RNA–Protein interactions for RNA: ENST00000451542.5

SMPD4-212, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 5

Gene SMPD4, Length 796 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-212ENST00000451542 SENP7Q9BQF6 1050 aa13.76□□□□□ -0.21
SMPD4-212ENST00000451542 VPS54Q9P1Q0 977 aa13.76□□□□□ -0.21
SMPD4-212ENST00000451542 MYH7BA7E2Y1 1941 aa13.75□□□□□ -0.21
SMPD4-212ENST00000451542 SPATA31C2B4DYI2 1134 aa13.75□□□□□ -0.21
SMPD4-212ENST00000451542 ARVCFO00192 962 aa13.75□□□□□ -0.21
SMPD4-212ENST00000451542 CTAGE5O15320 804 aa13.75□□□□□ -0.21
SMPD4-212ENST00000451542 PPFIA4O75335 1185 aa13.75□□□□□ -0.21
SMPD4-212ENST00000451542 ARIH2O95376 493 aa13.75□□□□□ -0.21
SMPD4-212ENST00000451542 GGPS1O95749 300 aa13.75□□□□□ -0.21
SMPD4-212ENST00000451542 MRPS9P82933 396 aaKnown RBP13.75□□□□□ -0.21
SMPD4-212ENST00000451542 ARHGAP1Q07960 439 aa13.75□□□□□ -0.21
SMPD4-212ENST00000451542 ME3Q16798 604 aa13.75□□□□□ -0.21
SMPD4-212ENST00000451542 TRIM60Q495X7 471 aa13.75□□□□□ -0.21
SMPD4-212ENST00000451542 CELF3Q5SZQ8 465 aaKnown RBP13.75□□□□□ -0.21
SMPD4-212ENST00000451542 JAKMIP3Q5VZ66 844 aa13.75□□□□□ -0.21
SMPD4-212ENST00000451542 PPTC7Q8NI37 304 aa13.75□□□□□ -0.21
SMPD4-212ENST00000451542 AFG1LQ8WV93 481 aa13.75□□□□□ -0.21
SMPD4-212ENST00000451542 COPS5Q92905 334 aa13.75□□□□□ -0.21
SMPD4-212ENST00000451542 SPATA33Q96N06 139 aa13.75□□□□□ -0.21
SMPD4-212ENST00000451542 KATNAL1Q9BW62 490 aa13.75□□□□□ -0.21
SMPD4-212ENST00000451542 BRMS1Q9HCU9 246 aa13.75□□□□□ -0.21
SMPD4-212ENST00000451542 SH2B1Q9NRF2 756 aaPredicted RBP13.75□□□□□ -0.21
SMPD4-212ENST00000451542 ORC3Q9UBD5 711 aaPredicted RBP13.75□□□□□ -0.21
SMPD4-212ENST00000451542 PQBP1O60828 265 aaKnown RBP13.74□□□□□ -0.21
SMPD4-212ENST00000451542 PPFIA3O75145 1194 aa13.74□□□□□ -0.21
SMPD4-212ENST00000451542 RGS20O76081 388 aa13.74□□□□□ -0.21
SMPD4-212ENST00000451542 MMP3P08254 477 aa13.74□□□□□ -0.21
SMPD4-212ENST00000451542 SREBF1P36956 1147 aa13.74□□□□□ -0.21
SMPD4-212ENST00000451542 MCM2P49736 904 aa13.74□□□□□ -0.21
SMPD4-212ENST00000451542 CLK2P49760 499 aaKnown RBP13.74□□□□□ -0.21
SMPD4-212ENST00000451542 PURAQ00577 322 aaKnown RBP13.74□□□□□ -0.21
SMPD4-212ENST00000451542 TLE2Q04725 743 aa13.74□□□□□ -0.21
SMPD4-212ENST00000451542 MTMR1Q13613 665 aa13.74□□□□□ -0.21
SMPD4-212ENST00000451542 ITGA7Q13683 1181 aa13.74□□□□□ -0.21
SMPD4-212ENST00000451542 TRIM29Q14134 588 aa13.74□□□□□ -0.21
SMPD4-212ENST00000451542 TMEM63BQ5T3F8 832 aa13.74□□□□□ -0.21
SMPD4-212ENST00000451542 METTL7BQ6UX53 244 aa13.74□□□□□ -0.21
SMPD4-212ENST00000451542 ANKRD33Q7Z3H0 272 aa13.74□□□□□ -0.21
SMPD4-212ENST00000451542 JADE2Q9NQC1 790 aa13.74□□□□□ -0.21
SMPD4-212ENST00000451542 PRDM5Q9NQX1 630 aaPredicted RBP13.74□□□□□ -0.21
SMPD4-212ENST00000451542 TCEAL9Q9UHQ7 104 aa13.74□□□□□ -0.21
SMPD4-212ENST00000451542 ZMYND8Q9ULU4 1186 aaPredicted RBP13.74□□□□□ -0.21
SMPD4-212ENST00000451542 PCDHA4Q9UN74 947 aa13.74□□□□□ -0.21
SMPD4-212ENST00000451542 ALPK3Q96L96 1907 aa13.73□□□□□ -0.21
SMPD4-212ENST00000451542 CLTBP09497 229 aa13.73□□□□□ -0.21
SMPD4-212ENST00000451542 SUPT20HL2P0C7V6 817 aa13.73□□□□□ -0.21
SMPD4-212ENST00000451542 UBA1P22314 1058 aaKnown RBP13.73□□□□□ -0.21
SMPD4-212ENST00000451542 IRX5P78411 483 aaPredicted RBP13.73□□□□□ -0.21
SMPD4-212ENST00000451542 ARHGAP4P98171 946 aa13.73□□□□□ -0.21
SMPD4-212ENST00000451542 CEP55Q53EZ4 464 aa13.73□□□□□ -0.21
SMPD4-212ENST00000451542 MYSM1Q5VVJ2 828 aa13.73□□□□□ -0.21
SMPD4-212ENST00000451542 NECAB1Q8N987 351 aa13.73□□□□□ -0.21
SMPD4-212ENST00000451542 ZFP91Q96JP5 570 aaPredicted RBP13.73□□□□□ -0.21
SMPD4-212ENST00000451542 MXRA8Q9BRK3 442 aa13.73□□□□□ -0.21
SMPD4-212ENST00000451542 SDF4Q9BRK5 362 aa13.73□□□□□ -0.21
SMPD4-212ENST00000451542 LLPHQ9BRT6 129 aaKnown RBP13.73□□□□□ -0.21
SMPD4-212ENST00000451542 TMEM260Q9NX78 707 aa13.73□□□□□ -0.21
SMPD4-212ENST00000451542 UBIAD1Q9Y5Z9 338 aa13.73□□□□□ -0.21
SMPD4-212ENST00000451542 CEP290O15078 2479 aa13.72□□□□□ -0.21
SMPD4-212ENST00000451542 SETQ01105 290 aaPredicted RBP13.72□□□□□ -0.21
SMPD4-212ENST00000451542 PTPN11Q06124 597 aaPredicted RBP13.72□□□□□ -0.21
SMPD4-212ENST00000451542 FAM47CQ5HY64 1035 aa13.72□□□□□ -0.21
SMPD4-212ENST00000451542 NIPA1Q7RTP0 329 aa13.72□□□□□ -0.21
SMPD4-212ENST00000451542 BLIDQ8IZY5 108 aa13.72□□□□□ -0.21
SMPD4-212ENST00000451542 DAGLBQ8NCG7 672 aa13.72□□□□□ -0.21
SMPD4-212ENST00000451542 ALG1Q9BT22 464 aa13.72□□□□□ -0.21
SMPD4-212ENST00000451542 TMEM39AQ9NV64 488 aa13.72□□□□□ -0.21
SMPD4-212ENST00000451542 KIF3AQ9Y496 699 aa13.72□□□□□ -0.21
SMPD4-212ENST00000451542 CCDC194A0A1B0GVG4 234 aa13.71□□□□□ -0.21
SMPD4-212ENST00000451542 CYP3A4P08684 503 aa13.71□□□□□ -0.21
SMPD4-212ENST00000451542 RAG1P15918 1043 aa13.71□□□□□ -0.21
SMPD4-212ENST00000451542 SYN1P17600 705 aa13.71□□□□□ -0.21
SMPD4-212ENST00000451542 ITGB5P18084 799 aa13.71□□□□□ -0.21
SMPD4-212ENST00000451542 CDK7P50613 346 aa13.71□□□□□ -0.21
SMPD4-212ENST00000451542 USP11P51784 963 aa13.71□□□□□ -0.21
SMPD4-212ENST00000451542 CHMP4BP1P59074 171 aa13.71□□□□□ -0.21
SMPD4-212ENST00000451542 HMGN5P82970 282 aaKnown RBP13.71□□□□□ -0.21
SMPD4-212ENST00000451542 NFRKBQ6P4R8 1299 aa13.71□□□□□ -0.21
SMPD4-212ENST00000451542 CYFIP1Q7L576 1253 aa13.71□□□□□ -0.21
SMPD4-212ENST00000451542 KRT25Q7Z3Z0 450 aa13.71□□□□□ -0.21
SMPD4-212ENST00000451542 FAM184AQ8NB25 1140 aa13.71□□□□□ -0.21
SMPD4-212ENST00000451542 TNPO1Q92973 898 aaKnown RBP13.71□□□□□ -0.21
SMPD4-212ENST00000451542 PGBD1Q96JS3 809 aa13.71□□□□□ -0.21
SMPD4-212ENST00000451542 TBC1D32Q96NH3 1257 aa13.71□□□□□ -0.21
SMPD4-212ENST00000451542 KIF2CQ99661 725 aa13.71□□□□□ -0.21
SMPD4-212ENST00000451542 BACH2Q9BYV9 841 aa13.71□□□□□ -0.21
SMPD4-212ENST00000451542 ZNF215Q9UL58 517 aaPredicted RBP13.71□□□□□ -0.21
SMPD4-212ENST00000451542 NOD1Q9Y239 953 aa13.71□□□□□ -0.21
SMPD4-212ENST00000451542 MEIS1O00470 390 aa13.7□□□□□ -0.22
SMPD4-212ENST00000451542 PTGS1P23219 599 aa13.7□□□□□ -0.22
SMPD4-212ENST00000451542 PSMC6P62333 389 aa13.7□□□□□ -0.22
SMPD4-212ENST00000451542 SP2Q02086 613 aa13.7□□□□□ -0.22
SMPD4-212ENST00000451542 SAFBQ15424 915 aaKnown RBP eCLIP13.7□□□□□ -0.22
SMPD4-212ENST00000451542 HSDL1Q3SXM5 330 aa13.7□□□□□ -0.22
SMPD4-212ENST00000451542 PLA2G4DQ86XP0 818 aa13.7□□□□□ -0.22
SMPD4-212ENST00000451542 CCDC83Q8IWF9 413 aa13.7□□□□□ -0.22
SMPD4-212ENST00000451542 C7orf31Q8N865 590 aa13.7□□□□□ -0.22
SMPD4-212ENST00000451542 SLC43A3Q8NBI5 491 aa13.7□□□□□ -0.22
SMPD4-212ENST00000451542 NSUN7Q8NE18 718 aaKnown RBP13.7□□□□□ -0.22
SMPD4-212ENST00000451542 NAP1L4Q99733 375 aaKnown RBP13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms