RNA–Protein interactions for RNA: ENST00000447439.6

KLHL3-202, Transcript of kelch like family member 3, humanhuman

TSL 1 (best)

Gene KLHL3, Length 2,697 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KLHL3-202ENST00000447439 PANK4Q9NVE7 773 aa10.46□□□□□ -0.74
KLHL3-202ENST00000447439 PNMA6FA0A0J9YX94 578 aa10.45□□□□□ -0.74
KLHL3-202ENST00000447439 POTEFA5A3E0 1075 aa10.45□□□□□ -0.74
KLHL3-202ENST00000447439 POTEIP0CG38 1075 aa10.45□□□□□ -0.74
KLHL3-202ENST00000447439 TUBB2AQ13885 445 aa10.45□□□□□ -0.74
KLHL3-202ENST00000447439 MAN2A1Q16706 1144 aa10.45□□□□□ -0.74
KLHL3-202ENST00000447439 USH1GQ495M9 461 aa10.45□□□□□ -0.74
KLHL3-202ENST00000447439 SPATA31A6Q5VVP1 1343 aa10.45□□□□□ -0.74
KLHL3-202ENST00000447439 POTEGQ6S5H5 508 aa10.45□□□□□ -0.74
KLHL3-202ENST00000447439 POTEEQ6S8J3 1075 aa10.45□□□□□ -0.74
KLHL3-202ENST00000447439 KIAA0825Q8IV33 1275 aa10.45□□□□□ -0.74
KLHL3-202ENST00000447439 BAP1Q92560 729 aa10.45□□□□□ -0.74
KLHL3-202ENST00000447439 DNAJC19Q96DA6 116 aa10.45□□□□□ -0.74
KLHL3-202ENST00000447439 LRRC1Q9BTT6 524 aa10.45□□□□□ -0.74
KLHL3-202ENST00000447439 TUBB2BQ9BVA1 445 aa10.45□□□□□ -0.74
KLHL3-202ENST00000447439 IKZF4Q9H2S9 585 aa10.45□□□□□ -0.74
KLHL3-202ENST00000447439 SH2D4AQ9H788 454 aa10.45□□□□□ -0.74
KLHL3-202ENST00000447439 DNAJC18Q9H819 358 aa10.45□□□□□ -0.74
KLHL3-202ENST00000447439 RIC8AQ9NPQ8 531 aa10.45□□□□□ -0.74
KLHL3-202ENST00000447439 PCDHA12Q9UN75 941 aa10.45□□□□□ -0.74
KLHL3-202ENST00000447439 PACSIN2Q9UNF0 486 aaPredicted RBP10.45□□□□□ -0.74
KLHL3-202ENST00000447439 CDK5RAP2Q96SN8 1893 aa10.45□□□□□ -0.74
KLHL3-202ENST00000447439 IGKV6D-41A0A0C4DH26 115 aa10.45□□□□□ -0.74
KLHL3-202ENST00000447439 ESYT2A0FGR8 921 aa10.45□□□□□ -0.74
KLHL3-202ENST00000447439 CASP5P51878 434 aa10.45□□□□□ -0.74
KLHL3-202ENST00000447439 POLR2FP61218 127 aaKnown RBP10.45□□□□□ -0.74
KLHL3-202ENST00000447439 PSMC6P62333 389 aa10.45□□□□□ -0.74
KLHL3-202ENST00000447439 ZSCAN26Q16670 478 aa10.45□□□□□ -0.74
KLHL3-202ENST00000447439 TMEM119Q4V9L6 283 aa10.45□□□□□ -0.74
KLHL3-202ENST00000447439 CREG2Q8IUH2 290 aa10.45□□□□□ -0.74
KLHL3-202ENST00000447439 CCDC170Q8IYT3 715 aa10.45□□□□□ -0.74
KLHL3-202ENST00000447439 MYOCDQ8IZQ8 938 aa10.45□□□□□ -0.74
KLHL3-202ENST00000447439 FNBP4Q8N3X1 1017 aaPredicted RBP10.45□□□□□ -0.74
KLHL3-202ENST00000447439 RETREG2Q8NC44 543 aa10.45□□□□□ -0.74
KLHL3-202ENST00000447439 CUL5Q93034 780 aa10.45□□□□□ -0.74
KLHL3-202ENST00000447439 MTMR8Q96EF0 704 aa10.45□□□□□ -0.74
KLHL3-202ENST00000447439 FAM163AQ96GL9 167 aaPredicted RBP10.45□□□□□ -0.74
KLHL3-202ENST00000447439 LSM14BQ9BX40 385 aaKnown RBP10.45□□□□□ -0.74
KLHL3-202ENST00000447439 RABEP2Q9H5N1 569 aa10.45□□□□□ -0.74
KLHL3-202ENST00000447439 STK17AQ9UEE5 414 aa10.45□□□□□ -0.74
KLHL3-202ENST00000447439 DMGDHQ9UI17 866 aaKnown RBP10.45□□□□□ -0.74
KLHL3-202ENST00000447439 LCMT1Q9UIC8 334 aa10.45□□□□□ -0.74
KLHL3-202ENST00000447439 PLAGL2Q9UPG8 496 aa10.45□□□□□ -0.74
KLHL3-202ENST00000447439 ANKRD65E5RJM6 399 aa10.44□□□□□ -0.74
KLHL3-202ENST00000447439 POLRMTO00411 1230 aaKnown RBP10.44□□□□□ -0.74
KLHL3-202ENST00000447439 TLR2O60603 784 aa10.44□□□□□ -0.74
KLHL3-202ENST00000447439 MED24O75448 989 aa10.44□□□□□ -0.74
KLHL3-202ENST00000447439 BBOX1O75936 387 aa10.44□□□□□ -0.74
KLHL3-202ENST00000447439 GDF11O95390 407 aa10.44□□□□□ -0.74
KLHL3-202ENST00000447439 SNHG28P0DPA3 235 aa10.44□□□□□ -0.74
KLHL3-202ENST00000447439 ACTN1P12814 892 aa10.44□□□□□ -0.74
KLHL3-202ENST00000447439 CAPN2P17655 700 aa10.44□□□□□ -0.74
KLHL3-202ENST00000447439 MAGEA1P43355 309 aa10.44□□□□□ -0.74
KLHL3-202ENST00000447439 NOVP48745 357 aa10.44□□□□□ -0.74
KLHL3-202ENST00000447439 RBM5P52756 815 aaKnown RBP eCLIP10.44□□□□□ -0.74
KLHL3-202ENST00000447439 QRICH1Q2TAL8 776 aa10.44□□□□□ -0.74
KLHL3-202ENST00000447439 HERC4Q5GLZ8 1057 aaPredicted RBP10.44□□□□□ -0.74
KLHL3-202ENST00000447439 MEX3CQ5U5Q3 659 aaKnown RBP10.44□□□□□ -0.74
KLHL3-202ENST00000447439 GPBP1Q86WP2 473 aa10.44□□□□□ -0.74
KLHL3-202ENST00000447439 SEPT12Q8IYM1 358 aa10.44□□□□□ -0.74
KLHL3-202ENST00000447439 GUF1Q8N442 669 aaKnown RBP10.44□□□□□ -0.74
KLHL3-202ENST00000447439 PURBQ96QR8 312 aaKnown RBP10.44□□□□□ -0.74
KLHL3-202ENST00000447439 FAM204AQ9H8W3 233 aa10.44□□□□□ -0.74
KLHL3-202ENST00000447439 SNX12Q9UMY4 172 aa10.44□□□□□ -0.74
KLHL3-202ENST00000447439 ADAMTSL1Q8N6G6 1762 aa10.44□□□□□ -0.74
KLHL3-202ENST00000447439 PVALEFA0A1B0GWK0 134 aa10.44□□□□□ -0.74
KLHL3-202ENST00000447439 A0A1W2PQJ5 194 aa10.44□□□□□ -0.74
KLHL3-202ENST00000447439 G3V3G9 751 aa10.44□□□□□ -0.74
KLHL3-202ENST00000447439 EIF3JO75822 258 aaKnown RBP10.44□□□□□ -0.74
KLHL3-202ENST00000447439 TRIM37O94972 964 aa10.44□□□□□ -0.74
KLHL3-202ENST00000447439 SYF2O95926 243 aaKnown RBP10.44□□□□□ -0.74
KLHL3-202ENST00000447439 FTCDO95954 541 aa10.44□□□□□ -0.74
KLHL3-202ENST00000447439 PPARDQ03181 441 aa10.44□□□□□ -0.74
KLHL3-202ENST00000447439 FAM26FQ5R3K3 315 aa10.44□□□□□ -0.74
KLHL3-202ENST00000447439 DCAF8Q5TAQ9 597 aa10.44□□□□□ -0.74
KLHL3-202ENST00000447439 WDR93Q6P2C0 686 aa10.44□□□□□ -0.74
KLHL3-202ENST00000447439 SAMD1Q6SPF0 538 aaPredicted RBP10.44□□□□□ -0.74
KLHL3-202ENST00000447439 SLF2Q8IX21 1173 aa10.44□□□□□ -0.74
KLHL3-202ENST00000447439 TXLNBQ8N3L3 684 aa10.44□□□□□ -0.74
KLHL3-202ENST00000447439 TBC1D22AQ8WUA7 517 aa10.44□□□□□ -0.74
KLHL3-202ENST00000447439 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP10.44□□□□□ -0.74
KLHL3-202ENST00000447439 PACSIN1Q9BY11 444 aa10.44□□□□□ -0.74
KLHL3-202ENST00000447439 ZC3H12CQ9C0D7 883 aaKnown RBP10.44□□□□□ -0.74
KLHL3-202ENST00000447439 GOLPH3Q9H4A6 298 aa10.44□□□□□ -0.74
KLHL3-202ENST00000447439 HPCAL4Q9UM19 191 aa10.44□□□□□ -0.74
KLHL3-202ENST00000447439 PCDHA1Q9Y5I3 950 aa10.44□□□□□ -0.74
KLHL3-202ENST00000447439 A0A0U1RQG5 324 aaPredicted RBP10.43□□□□□ -0.74
KLHL3-202ENST00000447439 DDTLA6NHG4 134 aaPredicted RBP10.43□□□□□ -0.74
KLHL3-202ENST00000447439 ZBTB5O15062 677 aa10.43□□□□□ -0.74
KLHL3-202ENST00000447439 RNF40O75150 1001 aa10.43□□□□□ -0.74
KLHL3-202ENST00000447439 NOL4O94818 638 aa10.43□□□□□ -0.74
KLHL3-202ENST00000447439 KRT18P05783 430 aaKnown RBP10.43□□□□□ -0.74
KLHL3-202ENST00000447439 PLA2G4BP0C869 781 aa10.43□□□□□ -0.74
KLHL3-202ENST00000447439 EEF2P13639 858 aaKnown RBP10.43□□□□□ -0.74
KLHL3-202ENST00000447439 CLK2P49760 499 aaKnown RBP10.43□□□□□ -0.74
KLHL3-202ENST00000447439 CYP4A11Q02928 519 aa10.43□□□□□ -0.74
KLHL3-202ENST00000447439 PRR16Q569H4 304 aa10.43□□□□□ -0.74
KLHL3-202ENST00000447439 HSP90B2PQ58FF3 399 aa10.43□□□□□ -0.74
KLHL3-202ENST00000447439 APOBEC3HQ6NTF7 200 aaKnown RBP10.43□□□□□ -0.74
KLHL3-202ENST00000447439 PDXDC1Q6P996 788 aa10.43□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms