RNA–Protein interactions for RNA: ENST00000448340.5

HLCS-205, Transcript of holocarboxylase synthetase, humanhuman

TSL 1 (best)

Gene HLCS, Length 780 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLCS-205ENST00000448340 CCDC144BQ3MJ40 725 aa20.13■□□□□ 0.81
HLCS-205ENST00000448340 LARP1BQ659C4 914 aaKnown RBP20.13■□□□□ 0.81
HLCS-205ENST00000448340 IQSEC1Q6DN90 963 aa20.13■□□□□ 0.81
HLCS-205ENST00000448340 SCFD2Q8WU76 684 aa20.13■□□□□ 0.81
HLCS-205ENST00000448340 FOXD4L1Q9NU39 408 aa20.13■□□□□ 0.81
HLCS-205ENST00000448340 DDX20Q9UHI6 824 aaKnown RBP20.13■□□□□ 0.81
HLCS-205ENST00000448340 MYH7BA7E2Y1 1941 aa20.12■□□□□ 0.81
HLCS-205ENST00000448340 CCDC194A0A1B0GVG4 234 aa20.12■□□□□ 0.81
HLCS-205ENST00000448340 BTBD18B2RXH4 712 aa20.12■□□□□ 0.81
HLCS-205ENST00000448340 NR5A1Q13285 461 aa20.12■□□□□ 0.81
HLCS-205ENST00000448340 NONOQ15233 471 aaKnown RBP eCLIP20.12■□□□□ 0.81
HLCS-205ENST00000448340 GNPTABQ3T906 1256 aa20.12■□□□□ 0.81
HLCS-205ENST00000448340 SEPT14Q6ZU15 432 aa20.12■□□□□ 0.81
HLCS-205ENST00000448340 TNFRSF25Q93038 417 aa20.12■□□□□ 0.81
HLCS-205ENST00000448340 INPP4AQ96PE3 977 aaPredicted RBP20.12■□□□□ 0.81
HLCS-205ENST00000448340 SENP6Q9GZR1 1112 aaPredicted RBP20.12■□□□□ 0.81
HLCS-205ENST00000448340 PDGFCQ9NRA1 345 aa20.12■□□□□ 0.81
HLCS-205ENST00000448340 H3BQV1 296 aa20.11■□□□□ 0.81
HLCS-205ENST00000448340 RGS20O76081 388 aa20.11■□□□□ 0.81
HLCS-205ENST00000448340 ADCYAP1R1P41586 468 aa20.11■□□□□ 0.81
HLCS-205ENST00000448340 USP11P51784 963 aa20.11■□□□□ 0.81
HLCS-205ENST00000448340 KCNV1Q6PIU1 500 aa20.11■□□□□ 0.81
HLCS-205ENST00000448340 NLRX1Q86UT6 975 aa20.11■□□□□ 0.81
HLCS-205ENST00000448340 PHF6Q8IWS0 365 aaKnown RBP eCLIP20.11■□□□□ 0.81
HLCS-205ENST00000448340 TBCKQ8TEA7 893 aa20.11■□□□□ 0.81
HLCS-205ENST00000448340 FOXP1Q9H334 677 aaPredicted RBP20.11■□□□□ 0.81
HLCS-205ENST00000448340 RTEL1Q9NZ71 1219 aa20.11■□□□□ 0.81
HLCS-205ENST00000448340 UBIAD1Q9Y5Z9 338 aa20.11■□□□□ 0.81
HLCS-205ENST00000448340 SPTBN5Q9NRC6 3674 aaKnown RBP20.1■□□□□ 0.81
HLCS-205ENST00000448340 ICAM3P32942 547 aa20.1■□□□□ 0.81
HLCS-205ENST00000448340 TNFAIP2Q03169 654 aa20.1■□□□□ 0.81
HLCS-205ENST00000448340 TTLL4Q14679 1199 aa20.1■□□□□ 0.81
HLCS-205ENST00000448340 PIK3AP1Q6ZUJ8 805 aa20.1■□□□□ 0.81
HLCS-205ENST00000448340 ZFP91Q96JP5 570 aaPredicted RBP20.1■□□□□ 0.81
HLCS-205ENST00000448340 MXRA8Q9BRK3 442 aa20.1■□□□□ 0.81
HLCS-205ENST00000448340 WDR11Q9BZH6 1224 aa20.1■□□□□ 0.81
HLCS-205ENST00000448340 DNM1LO00429 736 aa20.09■□□□□ 0.81
HLCS-205ENST00000448340 MAFGO15525 162 aa20.09■□□□□ 0.81
HLCS-205ENST00000448340 DUSP11O75319 330 aaKnown RBP20.09■□□□□ 0.81
HLCS-205ENST00000448340 TGFB3P10600 412 aa20.09■□□□□ 0.81
HLCS-205ENST00000448340 RARBP10826 455 aa20.09■□□□□ 0.81
HLCS-205ENST00000448340 SMPD1P17405 629 aa20.09■□□□□ 0.81
HLCS-205ENST00000448340 ITGB5P18084 799 aa20.09■□□□□ 0.81
HLCS-205ENST00000448340 CIITAP33076 1130 aa20.09■□□□□ 0.81
HLCS-205ENST00000448340 ZNF76P36508 570 aa20.09■□□□□ 0.81
HLCS-205ENST00000448340 DUSP28Q4G0W2 176 aa20.09■□□□□ 0.81
HLCS-205ENST00000448340 CEP55Q53EZ4 464 aa20.09■□□□□ 0.81
HLCS-205ENST00000448340 CCDC62Q6P9F0 684 aa20.09■□□□□ 0.81
HLCS-205ENST00000448340 NIPA1Q7RTP0 329 aa20.09■□□□□ 0.81
HLCS-205ENST00000448340 GPRASP2Q96D09 838 aa20.09■□□□□ 0.81
HLCS-205ENST00000448340 CDHR1Q96JP9 859 aa20.09■□□□□ 0.81
HLCS-205ENST00000448340 JADE2Q9NQC1 790 aa20.09■□□□□ 0.81
HLCS-205ENST00000448340 MRVI1Q9Y6F6 885 aa20.09■□□□□ 0.81
HLCS-205ENST00000448340 C11orf97A0A1B0GVM6 126 aaPredicted RBP20.08■□□□□ 0.81
HLCS-205ENST00000448340 SPATA31C2B4DYI2 1134 aa20.08■□□□□ 0.81
HLCS-205ENST00000448340 MEIS1O00470 390 aa20.08■□□□□ 0.81
HLCS-205ENST00000448340 NKRFO15226 690 aaKnown RBP eCLIP20.08■□□□□ 0.81
HLCS-205ENST00000448340 ADCY6O43306 1168 aa20.08■□□□□ 0.81
HLCS-205ENST00000448340 FIBPO43427 364 aa20.08■□□□□ 0.81
HLCS-205ENST00000448340 EDIL3O43854 480 aa20.08■□□□□ 0.81
HLCS-205ENST00000448340 TXNP10599 105 aaKnown RBP20.08■□□□□ 0.81
HLCS-205ENST00000448340 U2AF2P26368 475 aaKnown RBP eCLIP20.08■□□□□ 0.81
HLCS-205ENST00000448340 GNL2Q13823 731 aaKnown RBP20.08■□□□□ 0.81
HLCS-205ENST00000448340 INF2Q27J81 1249 aa20.08■□□□□ 0.81
HLCS-205ENST00000448340 EARS2Q5JPH6 523 aaKnown RBP20.08■□□□□ 0.81
HLCS-205ENST00000448340 LBHD1Q9BQE6 289 aaPredicted RBP20.08■□□□□ 0.81
HLCS-205ENST00000448340 DDX41Q9UJV9 622 aaKnown RBP20.08■□□□□ 0.81
HLCS-205ENST00000448340 GNEQ9Y223 722 aaKnown RBP20.08■□□□□ 0.81
HLCS-205ENST00000448340 Q9Y3F1 56 aa20.08■□□□□ 0.81
HLCS-205ENST00000448340 EYSQ5T1H1 3165 aa20.07■□□□□ 0.8
HLCS-205ENST00000448340 FAM86B1E9PN63 330 aa20.07■□□□□ 0.8
HLCS-205ENST00000448340 ARIH2O95376 493 aa20.07■□□□□ 0.8
HLCS-205ENST00000448340 FAM86B2P0C5J1 330 aa20.07■□□□□ 0.8
HLCS-205ENST00000448340 SYT1P21579 422 aa20.07■□□□□ 0.8
HLCS-205ENST00000448340 ATN1P54259 1190 aaPredicted RBP20.07■□□□□ 0.8
HLCS-205ENST00000448340 MTMR1Q13613 665 aa20.07■□□□□ 0.8
HLCS-205ENST00000448340 ANO1Q5XXA6 986 aa20.07■□□□□ 0.8
HLCS-205ENST00000448340 MOXD1Q6UVY6 613 aa20.07■□□□□ 0.8
HLCS-205ENST00000448340 NEK8Q86SG6 692 aa20.07■□□□□ 0.8
HLCS-205ENST00000448340 NOSTRINQ8IVI9 506 aa20.07■□□□□ 0.8
HLCS-205ENST00000448340 CYP2W1Q8TAV3 490 aa20.07■□□□□ 0.8
HLCS-205ENST00000448340 FAM161BQ96MY7 647 aa20.07■□□□□ 0.8
HLCS-205ENST00000448340 CYP3A7-CYP3A51PA0A087WV96 503 aa20.06■□□□□ 0.8
HLCS-205ENST00000448340 PDIA4P13667 645 aaKnown RBP20.06■□□□□ 0.8
HLCS-205ENST00000448340 CYP3A7P24462 503 aa20.06■□□□□ 0.8
HLCS-205ENST00000448340 RTP1P59025 263 aa20.06■□□□□ 0.8
HLCS-205ENST00000448340 SEMA3FQ13275 785 aa20.06■□□□□ 0.8
HLCS-205ENST00000448340 TMEM63BQ5T3F8 832 aa20.06■□□□□ 0.8
HLCS-205ENST00000448340 MCTP1Q6DN14 999 aa20.06■□□□□ 0.8
HLCS-205ENST00000448340 SPRYD3Q8NCJ5 442 aa20.06■□□□□ 0.8
HLCS-205ENST00000448340 NAP1L4Q99733 375 aaKnown RBP20.06■□□□□ 0.8
HLCS-205ENST00000448340 SENP7Q9BQF6 1050 aa20.06■□□□□ 0.8
HLCS-205ENST00000448340 FRMPD3Q5JV73 1810 aa20.06■□□□□ 0.8
HLCS-205ENST00000448340 CDH23Q9H251 3354 aa20.06■□□□□ 0.8
HLCS-205ENST00000448340 IGLV3-22A0A075B6J6 115 aa20.05■□□□□ 0.8
HLCS-205ENST00000448340 FAM205CA6NFA0 338 aa20.05■□□□□ 0.8
HLCS-205ENST00000448340 KIF28PB7ZC32 967 aa20.05■□□□□ 0.8
HLCS-205ENST00000448340 SETQ01105 290 aaPredicted RBP20.05■□□□□ 0.8
HLCS-205ENST00000448340 SHHQ15465 462 aa20.05■□□□□ 0.8
HLCS-205ENST00000448340 LY6KQ17RY6 165 aa20.05■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms