RNA–Protein interactions for RNA: ENST00000450303.6

PRPF40A-204, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 3

Gene PRPF40A, Length 496 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-204ENST00000450303 BRPF3Q9ULD4 1205 aa19.59■□□□□ 0.73
PRPF40A-204ENST00000450303 NAP1L2Q9ULW6 460 aaPredicted RBP19.59■□□□□ 0.73
PRPF40A-204ENST00000450303 LIMCH1Q9UPQ0 1083 aa19.59■□□□□ 0.73
PRPF40A-204ENST00000450303 APOBRQ0VD83 1088 aa19.58■□□□□ 0.72
PRPF40A-204ENST00000450303 BECN1Q14457 450 aa19.58■□□□□ 0.72
PRPF40A-204ENST00000450303 TMTC3Q6ZXV5 915 aa19.58■□□□□ 0.72
PRPF40A-204ENST00000450303 SMARCC2Q8TAQ2 1214 aa19.58■□□□□ 0.72
PRPF40A-204ENST00000450303 ZNF274Q96GC6 653 aaPredicted RBP19.58■□□□□ 0.72
PRPF40A-204ENST00000450303 SCLYQ96I15 445 aa19.58■□□□□ 0.72
PRPF40A-204ENST00000450303 WNT8AQ9H1J5 351 aa19.58■□□□□ 0.72
PRPF40A-204ENST00000450303 RTEL1Q9NZ71 1219 aa19.58■□□□□ 0.72
PRPF40A-204ENST00000450303 KLF18A0A0U1RQI7 1052 aa19.57■□□□□ 0.72
PRPF40A-204ENST00000450303 SUPT20HL2P0C7V6 817 aa19.57■□□□□ 0.72
PRPF40A-204ENST00000450303 SP2Q02086 613 aa19.57■□□□□ 0.72
PRPF40A-204ENST00000450303 LAMC2Q13753 1193 aa19.57■□□□□ 0.72
PRPF40A-204ENST00000450303 NFRKBQ6P4R8 1299 aa19.57■□□□□ 0.72
PRPF40A-204ENST00000450303 APOA5Q6Q788 366 aa19.57■□□□□ 0.72
PRPF40A-204ENST00000450303 KAT2BQ92831 832 aa19.57■□□□□ 0.72
PRPF40A-204ENST00000450303 CUL5Q93034 780 aa19.57■□□□□ 0.72
PRPF40A-204ENST00000450303 BCAS3Q9H6U6 928 aa19.57■□□□□ 0.72
PRPF40A-204ENST00000450303 IL23AQ9NPF7 189 aa19.57■□□□□ 0.72
PRPF40A-204ENST00000450303 DOCK5Q9H7D0 1870 aa19.56■□□□□ 0.72
PRPF40A-204ENST00000450303 MEIS2O14770 477 aa19.56■□□□□ 0.72
PRPF40A-204ENST00000450303 ZBTB43O43298 467 aa19.56■□□□□ 0.72
PRPF40A-204ENST00000450303 GGPS1O95749 300 aa19.56■□□□□ 0.72
PRPF40A-204ENST00000450303 RCAN1P53805 252 aa19.56■□□□□ 0.72
PRPF40A-204ENST00000450303 EVCP57679 992 aa19.56■□□□□ 0.72
PRPF40A-204ENST00000450303 MRPS9P82933 396 aaKnown RBP19.56■□□□□ 0.72
PRPF40A-204ENST00000450303 SMAD3P84022 425 aaKnown RBP19.56■□□□□ 0.72
PRPF40A-204ENST00000450303 DGKDQ16760 1214 aa19.56■□□□□ 0.72
PRPF40A-204ENST00000450303 ZNF697Q5TEC3 545 aa19.56■□□□□ 0.72
PRPF40A-204ENST00000450303 FAM109BQ6ICB4 259 aaPredicted RBP19.56■□□□□ 0.72
PRPF40A-204ENST00000450303 ALG1Q9BT22 464 aa19.56■□□□□ 0.72
PRPF40A-204ENST00000450303 SH2B1Q9NRF2 756 aaPredicted RBP19.56■□□□□ 0.72
PRPF40A-204ENST00000450303 SCN5AQ14524 2016 aa19.56■□□□□ 0.72
PRPF40A-204ENST00000450303 GRXCR1A8MXD5 290 aa19.55■□□□□ 0.72
PRPF40A-204ENST00000450303 ZNF286BP0CG31 522 aa19.55■□□□□ 0.72
PRPF40A-204ENST00000450303 CELF3Q5SZQ8 465 aaKnown RBP19.55■□□□□ 0.72
PRPF40A-204ENST00000450303 MYSM1Q5VVJ2 828 aa19.55■□□□□ 0.72
PRPF40A-204ENST00000450303 KCNV1Q6PIU1 500 aa19.55■□□□□ 0.72
PRPF40A-204ENST00000450303 EMID1Q96A84 441 aaPredicted RBP19.55■□□□□ 0.72
PRPF40A-204ENST00000450303 SLKQ9H2G2 1235 aaPredicted RBP19.55■□□□□ 0.72
PRPF40A-204ENST00000450303 TRIP12Q14669 1992 aaPredicted RBP19.55■□□□□ 0.72
PRPF40A-204ENST00000450303 HSFX4A0A1B0GTS1 333 aaPredicted RBP19.54■□□□□ 0.72
PRPF40A-204ENST00000450303 HSFX3A0A1B0GWH4 333 aaPredicted RBP19.54■□□□□ 0.72
PRPF40A-204ENST00000450303 GOLGA8BA8MQT2 603 aa19.54■□□□□ 0.72
PRPF40A-204ENST00000450303 FGBP02675 491 aa19.54■□□□□ 0.72
PRPF40A-204ENST00000450303 UBA1P22314 1058 aaKnown RBP19.54■□□□□ 0.72
PRPF40A-204ENST00000450303 PSEN2P49810 448 aa19.54■□□□□ 0.72
PRPF40A-204ENST00000450303 PTPN11Q06124 597 aaPredicted RBP19.54■□□□□ 0.72
PRPF40A-204ENST00000450303 UBE2SQ16763 222 aa19.54■□□□□ 0.72
PRPF40A-204ENST00000450303 RTN1Q16799 776 aa19.54■□□□□ 0.72
PRPF40A-204ENST00000450303 HSDL1Q3SXM5 330 aa19.54■□□□□ 0.72
PRPF40A-204ENST00000450303 PSRC1Q6PGN9 363 aaPredicted RBP19.54■□□□□ 0.72
PRPF40A-204ENST00000450303 HEATR3Q7Z4Q2 680 aa19.54■□□□□ 0.72
PRPF40A-204ENST00000450303 PPTC7Q8NI37 304 aa19.54■□□□□ 0.72
PRPF40A-204ENST00000450303 SPATA33Q96N06 139 aa19.54■□□□□ 0.72
PRPF40A-204ENST00000450303 GUCD1Q96NT3 240 aa19.54■□□□□ 0.72
PRPF40A-204ENST00000450303 LARP6Q9BRS8 491 aaKnown RBP19.54■□□□□ 0.72
PRPF40A-204ENST00000450303 SEMA6BQ9H3T3 888 aa19.54■□□□□ 0.72
PRPF40A-204ENST00000450303 PSTPIP2Q9H939 334 aa19.54■□□□□ 0.72
PRPF40A-204ENST00000450303 MLXIPQ9HAP2 919 aa19.54■□□□□ 0.72
PRPF40A-204ENST00000450303 TPCN1Q9ULQ1 816 aa19.54■□□□□ 0.72
PRPF40A-204ENST00000450303 NOD1Q9Y239 953 aa19.54■□□□□ 0.72
PRPF40A-204ENST00000450303 LAMA2P24043 3122 aaKnown RBP19.54■□□□□ 0.72
PRPF40A-204ENST00000450303 FRMPD4Q14CM0 1322 aa19.53■□□□□ 0.72
PRPF40A-204ENST00000450303 CCDC196A0A1B0GTZ2 297 aa19.53■□□□□ 0.72
PRPF40A-204ENST00000450303 GOLGA8AA7E2F4 631 aa19.53■□□□□ 0.72
PRPF40A-204ENST00000450303 PDIA3P30101 505 aaKnown RBP19.53■□□□□ 0.72
PRPF40A-204ENST00000450303 METAP2P50579 478 aaKnown RBP eCLIP19.53■□□□□ 0.72
PRPF40A-204ENST00000450303 PTGISQ16647 500 aa19.53■□□□□ 0.72
PRPF40A-204ENST00000450303 GDF6Q6KF10 455 aaPredicted RBP19.53■□□□□ 0.72
PRPF40A-204ENST00000450303 OTOP2Q7RTS6 562 aa19.53■□□□□ 0.72
PRPF40A-204ENST00000450303 DEFB128Q7Z7B8 93 aa19.53■□□□□ 0.72
PRPF40A-204ENST00000450303 TTYH1Q9H313 450 aaPredicted RBP19.53■□□□□ 0.72
PRPF40A-204ENST00000450303 RBM28Q9NW13 759 aaKnown RBP19.53■□□□□ 0.72
PRPF40A-204ENST00000450303 CXXC1Q9P0U4 656 aaPredicted RBP19.53■□□□□ 0.72
PRPF40A-204ENST00000450303 HDAC6Q9UBN7 1215 aa19.53■□□□□ 0.72
PRPF40A-204ENST00000450303 CNTNAP5Q8WYK1 1306 aa19.52■□□□□ 0.72
PRPF40A-204ENST00000450303 K7ELQ4 463 aaPredicted RBP19.52■□□□□ 0.72
PRPF40A-204ENST00000450303 PIK3CDO00329 1044 aa19.52■□□□□ 0.72
PRPF40A-204ENST00000450303 TGFB3P10600 412 aa19.52■□□□□ 0.72
PRPF40A-204ENST00000450303 SEMA3FQ13275 785 aa19.52■□□□□ 0.72
PRPF40A-204ENST00000450303 MFSD10Q14728 455 aa19.52■□□□□ 0.72
PRPF40A-204ENST00000450303 RASIP1Q5U651 963 aa19.52■□□□□ 0.72
PRPF40A-204ENST00000450303 CPLX2Q6PUV4 134 aaKnown RBP19.52■□□□□ 0.72
PRPF40A-204ENST00000450303 VWCEQ96DN2 955 aa19.52■□□□□ 0.72
PRPF40A-204ENST00000450303 STXBP5LQ9Y2K9 1186 aa19.52■□□□□ 0.72
PRPF40A-204ENST00000450303 V9GY48 417 aaPredicted RBP19.52■□□□□ 0.72
PRPF40A-204ENST00000450303 SPATA31C2B4DYI2 1134 aa19.51■□□□□ 0.71
PRPF40A-204ENST00000450303 PFKFB2O60825 505 aa19.51■□□□□ 0.71
PRPF40A-204ENST00000450303 CD2BP2O95400 341 aaKnown RBP19.51■□□□□ 0.71
PRPF40A-204ENST00000450303 CDC27P30260 824 aa19.51■□□□□ 0.71
PRPF40A-204ENST00000450303 STK3Q13188 491 aa19.51■□□□□ 0.71
PRPF40A-204ENST00000450303 ME3Q16798 604 aa19.51■□□□□ 0.71
PRPF40A-204ENST00000450303 KIAA0753Q2KHM9 967 aa19.51■□□□□ 0.71
PRPF40A-204ENST00000450303 GNPTABQ3T906 1256 aa19.51■□□□□ 0.71
PRPF40A-204ENST00000450303 PCNX4Q63HM2 1172 aa19.51■□□□□ 0.71
PRPF40A-204ENST00000450303 WWC2Q6AWC2 1192 aa19.51■□□□□ 0.71
PRPF40A-204ENST00000450303 RPUSD2Q8IZ73 545 aaKnown RBP19.51■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms