RNA–Protein interactions for RNA: ENST00000451823.2

HMGB3P22-202, Transcript of high mobility group box 3 pseudogene 22, humanhuman

BASIC

Gene HMGB3P22, Length 572 nt, Biotype transcribed processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P22-202ENST00000451823 ERC2O15083 957 aa4.92□□□□□ -1.62
HMGB3P22-202ENST00000451823 FYB1O15117 783 aa4.92□□□□□ -1.62
HMGB3P22-202ENST00000451823 AP5Z1O43299 807 aa4.92□□□□□ -1.62
HMGB3P22-202ENST00000451823 FOXD2O60548 495 aaPredicted RBP4.92□□□□□ -1.62
HMGB3P22-202ENST00000451823 DIAPH1O60610 1272 aaKnown RBP4.92□□□□□ -1.62
HMGB3P22-202ENST00000451823 USP2O75604 605 aaPredicted RBP4.92□□□□□ -1.62
HMGB3P22-202ENST00000451823 UBOX5O94941 541 aa4.92□□□□□ -1.62
HMGB3P22-202ENST00000451823 ADCY5O95622 1261 aa4.92□□□□□ -1.62
HMGB3P22-202ENST00000451823 HMGB1P09429 215 aaKnown RBP4.92□□□□□ -1.62
HMGB3P22-202ENST00000451823 HSP90B1P14625 803 aaKnown RBP4.92□□□□□ -1.62
HMGB3P22-202ENST00000451823 MX1P20591 662 aa4.92□□□□□ -1.62
HMGB3P22-202ENST00000451823 PCBP3P57721 371 aaKnown RBP4.92□□□□□ -1.62
HMGB3P22-202ENST00000451823 GNAI1P63096 354 aa4.92□□□□□ -1.62
HMGB3P22-202ENST00000451823 NCBP1Q09161 790 aaKnown RBP4.92□□□□□ -1.62
HMGB3P22-202ENST00000451823 MLECQ14165 292 aa4.92□□□□□ -1.62
HMGB3P22-202ENST00000451823 MPP2Q14168 576 aa4.92□□□□□ -1.62
HMGB3P22-202ENST00000451823 NFE2L2Q16236 605 aa4.92□□□□□ -1.62
HMGB3P22-202ENST00000451823 NBPF9Q3BBW0 867 aa4.92□□□□□ -1.62
HMGB3P22-202ENST00000451823 CCDC183Q5T5S1 534 aa4.92□□□□□ -1.62
HMGB3P22-202ENST00000451823 CEP85Q6P2H3 762 aa4.92□□□□□ -1.62
HMGB3P22-202ENST00000451823 CEP128Q6ZU80 1094 aa4.92□□□□□ -1.62
HMGB3P22-202ENST00000451823 SND1Q7KZF4 910 aaKnown RBP eCLIP4.92□□□□□ -1.62
HMGB3P22-202ENST00000451823 TMC3Q7Z5M5 1100 aa4.92□□□□□ -1.62
HMGB3P22-202ENST00000451823 C16orf71Q8IYS4 520 aaPredicted RBP4.92□□□□□ -1.62
HMGB3P22-202ENST00000451823 SYTL5Q8TDW5 730 aaPredicted RBP4.92□□□□□ -1.62
HMGB3P22-202ENST00000451823 OTUD7AQ8TE49 926 aaPredicted RBP4.92□□□□□ -1.62
HMGB3P22-202ENST00000451823 TTC12Q9H892 705 aaPredicted RBP4.92□□□□□ -1.62
HMGB3P22-202ENST00000451823 BRMS1Q9HCU9 246 aa4.92□□□□□ -1.62
HMGB3P22-202ENST00000451823 DDX41Q9UJV9 622 aaKnown RBP4.92□□□□□ -1.62
HMGB3P22-202ENST00000451823 TCFL5Q9UL49 500 aa4.92□□□□□ -1.62
HMGB3P22-202ENST00000451823 PREX1Q8TCU6 1659 aa4.92□□□□□ -1.62
HMGB3P22-202ENST00000451823 CRYBG1Q9Y4K1 1723 aa4.92□□□□□ -1.62
HMGB3P22-202ENST00000451823 DLG5Q8TDM6 1919 aa4.91□□□□□ -1.62
HMGB3P22-202ENST00000451823 N4BP2Q86UW6 1770 aaPredicted RBP4.91□□□□□ -1.62
HMGB3P22-202ENST00000451823 TULP2O00295 520 aa4.91□□□□□ -1.62
HMGB3P22-202ENST00000451823 NRDCO43847 1150 aa4.91□□□□□ -1.62
HMGB3P22-202ENST00000451823 FKTNO75072 461 aa4.91□□□□□ -1.62
HMGB3P22-202ENST00000451823 SYPP08247 313 aa4.91□□□□□ -1.62
HMGB3P22-202ENST00000451823 RAG1P15918 1043 aa4.91□□□□□ -1.62
HMGB3P22-202ENST00000451823 GARTP22102 1010 aa4.91□□□□□ -1.62
HMGB3P22-202ENST00000451823 U2AF2P26368 475 aaKnown RBP eCLIP4.91□□□□□ -1.62
HMGB3P22-202ENST00000451823 SNW1Q13573 536 aaKnown RBP4.91□□□□□ -1.62
HMGB3P22-202ENST00000451823 PWP1Q13610 501 aa4.91□□□□□ -1.62
HMGB3P22-202ENST00000451823 KIR3DS1Q14943 382 aa4.91□□□□□ -1.62
HMGB3P22-202ENST00000451823 VMACQ2NL98 169 aa4.91□□□□□ -1.62
HMGB3P22-202ENST00000451823 NBPF12Q5TAG4 269 aaPredicted RBP4.91□□□□□ -1.62
HMGB3P22-202ENST00000451823 TMCO4Q5TGY1 634 aa4.91□□□□□ -1.62
HMGB3P22-202ENST00000451823 FBXL19Q6PCT2 694 aa4.91□□□□□ -1.62
HMGB3P22-202ENST00000451823 REC114Q7Z4M0 266 aa4.91□□□□□ -1.62
HMGB3P22-202ENST00000451823 USP48Q86UV5 1035 aa4.91□□□□□ -1.62
HMGB3P22-202ENST00000451823 CREBRFQ8IUR6 639 aa4.91□□□□□ -1.62
HMGB3P22-202ENST00000451823 C17orf53Q8N3J3 647 aaPredicted RBP4.91□□□□□ -1.62
HMGB3P22-202ENST00000451823 AFAP1Q8N556 730 aa4.91□□□□□ -1.62
HMGB3P22-202ENST00000451823 ZNF655Q8N720 491 aaPredicted RBP4.91□□□□□ -1.62
HMGB3P22-202ENST00000451823 LINC00116Q8NCU8 138 aa4.91□□□□□ -1.62
HMGB3P22-202ENST00000451823 ZNF830Q96NB3 372 aaPredicted RBP4.91□□□□□ -1.62
HMGB3P22-202ENST00000451823 KCNC2Q96PR1 638 aa4.91□□□□□ -1.62
HMGB3P22-202ENST00000451823 HDAC8Q9BY41 377 aa4.91□□□□□ -1.62
HMGB3P22-202ENST00000451823 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP4.91□□□□□ -1.62
HMGB3P22-202ENST00000451823 COPRSQ9NQ92 184 aa4.91□□□□□ -1.62
HMGB3P22-202ENST00000451823 VTI1BQ9UEU0 232 aa4.91□□□□□ -1.62
HMGB3P22-202ENST00000451823 MBD1Q9UIS9 605 aaPredicted RBP4.91□□□□□ -1.62
HMGB3P22-202ENST00000451823 PYCARDQ9ULZ3 195 aa4.91□□□□□ -1.62
HMGB3P22-202ENST00000451823 MINPP1Q9UNW1 487 aa4.91□□□□□ -1.62
HMGB3P22-202ENST00000451823 PCDHB14Q9Y5E9 798 aa4.91□□□□□ -1.62
HMGB3P22-202ENST00000451823 IRAK3Q9Y616 596 aa4.91□□□□□ -1.62
HMGB3P22-202ENST00000451823 WDR33Q9C0J8 1336 aaKnown RBP4.91□□□□□ -1.62
HMGB3P22-202ENST00000451823 NRKQ7Z2Y5 1582 aa4.91□□□□□ -1.62
HMGB3P22-202ENST00000451823 CHD1O14646 1710 aa4.9□□□□□ -1.62
HMGB3P22-202ENST00000451823 SIGLEC1Q9BZZ2 1709 aa4.9□□□□□ -1.62
HMGB3P22-202ENST00000451823 TMEM82A0PJX8 343 aa4.9□□□□□ -1.63
HMGB3P22-202ENST00000451823 SMTNL1A8MU46 457 aa4.9□□□□□ -1.63
HMGB3P22-202ENST00000451823 U2SURPO15042 1029 aaKnown RBP4.9□□□□□ -1.63
HMGB3P22-202ENST00000451823 SMARCA5O60264 1052 aaPredicted RBP4.9□□□□□ -1.63
HMGB3P22-202ENST00000451823 PTMAP06454 111 aaKnown RBP4.9□□□□□ -1.63
HMGB3P22-202ENST00000451823 PNLIPP16233 465 aa4.9□□□□□ -1.63
HMGB3P22-202ENST00000451823 PI3P19957 117 aa4.9□□□□□ -1.63
HMGB3P22-202ENST00000451823 VIPR1P32241 457 aa4.9□□□□□ -1.63
HMGB3P22-202ENST00000451823 KIR2DL1P43626 348 aaPredicted RBP4.9□□□□□ -1.63
HMGB3P22-202ENST00000451823 KIR2DL2P43627 348 aaPredicted RBP4.9□□□□□ -1.63
HMGB3P22-202ENST00000451823 PDE1AP54750 535 aa4.9□□□□□ -1.63
HMGB3P22-202ENST00000451823 RTP1P59025 263 aa4.9□□□□□ -1.63
HMGB3P22-202ENST00000451823 UBE2HP62256 183 aa4.9□□□□□ -1.63
HMGB3P22-202ENST00000451823 CASC1Q6TDU7 716 aa4.9□□□□□ -1.63
HMGB3P22-202ENST00000451823 DNAJC14Q6Y2X3 702 aaPredicted RBP4.9□□□□□ -1.63
HMGB3P22-202ENST00000451823 RBM43Q6ZSC3 357 aaKnown RBP4.9□□□□□ -1.63
HMGB3P22-202ENST00000451823 FAM196AQ6ZSG2 479 aa4.9□□□□□ -1.63
HMGB3P22-202ENST00000451823 C8orf58Q8NAV2 365 aa4.9□□□□□ -1.63
HMGB3P22-202ENST00000451823 HHIPL1Q96JK4 782 aa4.9□□□□□ -1.63
HMGB3P22-202ENST00000451823 TTC14Q96N46 770 aa4.9□□□□□ -1.63
HMGB3P22-202ENST00000451823 KRTAP4-5Q9BYR2 181 aa4.9□□□□□ -1.63
HMGB3P22-202ENST00000451823 PRDM14Q9GZV8 571 aa4.9□□□□□ -1.63
HMGB3P22-202ENST00000451823 CNTD2Q9H8S5 307 aa4.9□□□□□ -1.63
HMGB3P22-202ENST00000451823 CRTAC1Q9NQ79 661 aa4.9□□□□□ -1.63
HMGB3P22-202ENST00000451823 KCND1Q9NSA2 647 aa4.9□□□□□ -1.63
HMGB3P22-202ENST00000451823 KBTBD4Q9NVX7 518 aa4.9□□□□□ -1.63
HMGB3P22-202ENST00000451823 STAP2Q9UGK3 403 aa4.9□□□□□ -1.63
HMGB3P22-202ENST00000451823 AATKQ6ZMQ8 1374 aa4.9□□□□□ -1.63
HMGB3P22-202ENST00000451823 TCHHQ07283 1943 aa4.89□□□□□ -1.63
HMGB3P22-202ENST00000451823 YTHDC2Q9H6S0 1430 aaKnown RBP4.89□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms