62 490 aa17.7■□□□□ 0.42
VPS8-213ENST00000453056 TMEM260Q9NX78 707 aa17.7■□□□□ 0.42
VPS8-213ENST00000453056 LIMCH1Q9UPQ0 1083 aa17.7■□□□□ 0.42
VPS8-213ENST00000453056 UBIAD1Q9Y5Z9 338 aa17.7■□□□□ 0.42
VPS8-213ENST00000453056 KAT6AQ92794 2004 aa17.69■□□□□ 0.42
VPS8-213ENST00000453056 MAGEA10P43363 369 aaPredicted RBP17.69■□□□□ 0.42
VPS8-213ENST00000453056 CDK7P50613 346 aa17.69■□□□□ 0.42
VPS8-213ENST00000453056 PSMC6P62333 389 aa17.69■□□□□ 0.42
VPS8-213ENST00000453056 ARHGAP4P98171 946 aa17.69■□□□□ 0.42
VPS8-213ENST00000453056 SEMA3FQ13275 785 aa17.69■□□□□ 0.42
VPS8-213ENST00000453056 NECAB1Q8N987 351 aa17.69■□□□□ 0.42
VPS8-213ENST00000453056 SLC43A3Q8NBI5 491 aa17.69■□□□□ 0.42
VPS8-213ENST00000453056 JADE2Q9NQC1 790 aa17.69■□□□□ 0.42
VPS8-213ENST00000453056 TMEM39AQ9NV64 488 aa17.69■□□□□ 0.42
VPS8-213ENST00000453056 ORC3Q9UBD5 711 aaPredicted RBP17.69■□□□□ 0.42
VPS8-213ENST00000453056 RANBP2P49792 3224 aaKnown RBP17.68■□□□□ 0.42
VPS8-213ENST00000453056 MAFGO15525 162 aa17.68■□□□□ 0.42
VPS8-213ENST00000453056 ST18O60284 1047 aa17.68■□□□□ 0.42
VPS8-213ENST00000453056 SORBS3O60504 671 aa17.68■□□□□ 0.42
VPS8-213ENST00000453056 LARGE1O95461 756 aa17.68■□□□□ 0.42
VPS8-213ENST00000453056 HOXD8P13378 290 aaPredicted RBP17.68■□□□□ 0.42
VPS8-213ENST00000453056 ITGB5P18084 799 aa17.68■□□□□ 0.42
VPS8-213ENST00000453056 SP2Q02086 613 aa17.68■□□□□ 0.42
VPS8-213ENST00000453056 CEP55Q53EZ4 464 aa17.68■□□□□ 0.42
VPS8-213ENST00000453056 FAM47CQ5HY64 1035 aa17.68■□□□□ 0.42
VPS8-213ENST00000453056 NFRKBQ6P4R8 1299 aa17.68■□□□□ 0.42
VPS8-213ENST00000453056 FAM126BQ8IXS8 530 aa17.68■□□□□ 0.42
VPS8-213ENST00000453056 MXRA8Q9BRK3 442 aa17.68■□□□□ 0.42
VPS8-213ENST00000453056 SH2B1Q9NRF2 756 aaPredicted RBP17.68■□□□□ 0.42
VPS8-213ENST00000453056 PCDHA4Q9UN74 947 aa17.68■□□□□ 0.42
VPS8-213ENST00000453056 KIAA0355O15063 1070 aa17.67■□□□□ 0.42
VPS8-213ENST00000453056 PPFIA4O75335 1185 aa17.67■□□□□ 0.42
VPS8-213ENST00000453056 ZNF286BP0CG31 522 aa17.67■□□□□ 0.42
VPS8-213ENST00000453056 RAG1P15918 1043 aa17.67■□□□□ 0.42
VPS8-213ENST00000453056 CHMP4BP1P59074 171 aa17.67■□□□□ 0.42
VPS8-213ENST00000453056 SETQ01105 290 aaPredicted RBP17.67■□□□□ 0.42
VPS8-213ENST00000453056 CYFIP1Q7L576 1253 aa17.67■□□□□ 0.42
VPS8-213ENST00000453056 NIPA1Q7RTP0 329 aa17.67■□□□□ 0.42
VPS8-213ENST00000453056 DAGLBQ8NCG7 672 aa17.67■□□□□ 0.42
VPS8-213ENST00000453056 ZSCAN31Q96LW9 406 aaPredicted RBP17.67■□□□□ 0.42
VPS8-213ENST00000453056 KIF2CQ99661 725 aa17.67■□□□□ 0.42
VPS8-213ENST00000453056 F2P00734 622 aa17.66■□□□□ 0.42
VPS8-213ENST00000453056 SUPT20HL2P0C7V6 817 aa17.66■□□□□ 0.42
VPS8-213ENST00000453056 KCNA2P16389 499 aa17.66■□□□□ 0.42
VPS8-213ENST00000453056 MDM2Q00987 491 aaPredicted RBP17.66■□□□□ 0.42
VPS8-213ENST00000453056 PTPN11Q06124 597 aaPredicted RBP17.66■□□□□ 0.42
VPS8-213ENST00000453056 FAAP100Q0VG06 881 aa17.66■□□□□ 0.42
VPS8-213ENST00000453056 NBPF20Q3BBV1 942 aa17.66■□□□□ 0.42
VPS8-213ENST00000453056 HSDL1Q3SXM5 330 aa17.66■□□□□ 0.42
VPS8-213ENST00000453056 BLIDQ8IZY5 108 aa17.66■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms