RNA–Protein interactions for RNA: ENST00000447394.1

HLA-DOB-207, Transcript of major histocompatibility complex, class II, DO beta, humanhuman

Gene HLA-DOB, Length 543 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOB-207ENST00000447394 TSHZ2Q9NRE2 1034 aa15.11■□□□□ 0.01
HLA-DOB-207ENST00000447394 DDX41Q9UJV9 622 aaKnown RBP15.11■□□□□ 0.01
HLA-DOB-207ENST00000447394 GNEQ9Y223 722 aaKnown RBP15.11■□□□□ 0.01
HLA-DOB-207ENST00000447394 SPATA31C2B4DYI2 1134 aa15.1■□□□□ 0.01
HLA-DOB-207ENST00000447394 CTAGE5O15320 804 aa15.1■□□□□ 0.01
HLA-DOB-207ENST00000447394 ATP9AO75110 1047 aa15.1■□□□□ 0.01
HLA-DOB-207ENST00000447394 ADAMTS4O75173 837 aa15.1■□□□□ 0.01
HLA-DOB-207ENST00000447394 SGPL1O95470 568 aa15.1■□□□□ 0.01
HLA-DOB-207ENST00000447394 CYP3A4P08684 503 aa15.1■□□□□ 0.01
HLA-DOB-207ENST00000447394 ATP2B1P20020 1258 aa15.1■□□□□ 0.01
HLA-DOB-207ENST00000447394 MTMR1Q13613 665 aa15.1■□□□□ 0.01
HLA-DOB-207ENST00000447394 GNL2Q13823 731 aaKnown RBP15.1■□□□□ 0.01
HLA-DOB-207ENST00000447394 NBR1Q14596 966 aa15.1■□□□□ 0.01
HLA-DOB-207ENST00000447394 TTLL4Q14679 1199 aa15.1■□□□□ 0.01
HLA-DOB-207ENST00000447394 SAFBQ15424 915 aaKnown RBP eCLIP15.1■□□□□ 0.01
HLA-DOB-207ENST00000447394 LETM2Q2VYF4 491 aa15.1■□□□□ 0.01
HLA-DOB-207ENST00000447394 DUSP28Q4G0W2 176 aa15.1■□□□□ 0.01
HLA-DOB-207ENST00000447394 CEP55Q53EZ4 464 aa15.1■□□□□ 0.01
HLA-DOB-207ENST00000447394 PRR16Q569H4 304 aa15.1■□□□□ 0.01
HLA-DOB-207ENST00000447394 MCTP2Q6DN12 878 aa15.1■□□□□ 0.01
HLA-DOB-207ENST00000447394 IQSEC1Q6DN90 963 aa15.1■□□□□ 0.01
HLA-DOB-207ENST00000447394 XRRA1Q6P2D8 792 aa15.1■□□□□ 0.01
HLA-DOB-207ENST00000447394 FERMT3Q86UX7 667 aa15.1■□□□□ 0.01
HLA-DOB-207ENST00000447394 DIS3LQ8TF46 1054 aaKnown RBP15.1■□□□□ 0.01
HLA-DOB-207ENST00000447394 LENG9Q96B70 501 aa15.1■□□□□ 0.01
HLA-DOB-207ENST00000447394 TMEM106CQ9BVX2 250 aa15.1■□□□□ 0.01
HLA-DOB-207ENST00000447394 JADE2Q9NQC1 790 aa15.1■□□□□ 0.01
HLA-DOB-207ENST00000447394 DYNC1LI2O43237 492 aaPredicted RBP15.09■□□□□ 0.01
HLA-DOB-207ENST00000447394 FIBPO43427 364 aa15.09■□□□□ 0.01
HLA-DOB-207ENST00000447394 SLC37A4O43826 429 aa15.09■□□□□ 0.01
HLA-DOB-207ENST00000447394 DUSP11O75319 330 aaKnown RBP15.09■□□□□ 0.01
HLA-DOB-207ENST00000447394 CAPN15O75808 1086 aa15.09■□□□□ 0.01
HLA-DOB-207ENST00000447394 STAM2O75886 525 aa15.09■□□□□ 0.01
HLA-DOB-207ENST00000447394 GGPS1O95749 300 aa15.09■□□□□ 0.01
HLA-DOB-207ENST00000447394 TFRCP02786 760 aaKnown RBP15.09■□□□□ 0.01
HLA-DOB-207ENST00000447394 ICAM3P32942 547 aa15.09■□□□□ 0.01
HLA-DOB-207ENST00000447394 GJA8P48165 433 aa15.09■□□□□ 0.01
HLA-DOB-207ENST00000447394 SP4Q02446 784 aa15.09■□□□□ 0.01
HLA-DOB-207ENST00000447394 ARHGAP1Q07960 439 aa15.09■□□□□ 0.01
HLA-DOB-207ENST00000447394 PKP1Q13835 747 aa15.09■□□□□ 0.01
HLA-DOB-207ENST00000447394 GNPTABQ3T906 1256 aa15.09■□□□□ 0.01
HLA-DOB-207ENST00000447394 FOXD4L5Q5VV16 416 aaPredicted RBP15.09■□□□□ 0.01
HLA-DOB-207ENST00000447394 NEK8Q86SG6 692 aa15.09■□□□□ 0.01
HLA-DOB-207ENST00000447394 NLRX1Q86UT6 975 aa15.09■□□□□ 0.01
HLA-DOB-207ENST00000447394 PLA2G4DQ86XP0 818 aa15.09■□□□□ 0.01
HLA-DOB-207ENST00000447394 NOSTRINQ8IVI9 506 aa15.09■□□□□ 0.01
HLA-DOB-207ENST00000447394 OR6J1Q8NGC5 347 aa15.09■□□□□ 0.01
HLA-DOB-207ENST00000447394 FOXD4L4Q8WXT5 416 aaPredicted RBP15.09■□□□□ 0.01
HLA-DOB-207ENST00000447394 GPRASP2Q96D09 838 aa15.09■□□□□ 0.01
HLA-DOB-207ENST00000447394 CRISPLD2Q9H0B8 497 aa15.09■□□□□ 0.01
HLA-DOB-207ENST00000447394 FOXP1Q9H334 677 aaPredicted RBP15.09■□□□□ 0.01
HLA-DOB-207ENST00000447394 KCNH7Q9NS40 1196 aa15.09■□□□□ 0.01
HLA-DOB-207ENST00000447394 MEIS1O00470 390 aa15.08■□□□□ 0
HLA-DOB-207ENST00000447394 C6orf222P0C671 652 aaPredicted RBP15.08■□□□□ 0
HLA-DOB-207ENST00000447394 KCNA2P16389 499 aa15.08■□□□□ 0
HLA-DOB-207ENST00000447394 U2AF2P26368 475 aaKnown RBP eCLIP15.08■□□□□ 0
HLA-DOB-207ENST00000447394 MNX1P50219 401 aaPredicted RBP15.08■□□□□ 0
HLA-DOB-207ENST00000447394 ITGB3BPQ13352 177 aaPredicted RBP15.08■□□□□ 0
HLA-DOB-207ENST00000447394 BECN1Q14457 450 aa15.08■□□□□ 0
HLA-DOB-207ENST00000447394 LRRC41Q15345 812 aa15.08■□□□□ 0
HLA-DOB-207ENST00000447394 UPF3AQ9H1J1 476 aaKnown RBP15.08■□□□□ 0
HLA-DOB-207ENST00000447394 AGO4Q9HCK5 861 aaKnown RBP15.08■□□□□ 0
HLA-DOB-207ENST00000447394 OGDHLQ9ULD0 1010 aa15.08■□□□□ 0
HLA-DOB-207ENST00000447394 MTMR6Q9Y217 621 aa15.08■□□□□ 0
HLA-DOB-207ENST00000447394 DDX39AO00148 427 aaKnown RBP15.07■□□□□ 0
HLA-DOB-207ENST00000447394 CCNT1O60563 726 aaKnown RBP15.07■□□□□ 0
HLA-DOB-207ENST00000447394 MSCO60682 206 aa15.07■□□□□ 0
HLA-DOB-207ENST00000447394 GH1P01241 217 aa15.07■□□□□ 0
HLA-DOB-207ENST00000447394 CIITAP33076 1130 aa15.07■□□□□ 0
HLA-DOB-207ENST00000447394 GJA9P57773 515 aa15.07■□□□□ 0
HLA-DOB-207ENST00000447394 CYFIP1Q7L576 1253 aa15.07■□□□□ 0
HLA-DOB-207ENST00000447394 POTEDQ86YR6 584 aa15.07■□□□□ 0
HLA-DOB-207ENST00000447394 PPP1R13LQ8WUF5 828 aa15.07■□□□□ 0
HLA-DOB-207ENST00000447394 AFG1LQ8WV93 481 aa15.07■□□□□ 0
HLA-DOB-207ENST00000447394 AP5M1Q9H0R1 490 aa15.07■□□□□ 0
HLA-DOB-207ENST00000447394 DDX25Q9UHL0 483 aaKnown RBP15.07■□□□□ 0
HLA-DOB-207ENST00000447394 MSH4O15457 936 aa15.06■□□□□ 0
HLA-DOB-207ENST00000447394 STX6O43752 255 aa15.06■□□□□ 0
HLA-DOB-207ENST00000447394 FARP2O94887 1054 aaPredicted RBP15.06■□□□□ 0
HLA-DOB-207ENST00000447394 PDCP20941 246 aa15.06■□□□□ 0
HLA-DOB-207ENST00000447394 TOB1P50616 345 aaPredicted RBP15.06■□□□□ 0
HLA-DOB-207ENST00000447394 USP11P51784 963 aa15.06■□□□□ 0
HLA-DOB-207ENST00000447394 RESTQ13127 1097 aa15.06■□□□□ 0
HLA-DOB-207ENST00000447394 CELF3Q5SZQ8 465 aaKnown RBP15.06■□□□□ 0
HLA-DOB-207ENST00000447394 MYSM1Q5VVJ2 828 aa15.06■□□□□ 0
HLA-DOB-207ENST00000447394 FAM173BQ6P4H8 233 aa15.06■□□□□ 0
HLA-DOB-207ENST00000447394 NIPA1Q7RTP0 329 aa15.06■□□□□ 0
HLA-DOB-207ENST00000447394 DHX37Q8IY37 1157 aaKnown RBP15.06■□□□□ 0
HLA-DOB-207ENST00000447394 MBOAT7Q96N66 472 aa15.06■□□□□ 0
HLA-DOB-207ENST00000447394 CYP3A7-CYP3A51PA0A087WV96 503 aa15.05■□□□□ -0
HLA-DOB-207ENST00000447394 CYP3A7P24462 503 aa15.05■□□□□ -0
HLA-DOB-207ENST00000447394 MCM7P33993 719 aa15.05■□□□□ -0
HLA-DOB-207ENST00000447394 SETQ01105 290 aaPredicted RBP15.05■□□□□ -0
HLA-DOB-207ENST00000447394 FSCN1Q16658 493 aaKnown RBP15.05■□□□□ -0
HLA-DOB-207ENST00000447394 HSDL1Q3SXM5 330 aa15.05■□□□□ -0
HLA-DOB-207ENST00000447394 CCSAPQ6IQ19 270 aaPredicted RBP15.05■□□□□ -0
HLA-DOB-207ENST00000447394 KLHDC9Q8NEP7 349 aa15.05■□□□□ -0
HLA-DOB-207ENST00000447394 FERMT2Q96AC1 680 aa15.05■□□□□ -0
HLA-DOB-207ENST00000447394 SPATA33Q96N06 139 aa15.05■□□□□ -0
HLA-DOB-207ENST00000447394 ZNF577Q9BSK1 485 aa15.05■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms