RNA–Protein interactions for RNA: ENST00000450297.1

SPTLC3-204, Transcript of serine palmitoyltransferase long chain base subunit 3, humanhuman

TSL 3

Gene SPTLC3, Length 645 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC3-204ENST00000450297 ZSCAN10Q96SZ4 725 aaPredicted RBP11.26□□□□□ -0.61
SPTLC3-204ENST00000450297 LNPKQ9C0E8 428 aa11.26□□□□□ -0.61
SPTLC3-204ENST00000450297 DIAPH3Q9NSV4 1193 aa11.26□□□□□ -0.61
SPTLC3-204ENST00000450297 COL20A1Q9P218 1284 aa11.26□□□□□ -0.61
SPTLC3-204ENST00000450297 GTF2IRD1Q9UHL9 959 aa11.26□□□□□ -0.61
SPTLC3-204ENST00000450297 DDX41Q9UJV9 622 aaKnown RBP11.26□□□□□ -0.61
SPTLC3-204ENST00000450297 SALL3Q9BXA9 1300 aa11.26□□□□□ -0.61
SPTLC3-204ENST00000450297 B4E1Z4 1266 aa11.25□□□□□ -0.61
SPTLC3-204ENST00000450297 EFCAB14O75071 495 aa11.25□□□□□ -0.61
SPTLC3-204ENST00000450297 AMHP03971 560 aa11.25□□□□□ -0.61
SPTLC3-204ENST00000450297 NR3C2P08235 984 aa11.25□□□□□ -0.61
SPTLC3-204ENST00000450297 SDSP20132 328 aa11.25□□□□□ -0.61
SPTLC3-204ENST00000450297 SSTR3P32745 418 aaPredicted RBP11.25□□□□□ -0.61
SPTLC3-204ENST00000450297 PTK7Q13308 1070 aa11.25□□□□□ -0.61
SPTLC3-204ENST00000450297 ZNF618Q5T7W0 954 aa11.25□□□□□ -0.61
SPTLC3-204ENST00000450297 B4GALNT3Q6L9W6 998 aa11.25□□□□□ -0.61
SPTLC3-204ENST00000450297 CWC27Q6UX04 472 aaKnown RBP11.25□□□□□ -0.61
SPTLC3-204ENST00000450297 EP400NLQ6ZTU2 488 aa11.25□□□□□ -0.61
SPTLC3-204ENST00000450297 SPATA33Q96N06 139 aa11.25□□□□□ -0.61
SPTLC3-204ENST00000450297 CTAGE1Q96RT6 745 aa11.25□□□□□ -0.61
SPTLC3-204ENST00000450297 UBAC1Q9BSL1 405 aa11.25□□□□□ -0.61
SPTLC3-204ENST00000450297 LRFN3Q9BTN0 628 aa11.25□□□□□ -0.61
SPTLC3-204ENST00000450297 ZMYM6O95789 1325 aa11.25□□□□□ -0.61
SPTLC3-204ENST00000450297 MYO9BQ13459 2157 aa11.24□□□□□ -0.61
SPTLC3-204ENST00000450297 FAM86C2PA6NEL3 165 aa11.24□□□□□ -0.61
SPTLC3-204ENST00000450297 LPXNO60711 386 aa11.24□□□□□ -0.61
SPTLC3-204ENST00000450297 GJB5O95377 273 aa11.24□□□□□ -0.61
SPTLC3-204ENST00000450297 KCNA5P22460 613 aa11.24□□□□□ -0.61
SPTLC3-204ENST00000450297 THPOP40225 353 aa11.24□□□□□ -0.61
SPTLC3-204ENST00000450297 ZNF200P98182 395 aaPredicted RBP11.24□□□□□ -0.61
SPTLC3-204ENST00000450297 GPNMBQ14956 572 aa11.24□□□□□ -0.61
SPTLC3-204ENST00000450297 MYOCDQ8IZQ8 938 aa11.24□□□□□ -0.61
SPTLC3-204ENST00000450297 FBXO22Q8NEZ5 403 aa11.24□□□□□ -0.61
SPTLC3-204ENST00000450297 PPTC7Q8NI37 304 aa11.24□□□□□ -0.61
SPTLC3-204ENST00000450297 AMNQ9BXJ7 453 aa11.24□□□□□ -0.61
SPTLC3-204ENST00000450297 MAF1Q9H063 256 aa11.24□□□□□ -0.61
SPTLC3-204ENST00000450297 SUGCTQ9HAC7 445 aa11.24□□□□□ -0.61
SPTLC3-204ENST00000450297 MLXIPQ9HAP2 919 aa11.24□□□□□ -0.61
SPTLC3-204ENST00000450297 PXMP2Q9NR77 195 aa11.24□□□□□ -0.61
SPTLC3-204ENST00000450297 LMCD1Q9NZU5 365 aa11.24□□□□□ -0.61
SPTLC3-204ENST00000450297 BDP1A6H8Y1 2624 aa11.23□□□□□ -0.61
SPTLC3-204ENST00000450297 LINC01553A4QN01 128 aa11.23□□□□□ -0.61
SPTLC3-204ENST00000450297 RSPH10B2B2RC85 870 aa11.23□□□□□ -0.61
SPTLC3-204ENST00000450297 LGR5O75473 907 aa11.23□□□□□ -0.61
SPTLC3-204ENST00000450297 GGPS1O95749 300 aa11.23□□□□□ -0.61
SPTLC3-204ENST00000450297 F2P00734 622 aa11.23□□□□□ -0.61
SPTLC3-204ENST00000450297 CXCL10P02778 98 aa11.23□□□□□ -0.61
SPTLC3-204ENST00000450297 RSPH10BP0C881 870 aa11.23□□□□□ -0.61
SPTLC3-204ENST00000450297 HOXA13P31271 388 aaPredicted RBP11.23□□□□□ -0.61
SPTLC3-204ENST00000450297 RRP1P56182 461 aaKnown RBP11.23□□□□□ -0.61
SPTLC3-204ENST00000450297 ERVK-21P61565 698 aa11.23□□□□□ -0.61
SPTLC3-204ENST00000450297 HDAC1Q13547 482 aaPredicted RBP11.23□□□□□ -0.61
SPTLC3-204ENST00000450297 IMMTQ16891 758 aaKnown RBP11.23□□□□□ -0.61
SPTLC3-204ENST00000450297 TCTN1Q2MV58 587 aa11.23□□□□□ -0.61
SPTLC3-204ENST00000450297 KCNV1Q6PIU1 500 aa11.23□□□□□ -0.61
SPTLC3-204ENST00000450297 LIN28BQ6ZN17 250 aaKnown RBP eCLIP11.23□□□□□ -0.61
SPTLC3-204ENST00000450297 TICAM2Q86XR7 235 aa11.23□□□□□ -0.61
SPTLC3-204ENST00000450297 ENAHQ8N8S7 591 aaPredicted RBP11.23□□□□□ -0.61
SPTLC3-204ENST00000450297 ZFP91Q96JP5 570 aaPredicted RBP11.23□□□□□ -0.61
SPTLC3-204ENST00000450297 UIMC1Q96RL1 719 aa11.23□□□□□ -0.61
SPTLC3-204ENST00000450297 UBE2ZQ9H832 354 aaPredicted RBP11.23□□□□□ -0.61
SPTLC3-204ENST00000450297 JMJD4Q9H9V9 463 aa11.23□□□□□ -0.61
SPTLC3-204ENST00000450297 ZSWIM5Q9P217 1185 aa11.23□□□□□ -0.61
SPTLC3-204ENST00000450297 CTNNA3Q9UI47 895 aa11.23□□□□□ -0.61
SPTLC3-204ENST00000450297 INSL6Q9Y581 213 aa11.23□□□□□ -0.61
SPTLC3-204ENST00000450297 GBF1Q92538 1859 aa11.23□□□□□ -0.61
SPTLC3-204ENST00000450297 C17orf102A2RUQ5 167 aa11.22□□□□□ -0.61
SPTLC3-204ENST00000450297 RBAK-RBAKDNI3L0D1 243 aa11.22□□□□□ -0.61
SPTLC3-204ENST00000450297 PPFIA4O75335 1185 aa11.22□□□□□ -0.61
SPTLC3-204ENST00000450297 NT5C2P49902 561 aa11.22□□□□□ -0.61
SPTLC3-204ENST00000450297 RBL2Q08999 1139 aa11.22□□□□□ -0.61
SPTLC3-204ENST00000450297 PTPROQ16827 1216 aa11.22□□□□□ -0.61
SPTLC3-204ENST00000450297 CELF3Q5SZQ8 465 aaKnown RBP11.22□□□□□ -0.61
SPTLC3-204ENST00000450297 IFIT1BQ5T764 474 aaKnown RBP11.22□□□□□ -0.61
SPTLC3-204ENST00000450297 EMSYQ7Z589 1322 aa11.22□□□□□ -0.61
SPTLC3-204ENST00000450297 FCHSD1Q86WN1 690 aa11.22□□□□□ -0.61
SPTLC3-204ENST00000450297 HOMER1Q86YM7 354 aa11.22□□□□□ -0.61
SPTLC3-204ENST00000450297 PDCD7Q8N8D1 485 aaKnown RBP11.22□□□□□ -0.61
SPTLC3-204ENST00000450297 ATP6V0A1Q93050 837 aa11.22□□□□□ -0.61
SPTLC3-204ENST00000450297 WNT8BQ93098 351 aa11.22□□□□□ -0.61
SPTLC3-204ENST00000450297 EMID1Q96A84 441 aaPredicted RBP11.22□□□□□ -0.61
SPTLC3-204ENST00000450297 YME1L1Q96TA2 773 aa11.22□□□□□ -0.61
SPTLC3-204ENST00000450297 C17orf80Q9BSJ5 609 aa11.22□□□□□ -0.61
SPTLC3-204ENST00000450297 KRT23Q9C075 422 aa11.22□□□□□ -0.61
SPTLC3-204ENST00000450297 PCDHA1Q9Y5I3 950 aa11.22□□□□□ -0.61
SPTLC3-204ENST00000450297 TCF20Q9UGU0 1960 aaKnown RBP11.21□□□□□ -0.61
SPTLC3-204ENST00000450297 KLRF2D3W0D1 207 aa11.21□□□□□ -0.61
SPTLC3-204ENST00000450297 GCOM1H8Y6P7 765 aaPredicted RBP11.21□□□□□ -0.61
SPTLC3-204ENST00000450297 HAS3O00219 553 aa11.21□□□□□ -0.61
SPTLC3-204ENST00000450297 NOP56O00567 594 aaKnown RBP11.21□□□□□ -0.61
SPTLC3-204ENST00000450297 UPP2O95045 317 aa11.21□□□□□ -0.61
SPTLC3-204ENST00000450297 CTSHP09668 335 aa11.21□□□□□ -0.61
SPTLC3-204ENST00000450297 POLR2MP0CAP2 368 aa11.21□□□□□ -0.61
SPTLC3-204ENST00000450297 CCND2P30279 289 aa11.21□□□□□ -0.61
SPTLC3-204ENST00000450297 MBTPS1Q14703 1052 aa11.21□□□□□ -0.61
SPTLC3-204ENST00000450297 TRIM71Q2Q1W2 868 aaKnown RBP11.21□□□□□ -0.61
SPTLC3-204ENST00000450297 HSDL1Q3SXM5 330 aa11.21□□□□□ -0.61
SPTLC3-204ENST00000450297 MYSM1Q5VVJ2 828 aa11.21□□□□□ -0.61
SPTLC3-204ENST00000450297 PTCRAQ6ISU1 281 aaPredicted RBP11.21□□□□□ -0.61
SPTLC3-204ENST00000450297 GJD3Q8N144 294 aa11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms