RNA–Protein interactions for RNA: ENST00000447784.1

LINC00408-201, long intergenic non-protein coding RNA 408, humanhuman

TSL 5 BASIC

Gene LINC00408, Length 560 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00408-201ENST00000447784 LETM2Q2VYF4 491 aa13.17□□□□□ -0.3
LINC00408-201ENST00000447784 CCDC144BQ3MJ40 725 aa13.17□□□□□ -0.3
LINC00408-201ENST00000447784 SEPT14Q6ZU15 432 aa13.17□□□□□ -0.3
LINC00408-201ENST00000447784 BRAPQ7Z569 592 aa13.17□□□□□ -0.3
LINC00408-201ENST00000447784 NEK8Q86SG6 692 aa13.17□□□□□ -0.3
LINC00408-201ENST00000447784 TSEN34Q9BSV6 310 aaKnown RBP13.17□□□□□ -0.3
LINC00408-201ENST00000447784 MTMR6Q9Y217 621 aa13.17□□□□□ -0.3
LINC00408-201ENST00000447784 FRMPD4Q14CM0 1322 aa13.16□□□□□ -0.3
LINC00408-201ENST00000447784 MARCH6O60337 910 aa13.16□□□□□ -0.3
LINC00408-201ENST00000447784 PGK1P00558 417 aa13.16□□□□□ -0.3
LINC00408-201ENST00000447784 CYP3A4P08684 503 aa13.16□□□□□ -0.3
LINC00408-201ENST00000447784 GCFC2P16383 781 aaKnown RBP13.16□□□□□ -0.3
LINC00408-201ENST00000447784 CST5P28325 142 aaPredicted RBP13.16□□□□□ -0.3
LINC00408-201ENST00000447784 CEP55Q53EZ4 464 aa13.16□□□□□ -0.3
LINC00408-201ENST00000447784 C1orf53Q5VUE5 145 aa13.16□□□□□ -0.3
LINC00408-201ENST00000447784 KCNV1Q6PIU1 500 aa13.16□□□□□ -0.3
LINC00408-201ENST00000447784 FERMT3Q86UX7 667 aa13.16□□□□□ -0.3
LINC00408-201ENST00000447784 FBXO16Q8IX29 292 aaPredicted RBP13.16□□□□□ -0.3
LINC00408-201ENST00000447784 C7orf61Q8IZ16 206 aa13.16□□□□□ -0.3
LINC00408-201ENST00000447784 KLHDC9Q8NEP7 349 aa13.16□□□□□ -0.3
LINC00408-201ENST00000447784 IL31RAQ8NI17 732 aa13.16□□□□□ -0.3
LINC00408-201ENST00000447784 SCFD2Q8WU76 684 aa13.16□□□□□ -0.3
LINC00408-201ENST00000447784 TNFRSF25Q93038 417 aa13.16□□□□□ -0.3
LINC00408-201ENST00000447784 CDHR1Q96JP9 859 aa13.16□□□□□ -0.3
LINC00408-201ENST00000447784 ZSCAN16Q9H4T2 348 aaPredicted RBP13.16□□□□□ -0.3
LINC00408-201ENST00000447784 SPC25Q9HBM1 224 aa13.16□□□□□ -0.3
LINC00408-201ENST00000447784 PHF24Q9UPV7 400 aa13.16□□□□□ -0.3
LINC00408-201ENST00000447784 MRVI1Q9Y6F6 885 aa13.16□□□□□ -0.3
LINC00408-201ENST00000447784 DDX49Q9Y6V7 483 aaKnown RBP13.16□□□□□ -0.3
LINC00408-201ENST00000447784 PDE4DIPQ5VU43 2346 aa13.16□□□□□ -0.3
LINC00408-201ENST00000447784 SYNRGQ9UMZ2 1314 aa13.15□□□□□ -0.3
LINC00408-201ENST00000447784 MOXD2PA6NHM9 499 aa13.15□□□□□ -0.3
LINC00408-201ENST00000447784 MAFGO15525 162 aa13.15□□□□□ -0.3
LINC00408-201ENST00000447784 CCNT1O60563 726 aaKnown RBP13.15□□□□□ -0.3
LINC00408-201ENST00000447784 ZSCAN22P10073 491 aaPredicted RBP13.15□□□□□ -0.3
LINC00408-201ENST00000447784 ADCYAP1R1P41586 468 aa13.15□□□□□ -0.3
LINC00408-201ENST00000447784 TRAPPC10P48553 1259 aa13.15□□□□□ -0.3
LINC00408-201ENST00000447784 GJA9P57773 515 aa13.15□□□□□ -0.3
LINC00408-201ENST00000447784 NUCB2P80303 420 aa13.15□□□□□ -0.3
LINC00408-201ENST00000447784 MTMR1Q13613 665 aa13.15□□□□□ -0.3
LINC00408-201ENST00000447784 TTLL4Q14679 1199 aa13.15□□□□□ -0.3
LINC00408-201ENST00000447784 SNX17Q15036 470 aa13.15□□□□□ -0.3
LINC00408-201ENST00000447784 PRR16Q569H4 304 aa13.15□□□□□ -0.3
LINC00408-201ENST00000447784 RILPL1Q5EBL4 403 aa13.15□□□□□ -0.3
LINC00408-201ENST00000447784 FOXD4L5Q5VV16 416 aaPredicted RBP13.15□□□□□ -0.3
LINC00408-201ENST00000447784 IQSEC1Q6DN90 963 aa13.15□□□□□ -0.3
LINC00408-201ENST00000447784 CCSAPQ6IQ19 270 aaPredicted RBP13.15□□□□□ -0.3
LINC00408-201ENST00000447784 SLC39A5Q6ZMH5 540 aa13.15□□□□□ -0.3
LINC00408-201ENST00000447784 FOXD4L4Q8WXT5 416 aaPredicted RBP13.15□□□□□ -0.3
LINC00408-201ENST00000447784 ZFP91Q96JP5 570 aaPredicted RBP13.15□□□□□ -0.3
LINC00408-201ENST00000447784 MXRA8Q9BRK3 442 aa13.15□□□□□ -0.3
LINC00408-201ENST00000447784 UPF3AQ9H1J1 476 aaKnown RBP13.15□□□□□ -0.3
LINC00408-201ENST00000447784 PRO3102Q9H379 93 aa13.15□□□□□ -0.3
LINC00408-201ENST00000447784 COLQQ9Y215 455 aaPredicted RBP13.15□□□□□ -0.3
LINC00408-201ENST00000447784 KIF28PB7ZC32 967 aa13.14□□□□□ -0.31
LINC00408-201ENST00000447784 ADCY6O43306 1168 aa13.14□□□□□ -0.31
LINC00408-201ENST00000447784 FIBPO43427 364 aa13.14□□□□□ -0.31
LINC00408-201ENST00000447784 TXNP10599 105 aaKnown RBP13.14□□□□□ -0.31
LINC00408-201ENST00000447784 ITGB5P18084 799 aa13.14□□□□□ -0.31
LINC00408-201ENST00000447784 CIITAP33076 1130 aa13.14□□□□□ -0.31
LINC00408-201ENST00000447784 MRPS9P82933 396 aaKnown RBP13.14□□□□□ -0.31
LINC00408-201ENST00000447784 SETQ01105 290 aaPredicted RBP13.14□□□□□ -0.31
LINC00408-201ENST00000447784 TNFAIP2Q03169 654 aa13.14□□□□□ -0.31
LINC00408-201ENST00000447784 HABP4Q5JVS0 413 aaKnown RBP13.14□□□□□ -0.31
LINC00408-201ENST00000447784 TTC38Q5R3I4 469 aa13.14□□□□□ -0.31
LINC00408-201ENST00000447784 TAPT1Q6NXT6 567 aa13.14□□□□□ -0.31
LINC00408-201ENST00000447784 MOXD1Q6UVY6 613 aa13.14□□□□□ -0.31
LINC00408-201ENST00000447784 NIPA1Q7RTP0 329 aa13.14□□□□□ -0.31
LINC00408-201ENST00000447784 PLA2G4DQ86XP0 818 aa13.14□□□□□ -0.31
LINC00408-201ENST00000447784 LENG1Q96BZ8 264 aaPredicted RBP13.14□□□□□ -0.31
LINC00408-201ENST00000447784 GPRASP2Q96D09 838 aa13.14□□□□□ -0.31
LINC00408-201ENST00000447784 INPP4AQ96PE3 977 aaPredicted RBP13.14□□□□□ -0.31
LINC00408-201ENST00000447784 WDR11Q9BZH6 1224 aa13.14□□□□□ -0.31
LINC00408-201ENST00000447784 JADE2Q9NQC1 790 aa13.14□□□□□ -0.31
LINC00408-201ENST00000447784 DDX25Q9UHL0 483 aaKnown RBP13.14□□□□□ -0.31
LINC00408-201ENST00000447784 TCEAL9Q9UHQ7 104 aa13.14□□□□□ -0.31
LINC00408-201ENST00000447784 GNEQ9Y223 722 aaKnown RBP13.14□□□□□ -0.31
LINC00408-201ENST00000447784 Q9Y3F1 56 aa13.14□□□□□ -0.31
LINC00408-201ENST00000447784 ATP6V1DQ9Y5K8 247 aa13.14□□□□□ -0.31
LINC00408-201ENST00000447784 UBIAD1Q9Y5Z9 338 aa13.14□□□□□ -0.31
LINC00408-201ENST00000447784 FAM205CA6NFA0 338 aa13.13□□□□□ -0.31
LINC00408-201ENST00000447784 SPATA31C2B4DYI2 1134 aa13.13□□□□□ -0.31
LINC00408-201ENST00000447784 MEIS1O00470 390 aa13.13□□□□□ -0.31
LINC00408-201ENST00000447784 TGFB3P10600 412 aa13.13□□□□□ -0.31
LINC00408-201ENST00000447784 ACLYP53396 1101 aa13.13□□□□□ -0.31
LINC00408-201ENST00000447784 ATN1P54259 1190 aaPredicted RBP13.13□□□□□ -0.31
LINC00408-201ENST00000447784 RTP1P59025 263 aa13.13□□□□□ -0.31
LINC00408-201ENST00000447784 EARS2Q5JPH6 523 aaKnown RBP13.13□□□□□ -0.31
LINC00408-201ENST00000447784 PPP4R3AQ6IN85 833 aa13.13□□□□□ -0.31
LINC00408-201ENST00000447784 CHRDL2Q6WN34 429 aa13.13□□□□□ -0.31
LINC00408-201ENST00000447784 PCSK9Q8NBP7 692 aaKnown RBP13.13□□□□□ -0.31
LINC00408-201ENST00000447784 GIMAP8Q8ND71 665 aaPredicted RBP13.13□□□□□ -0.31
LINC00408-201ENST00000447784 CRYGNQ8WXF5 182 aa13.13□□□□□ -0.31
LINC00408-201ENST00000447784 ZNF396Q96N95 335 aaPredicted RBP13.13□□□□□ -0.31
LINC00408-201ENST00000447784 GDF15Q99988 308 aa13.13□□□□□ -0.31
LINC00408-201ENST00000447784 PDGFCQ9NRA1 345 aa13.13□□□□□ -0.31
LINC00408-201ENST00000447784 CYP3A7-CYP3A51PA0A087WV96 503 aa13.12□□□□□ -0.31
LINC00408-201ENST00000447784 C11orf97A0A1B0GVM6 126 aaPredicted RBP13.12□□□□□ -0.31
LINC00408-201ENST00000447784 A0A1W2PPC1 479 aa13.12□□□□□ -0.31
LINC00408-201ENST00000447784 A0A1W2PQ45 241 aaPredicted RBP13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms