RNA–Protein interactions for RNA: ENST00000449082.2

SCN10A-201, Transcript of sodium voltage-gated channel alpha subunit 10, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN10A, Length 6,418 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN10A-201ENST00000449082 PSMD2Q13200 908 aa11.1□□□□□ -0.63
SCN10A-201ENST00000449082 RFX6Q8HWS3 928 aa11.1□□□□□ -0.63
SCN10A-201ENST00000449082 CYP2D7A0A087X1C5 515 aa11.1□□□□□ -0.63
SCN10A-201ENST00000449082 SRGAP2BP0DMP2 458 aa11.1□□□□□ -0.63
SCN10A-201ENST00000449082 FKBP3Q00688 224 aaKnown RBP11.1□□□□□ -0.63
SCN10A-201ENST00000449082 MAN2A1Q16706 1144 aa11.1□□□□□ -0.63
SCN10A-201ENST00000449082 UBE2SQ16763 222 aa11.1□□□□□ -0.63
SCN10A-201ENST00000449082 CCDC13Q8IYE1 715 aa11.1□□□□□ -0.63
SCN10A-201ENST00000449082 C17orf53Q8N3J3 647 aaPredicted RBP11.1□□□□□ -0.63
SCN10A-201ENST00000449082 ANAPC5Q9UJX4 755 aa11.1□□□□□ -0.63
SCN10A-201ENST00000449082 TET3O43151 1660 aa11.1□□□□□ -0.63
SCN10A-201ENST00000449082 PRDM15P57071 1507 aaPredicted RBP11.1□□□□□ -0.63
SCN10A-201ENST00000449082 PLEKHG2Q9H7P9 1386 aa11.1□□□□□ -0.63
SCN10A-201ENST00000449082 RNF40O75150 1001 aa11.1□□□□□ -0.63
SCN10A-201ENST00000449082 VPS41P49754 854 aa11.1□□□□□ -0.63
SCN10A-201ENST00000449082 DGKHQ86XP1 1220 aa11.1□□□□□ -0.63
SCN10A-201ENST00000449082 CDKL2Q92772 493 aa11.1□□□□□ -0.63
SCN10A-201ENST00000449082 PLEKHA4Q9H4M7 779 aa11.1□□□□□ -0.63
SCN10A-201ENST00000449082 SH3GLB2Q9NR46 395 aa11.1□□□□□ -0.63
SCN10A-201ENST00000449082 CYP27B1O15528 508 aa11.1□□□□□ -0.63
SCN10A-201ENST00000449082 GUCY2FP51841 1108 aa11.1□□□□□ -0.63
SCN10A-201ENST00000449082 TTC31Q49AM3 519 aaPredicted RBP11.1□□□□□ -0.63
SCN10A-201ENST00000449082 FAM149B1Q96BN6 582 aa11.1□□□□□ -0.63
SCN10A-201ENST00000449082 SCYL1Q96KG9 808 aa11.1□□□□□ -0.63
SCN10A-201ENST00000449082 PCIF1Q9H4Z3 704 aa11.1□□□□□ -0.63
SCN10A-201ENST00000449082 PASKQ96RG2 1323 aa11.09□□□□□ -0.63
SCN10A-201ENST00000449082 PODNQ7Z5L7 613 aa11.09□□□□□ -0.63
SCN10A-201ENST00000449082 ANKRD42Q8N9B4 389 aa11.09□□□□□ -0.63
SCN10A-201ENST00000449082 VCX3BQ9H321 246 aa11.09□□□□□ -0.63
SCN10A-201ENST00000449082 HOXC10Q9NYD6 342 aa11.09□□□□□ -0.63
SCN10A-201ENST00000449082 FBXO40Q9UH90 709 aa11.09□□□□□ -0.63
SCN10A-201ENST00000449082 GH2P01242 217 aa11.09□□□□□ -0.63
SCN10A-201ENST00000449082 EIF2AK2P19525 551 aaKnown RBP11.09□□□□□ -0.63
SCN10A-201ENST00000449082 LRRC41Q15345 812 aa11.09□□□□□ -0.63
SCN10A-201ENST00000449082 SH3RF3Q8TEJ3 882 aaPredicted RBP11.09□□□□□ -0.63
SCN10A-201ENST00000449082 BCAP29Q9UHQ4 241 aa11.09□□□□□ -0.63
SCN10A-201ENST00000449082 ESYT2A0FGR8 921 aa11.09□□□□□ -0.63
SCN10A-201ENST00000449082 CLIC2O15247 247 aa11.09□□□□□ -0.63
SCN10A-201ENST00000449082 ECE2O60344 883 aa11.09□□□□□ -0.63
SCN10A-201ENST00000449082 PPFIA4O75335 1185 aa11.09□□□□□ -0.63
SCN10A-201ENST00000449082 SASH1O94885 1247 aa11.09□□□□□ -0.63
SCN10A-201ENST00000449082 SLFN14P0C7P3 912 aa11.09□□□□□ -0.63
SCN10A-201ENST00000449082 PLA2G4BP0C869 781 aa11.09□□□□□ -0.63
SCN10A-201ENST00000449082 CACNB1Q02641 598 aaPredicted RBP11.09□□□□□ -0.63
SCN10A-201ENST00000449082 AP3B2Q13367 1082 aa11.09□□□□□ -0.63
SCN10A-201ENST00000449082 MESDQ14696 234 aa11.09□□□□□ -0.63
SCN10A-201ENST00000449082 BRD3Q15059 726 aa11.09□□□□□ -0.63
SCN10A-201ENST00000449082 TTBK2Q6IQ55 1244 aa11.09□□□□□ -0.63
SCN10A-201ENST00000449082 ELMSAN1Q6PJG2 1045 aa11.09□□□□□ -0.63
SCN10A-201ENST00000449082 ZBTB33Q86T24 672 aa11.09□□□□□ -0.63
SCN10A-201ENST00000449082 CABS1Q96KC9 395 aa11.09□□□□□ -0.63
SCN10A-201ENST00000449082 SLC38A10Q9HBR0 1119 aa11.09□□□□□ -0.63
SCN10A-201ENST00000449082 PTCH1Q13635 1447 aa11.09□□□□□ -0.63
SCN10A-201ENST00000449082 ADCY10Q96PN6 1610 aa11.09□□□□□ -0.63
SCN10A-201ENST00000449082 PTPROQ16827 1216 aa11.09□□□□□ -0.63
SCN10A-201ENST00000449082 TCP11Q8WWU5 503 aa11.09□□□□□ -0.63
SCN10A-201ENST00000449082 VCXQ9H320 206 aa11.09□□□□□ -0.63
SCN10A-201ENST00000449082 HOMER3Q9NSC5 361 aa11.09□□□□□ -0.63
SCN10A-201ENST00000449082 PSMD6Q15008 389 aa11.09□□□□□ -0.63
SCN10A-201ENST00000449082 TBC1D10BQ4KMP7 808 aaPredicted RBP11.09□□□□□ -0.63
SCN10A-201ENST00000449082 C10orf67Q8IYJ2 551 aa11.09□□□□□ -0.63
SCN10A-201ENST00000449082 GIMAP8Q8ND71 665 aaPredicted RBP11.09□□□□□ -0.63
SCN10A-201ENST00000449082 RAB3IPQ96QF0 476 aaPredicted RBP11.09□□□□□ -0.63
SCN10A-201ENST00000449082 RPF1Q9H9Y2 349 aaKnown RBP11.09□□□□□ -0.63
SCN10A-201ENST00000449082 MAPK4P31152 587 aa11.08□□□□□ -0.64
SCN10A-201ENST00000449082 MGARPQ8TDB4 240 aa11.08□□□□□ -0.64
SCN10A-201ENST00000449082 EMILIN3Q9NT22 766 aa11.08□□□□□ -0.64
SCN10A-201ENST00000449082 CPSF3Q9UKF6 684 aaKnown RBP11.08□□□□□ -0.64
SCN10A-201ENST00000449082 MINPP1Q9UNW1 487 aa11.08□□□□□ -0.64
SCN10A-201ENST00000449082 ANXA13P27216 316 aa11.08□□□□□ -0.64
SCN10A-201ENST00000449082 MCAMP43121 646 aa11.08□□□□□ -0.64
SCN10A-201ENST00000449082 JAK3P52333 1124 aa11.08□□□□□ -0.64
SCN10A-201ENST00000449082 RASSF7Q02833 373 aa11.08□□□□□ -0.64
SCN10A-201ENST00000449082 NR5A1Q13285 461 aa11.08□□□□□ -0.64
SCN10A-201ENST00000449082 ZNF653Q96CK0 615 aa11.08□□□□□ -0.64
SCN10A-201ENST00000449082 RSRC1Q96IZ7 334 aaKnown RBP11.08□□□□□ -0.64
SCN10A-201ENST00000449082 TRIM56Q9BRZ2 755 aaKnown RBP11.08□□□□□ -0.64
SCN10A-201ENST00000449082 NUF2Q9BZD4 464 aa11.08□□□□□ -0.64
SCN10A-201ENST00000449082 DPH5Q9H2P9 285 aa11.08□□□□□ -0.64
SCN10A-201ENST00000449082 LRRC4Q9HBW1 653 aa11.08□□□□□ -0.64
SCN10A-201ENST00000449082 FEM1BQ9UK73 627 aa11.08□□□□□ -0.64
SCN10A-201ENST00000449082 CPSF1Q10570 1443 aaKnown RBP11.08□□□□□ -0.64
SCN10A-201ENST00000449082 HOXA13P31271 388 aaPredicted RBP11.08□□□□□ -0.64
SCN10A-201ENST00000449082 MYRIPQ8NFW9 859 aa11.08□□□□□ -0.64
SCN10A-201ENST00000449082 MAD1L1Q9Y6D9 718 aa11.08□□□□□ -0.64
SCN10A-201ENST00000449082 HGSO14964 777 aaPredicted RBP11.08□□□□□ -0.64
SCN10A-201ENST00000449082 GNAT1P11488 350 aa11.08□□□□□ -0.64
SCN10A-201ENST00000449082 SLFN12LQ6IEE8 588 aa11.08□□□□□ -0.64
SCN10A-201ENST00000449082 ADAT2Q7Z6V5 191 aaKnown RBP11.08□□□□□ -0.64
SCN10A-201ENST00000449082 APOBEC3FQ8IUX4 373 aaKnown RBP11.08□□□□□ -0.64
SCN10A-201ENST00000449082 STRBPQ96SI9 672 aaKnown RBP11.08□□□□□ -0.64
SCN10A-201ENST00000449082 SRPRBQ9Y5M8 271 aaKnown RBP11.08□□□□□ -0.64
SCN10A-201ENST00000449082 GSTA1P08263 222 aa11.08□□□□□ -0.64
SCN10A-201ENST00000449082 MYL3P08590 195 aa11.08□□□□□ -0.64
SCN10A-201ENST00000449082 GSTA2P09210 222 aa11.08□□□□□ -0.64
SCN10A-201ENST00000449082 ARPP19P56211 112 aa11.08□□□□□ -0.64
SCN10A-201ENST00000449082 LRRC8AQ8IWT6 810 aa11.08□□□□□ -0.64
SCN10A-201ENST00000449082 STAG1Q8WVM7 1258 aa11.08□□□□□ -0.64
SCN10A-201ENST00000449082 MRPL47Q9HD33 250 aaKnown RBP11.08□□□□□ -0.64
SCN10A-201ENST00000449082 TNS3Q68CZ2 1445 aa11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms