RNA–Protein interactions for RNA: ENST00000447024.5

SMARCE1-206, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 3

Gene SMARCE1, Length 536 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-206ENST00000447024 C16orf71Q8IYS4 520 aaPredicted RBP9.81□□□□□ -0.84
SMARCE1-206ENST00000447024 SYNE4Q8N205 404 aa9.81□□□□□ -0.84
SMARCE1-206ENST00000447024 ZSCAN18Q8TBC5 510 aaPredicted RBP9.81□□□□□ -0.84
SMARCE1-206ENST00000447024 ZNF526Q8TF50 670 aaPredicted RBP9.81□□□□□ -0.84
SMARCE1-206ENST00000447024 JDP2Q8WYK2 163 aa9.81□□□□□ -0.84
SMARCE1-206ENST00000447024 MIPEPQ99797 713 aa9.81□□□□□ -0.84
SMARCE1-206ENST00000447024 OSBPL7Q9BZF2 842 aa9.81□□□□□ -0.84
SMARCE1-206ENST00000447024 RTL9Q8NET4 1388 aa9.8□□□□□ -0.84
SMARCE1-206ENST00000447024 TIAM2Q8IVF5 1701 aa9.8□□□□□ -0.84
SMARCE1-206ENST00000447024 IQCA1LA6NCM1 817 aa9.8□□□□□ -0.84
SMARCE1-206ENST00000447024 H3BS24 57 aa9.8□□□□□ -0.84
SMARCE1-206ENST00000447024 IGKV5-2P06315 115 aa9.8□□□□□ -0.84
SMARCE1-206ENST00000447024 CELA3AP09093 270 aa9.8□□□□□ -0.84
SMARCE1-206ENST00000447024 MAPK1P28482 360 aa9.8□□□□□ -0.84
SMARCE1-206ENST00000447024 FGD1P98174 961 aa9.8□□□□□ -0.84
SMARCE1-206ENST00000447024 FSTL1Q12841 308 aa9.8□□□□□ -0.84
SMARCE1-206ENST00000447024 SLBPQ14493 270 aaKnown RBP eCLIP9.8□□□□□ -0.84
SMARCE1-206ENST00000447024 TRMT2AQ8IZ69 625 aaKnown RBP9.8□□□□□ -0.84
SMARCE1-206ENST00000447024 PLA2G12BQ9BX93 195 aa9.8□□□□□ -0.84
SMARCE1-206ENST00000447024 CYP8B1Q9UNU6 501 aa9.8□□□□□ -0.84
SMARCE1-206ENST00000447024 DDX60Q8IY21 1712 aaKnown RBP9.79□□□□□ -0.84
SMARCE1-206ENST00000447024 WDR90Q96KV7 1748 aa9.79□□□□□ -0.84
SMARCE1-206ENST00000447024 FZD9O00144 591 aa9.79□□□□□ -0.84
SMARCE1-206ENST00000447024 KRT1P04264 644 aa9.79□□□□□ -0.84
SMARCE1-206ENST00000447024 RPS8P62241 208 aaKnown RBP9.79□□□□□ -0.84
SMARCE1-206ENST00000447024 ALDH1L2Q3SY69 923 aa9.79□□□□□ -0.84
SMARCE1-206ENST00000447024 PCNX4Q63HM2 1172 aa9.79□□□□□ -0.84
SMARCE1-206ENST00000447024 G2E3Q7L622 706 aa9.79□□□□□ -0.84
SMARCE1-206ENST00000447024 FBF1Q8TES7 1133 aa9.79□□□□□ -0.84
SMARCE1-206ENST00000447024 CDC5LQ99459 802 aaKnown RBP9.79□□□□□ -0.84
SMARCE1-206ENST00000447024 NMRK2Q9NPI5 230 aa9.79□□□□□ -0.84
SMARCE1-206ENST00000447024 ZNF277Q9NRM2 450 aaPredicted RBP9.79□□□□□ -0.84
SMARCE1-206ENST00000447024 CAPN6Q9Y6Q1 641 aa9.79□□□□□ -0.84
SMARCE1-206ENST00000447024 PTPRCP08575 1304 aa9.79□□□□□ -0.84
SMARCE1-206ENST00000447024 ALDH1L1O75891 902 aa9.78□□□□□ -0.84
SMARCE1-206ENST00000447024 C1QTNF9P0C862 333 aa9.78□□□□□ -0.84
SMARCE1-206ENST00000447024 CTSWP56202 376 aa9.78□□□□□ -0.84
SMARCE1-206ENST00000447024 EIF6P56537 245 aaKnown RBP9.78□□□□□ -0.84
SMARCE1-206ENST00000447024 PTPN11Q06124 597 aaPredicted RBP9.78□□□□□ -0.84
SMARCE1-206ENST00000447024 GCKRQ14397 625 aa9.78□□□□□ -0.84
SMARCE1-206ENST00000447024 NKG7Q16617 165 aa9.78□□□□□ -0.84
SMARCE1-206ENST00000447024 DPP8Q6V1X1 898 aaPredicted RBP9.78□□□□□ -0.84
SMARCE1-206ENST00000447024 GPC2Q8N158 579 aa9.78□□□□□ -0.84
SMARCE1-206ENST00000447024 PLPPR2Q96GM1 343 aa9.78□□□□□ -0.84
SMARCE1-206ENST00000447024 PODXL2Q9NZ53 605 aa9.78□□□□□ -0.84
SMARCE1-206ENST00000447024 ST14Q9Y5Y6 855 aa9.78□□□□□ -0.84
SMARCE1-206ENST00000447024 LRRC37AA6NMS7 1700 aa9.77□□□□□ -0.85
SMARCE1-206ENST00000447024 TCERG1O14776 1098 aaKnown RBP9.77□□□□□ -0.85
SMARCE1-206ENST00000447024 MAPK8P45983 427 aa9.77□□□□□ -0.85
SMARCE1-206ENST00000447024 KIAA2012Q0VF49 1180 aa9.77□□□□□ -0.85
SMARCE1-206ENST00000447024 BEND3Q5T5X7 828 aa9.77□□□□□ -0.85
SMARCE1-206ENST00000447024 ANKRD18AQ8IVF6 992 aa9.77□□□□□ -0.85
SMARCE1-206ENST00000447024 NIM1KQ8IY84 436 aa9.77□□□□□ -0.85
SMARCE1-206ENST00000447024 FBXO15Q8NCQ5 510 aaPredicted RBP9.77□□□□□ -0.85
SMARCE1-206ENST00000447024 SMC1BQ8NDV3 1235 aa9.77□□□□□ -0.85
SMARCE1-206ENST00000447024 DIRC2Q96SL1 478 aa9.77□□□□□ -0.85
SMARCE1-206ENST00000447024 EYA3Q99504 573 aa9.77□□□□□ -0.85
SMARCE1-206ENST00000447024 MYH3P11055 1940 aa9.77□□□□□ -0.85
SMARCE1-206ENST00000447024 SCN4AP35499 1836 aa9.77□□□□□ -0.85
SMARCE1-206ENST00000447024 PPIP5K2O43314 1243 aa9.76□□□□□ -0.85
SMARCE1-206ENST00000447024 CSF1RP07333 972 aa9.76□□□□□ -0.85
SMARCE1-206ENST00000447024 HSPA6P17066 643 aa9.76□□□□□ -0.85
SMARCE1-206ENST00000447024 CWF19L2Q2TBE0 894 aaKnown RBP9.76□□□□□ -0.85
SMARCE1-206ENST00000447024 OLFM4Q6UX06 510 aa9.76□□□□□ -0.85
SMARCE1-206ENST00000447024 UBE3BQ7Z3V4 1068 aa9.76□□□□□ -0.85
SMARCE1-206ENST00000447024 MFSD2AQ8NA29 543 aa9.76□□□□□ -0.85
SMARCE1-206ENST00000447024 TTLL11Q8NHH1 800 aa9.76□□□□□ -0.85
SMARCE1-206ENST00000447024 CELF1Q92879 486 aaKnown RBP9.76□□□□□ -0.85
SMARCE1-206ENST00000447024 WNT10AQ9GZT5 417 aa9.76□□□□□ -0.85
SMARCE1-206ENST00000447024 NSUN3Q9H649 340 aaKnown RBP9.76□□□□□ -0.85
SMARCE1-206ENST00000447024 ZNRF3Q9ULT6 936 aa9.76□□□□□ -0.85
SMARCE1-206ENST00000447024 NFIBO00712 420 aa9.75□□□□□ -0.85
SMARCE1-206ENST00000447024 DDNO94850 711 aaPredicted RBP9.75□□□□□ -0.85
SMARCE1-206ENST00000447024 ZSCAN22P10073 491 aaPredicted RBP9.75□□□□□ -0.85
SMARCE1-206ENST00000447024 CAP2P40123 477 aa9.75□□□□□ -0.85
SMARCE1-206ENST00000447024 CASP7P55210 303 aa9.75□□□□□ -0.85
SMARCE1-206ENST00000447024 PDE4CQ08493 712 aa9.75□□□□□ -0.85
SMARCE1-206ENST00000447024 TNIP1Q15025 636 aa9.75□□□□□ -0.85
SMARCE1-206ENST00000447024 HDXQ7Z353 690 aa9.75□□□□□ -0.85
SMARCE1-206ENST00000447024 THAP5Q7Z6K1 395 aa9.75□□□□□ -0.85
SMARCE1-206ENST00000447024 PNMA8AQ86V59 439 aaPredicted RBP9.75□□□□□ -0.85
SMARCE1-206ENST00000447024 SIAH1Q8IUQ4 282 aa9.75□□□□□ -0.85
SMARCE1-206ENST00000447024 RIN3Q8TB24 985 aa9.75□□□□□ -0.85
SMARCE1-206ENST00000447024 GAL3ST3Q96A11 431 aa9.75□□□□□ -0.85
SMARCE1-206ENST00000447024 ALPK1Q96QP1 1244 aa9.75□□□□□ -0.85
SMARCE1-206ENST00000447024 KRTAP4-11Q9BYQ6 195 aa9.75□□□□□ -0.85
SMARCE1-206ENST00000447024 GRM8O00222 908 aa9.74□□□□□ -0.85
SMARCE1-206ENST00000447024 FMR1Q06787 632 aaKnown RBP eCLIP9.74□□□□□ -0.85
SMARCE1-206ENST00000447024 LETMD1Q6P1Q0 360 aa9.74□□□□□ -0.85
SMARCE1-206ENST00000447024 PDZRN4Q6ZMN7 1036 aaPredicted RBP9.74□□□□□ -0.85
SMARCE1-206ENST00000447024 SSH1Q8WYL5 1049 aa9.74□□□□□ -0.85
SMARCE1-206ENST00000447024 CCDC120Q96HB5 630 aa9.74□□□□□ -0.85
SMARCE1-206ENST00000447024 C9orf78Q9NZ63 289 aaPredicted RBP9.74□□□□□ -0.85
SMARCE1-206ENST00000447024 HACL1Q9UJ83 578 aa9.74□□□□□ -0.85
SMARCE1-206ENST00000447024 HDAC5Q9UQL6 1122 aa9.74□□□□□ -0.85
SMARCE1-206ENST00000447024 GNEQ9Y223 722 aaKnown RBP9.74□□□□□ -0.85
SMARCE1-206ENST00000447024 XDHP47989 1333 aa9.74□□□□□ -0.85
SMARCE1-206ENST00000447024 F6X3S4 739 aa9.73□□□□□ -0.85
SMARCE1-206ENST00000447024 RBAK-RBAKDNI3L0D1 243 aa9.73□□□□□ -0.85
SMARCE1-206ENST00000447024 GIPC1O14908 333 aa9.73□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms