RNA–Protein interactions for RNA: ENST00000446046.5

FN1-212, Transcript of fibronectin 1, humanhuman

TSL 1 (best) BASIC

Gene FN1, Length 7,952 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-212ENST00000446046 SLITRK6Q9H5Y7 841 aa12.72□□□□□ -0.37
FN1-212ENST00000446046 PALD1Q9ULE6 856 aa12.72□□□□□ -0.37
FN1-212ENST00000446046 SPATA31A6Q5VVP1 1343 aa12.72□□□□□ -0.37
FN1-212ENST00000446046 TULP4Q9NRJ4 1543 aa12.72□□□□□ -0.37
FN1-212ENST00000446046 SPON1Q9HCB6 807 aa12.72□□□□□ -0.37
FN1-212ENST00000446046 TAB2Q9NYJ8 693 aa12.72□□□□□ -0.37
FN1-212ENST00000446046 PAMP19021 973 aa12.72□□□□□ -0.37
FN1-212ENST00000446046 PHKA2P46019 1235 aa12.72□□□□□ -0.37
FN1-212ENST00000446046 LRMPQ12912 555 aa12.72□□□□□ -0.37
FN1-212ENST00000446046 TMEM106CQ9BVX2 250 aa12.72□□□□□ -0.37
FN1-212ENST00000446046 ZSWIM6Q9HCJ5 1215 aa12.72□□□□□ -0.37
FN1-212ENST00000446046 NARFQ9UHQ1 456 aa12.72□□□□□ -0.37
FN1-212ENST00000446046 ANGPTL3Q9Y5C1 460 aa12.72□□□□□ -0.37
FN1-212ENST00000446046 HPDP32754 393 aaPredicted RBP12.72□□□□□ -0.37
FN1-212ENST00000446046 ZMYM1Q5SVZ6 1142 aa12.72□□□□□ -0.37
FN1-212ENST00000446046 EFHBQ8N7U6 833 aa12.72□□□□□ -0.37
FN1-212ENST00000446046 CRB1P82279 1406 aa12.72□□□□□ -0.37
FN1-212ENST00000446046 ZNF131P52739 623 aa12.72□□□□□ -0.37
FN1-212ENST00000446046 TFAMQ00059 246 aaKnown RBP12.72□□□□□ -0.37
FN1-212ENST00000446046 hCG_1642624A0A1W2PR95 340 aa12.72□□□□□ -0.37
FN1-212ENST00000446046 FCER1AP12319 257 aa12.72□□□□□ -0.37
FN1-212ENST00000446046 CMA1P23946 247 aa12.72□□□□□ -0.37
FN1-212ENST00000446046 ADCY8P40145 1251 aa12.72□□□□□ -0.37
FN1-212ENST00000446046 RNASE9P60153 205 aaKnown RBP12.72□□□□□ -0.37
FN1-212ENST00000446046 ZBTB1Q9Y2K1 713 aa12.72□□□□□ -0.37
FN1-212ENST00000446046 KRIT1O00522 736 aa12.71□□□□□ -0.37
FN1-212ENST00000446046 FKBP3Q00688 224 aaKnown RBP12.71□□□□□ -0.37
FN1-212ENST00000446046 MAP3K20Q9NYL2 800 aaKnown RBP12.71□□□□□ -0.37
FN1-212ENST00000446046 HERC5Q9UII4 1024 aaKnown RBP12.71□□□□□ -0.37
FN1-212ENST00000446046 RGS16O15492 202 aaPredicted RBP12.71□□□□□ -0.37
FN1-212ENST00000446046 TSPY1Q01534 308 aa12.71□□□□□ -0.37
FN1-212ENST00000446046 AP3B2Q13367 1082 aa12.71□□□□□ -0.37
FN1-212ENST00000446046 TRIM42Q8IWZ5 723 aa12.71□□□□□ -0.37
FN1-212ENST00000446046 RAET1EQ8TD07 263 aa12.71□□□□□ -0.37
FN1-212ENST00000446046 PSPC1Q8WXF1 523 aaKnown RBP12.71□□□□□ -0.37
FN1-212ENST00000446046 ARHGEF2Q92974 986 aaKnown RBP12.71□□□□□ -0.37
FN1-212ENST00000446046 VPS37BQ9H9H4 285 aa12.71□□□□□ -0.37
FN1-212ENST00000446046 KIF28PB7ZC32 967 aa12.71□□□□□ -0.37
FN1-212ENST00000446046 IGSF3O75054 1194 aa12.71□□□□□ -0.37
FN1-212ENST00000446046 PPP6R2O75170 966 aa12.71□□□□□ -0.37
FN1-212ENST00000446046 ORC2Q13416 577 aaPredicted RBP12.71□□□□□ -0.37
FN1-212ENST00000446046 DRP2Q13474 957 aa12.71□□□□□ -0.37
FN1-212ENST00000446046 EPS15L1Q9UBC2 864 aa12.71□□□□□ -0.37
FN1-212ENST00000446046 SLF1Q9BQI6 1058 aa12.71□□□□□ -0.37
FN1-212ENST00000446046 FRMD4AQ9P2Q2 1039 aaPredicted RBP12.71□□□□□ -0.37
FN1-212ENST00000446046 COL15A1P39059 1388 aa12.71□□□□□ -0.37
FN1-212ENST00000446046 USP17L5A8MUK1 530 aa12.71□□□□□ -0.38
FN1-212ENST00000446046 C8orf34Q49A92 452 aa12.71□□□□□ -0.38
FN1-212ENST00000446046 DDX50Q9BQ39 737 aaKnown RBP12.71□□□□□ -0.38
FN1-212ENST00000446046 C2orf40Q9H1Z8 148 aa12.71□□□□□ -0.38
FN1-212ENST00000446046 RSPH14Q9UHP6 348 aa12.71□□□□□ -0.38
FN1-212ENST00000446046 MYH3P11055 1940 aa12.71□□□□□ -0.38
FN1-212ENST00000446046 H7C0C1 242 aa12.71□□□□□ -0.38
FN1-212ENST00000446046 ABCB4P21439 1286 aa12.71□□□□□ -0.38
FN1-212ENST00000446046 ATP5OP48047 213 aa12.71□□□□□ -0.38
FN1-212ENST00000446046 KLC3Q6P597 504 aa12.71□□□□□ -0.38
FN1-212ENST00000446046 GANCQ8TET4 914 aa12.71□□□□□ -0.38
FN1-212ENST00000446046 NRKQ7Z2Y5 1582 aa12.71□□□□□ -0.38
FN1-212ENST00000446046 PLA2R1Q13018 1463 aa12.71□□□□□ -0.38
FN1-212ENST00000446046 TTC36A6NLP5 189 aa12.71□□□□□ -0.38
FN1-212ENST00000446046 ATF2P15336 505 aa12.71□□□□□ -0.38
FN1-212ENST00000446046 EEF1GP26641 437 aaKnown RBP12.71□□□□□ -0.38
FN1-212ENST00000446046 NLRC4Q9NPP4 1024 aa12.71□□□□□ -0.38
FN1-212ENST00000446046 IQGAP1P46940 1657 aa12.71□□□□□ -0.38
FN1-212ENST00000446046 MYL3P08590 195 aa12.7□□□□□ -0.38
FN1-212ENST00000446046 RAPH1Q70E73 1250 aa12.7□□□□□ -0.38
FN1-212ENST00000446046 C7orf31Q8N865 590 aa12.7□□□□□ -0.38
FN1-212ENST00000446046 DHX38Q92620 1227 aaKnown RBP12.7□□□□□ -0.38
FN1-212ENST00000446046 RSRC1Q96IZ7 334 aaKnown RBP12.7□□□□□ -0.38
FN1-212ENST00000446046 NLRP4Q96MN2 994 aa12.7□□□□□ -0.38
FN1-212ENST00000446046 RNF40O75150 1001 aa12.7□□□□□ -0.38
FN1-212ENST00000446046 DSTYKQ6XUX3 929 aa12.7□□□□□ -0.38
FN1-212ENST00000446046 LRRIQ1Q96JM4 1722 aa12.7□□□□□ -0.38
FN1-212ENST00000446046 RBBP5Q15291 538 aaKnown RBP12.7□□□□□ -0.38
FN1-212ENST00000446046 GSDMAQ96QA5 445 aa12.7□□□□□ -0.38
FN1-212ENST00000446046 GON4LQ3T8J9 2241 aa12.7□□□□□ -0.38
FN1-212ENST00000446046 EIF3DO15371 548 aaKnown RBP eCLIP12.7□□□□□ -0.38
FN1-212ENST00000446046 TCP1P17987 556 aaKnown RBP12.7□□□□□ -0.38
FN1-212ENST00000446046 NR2F2P24468 414 aa12.7□□□□□ -0.38
FN1-212ENST00000446046 GPKOWQ92917 476 aaPredicted RBP eCLIP12.7□□□□□ -0.38
FN1-212ENST00000446046 BLZF1Q9H2G9 400 aa12.7□□□□□ -0.38
FN1-212ENST00000446046 PIDD1Q9HB75 910 aa12.7□□□□□ -0.38
FN1-212ENST00000446046 METP08581 1390 aa12.7□□□□□ -0.38
FN1-212ENST00000446046 KIF3CO14782 793 aa12.7□□□□□ -0.38
FN1-212ENST00000446046 AFPP02771 609 aaKnown RBP12.7□□□□□ -0.38
FN1-212ENST00000446046 PMLP29590 882 aa12.7□□□□□ -0.38
FN1-212ENST00000446046 LRRC24Q50LG9 513 aa12.7□□□□□ -0.38
FN1-212ENST00000446046 KATNAL1Q9BW62 490 aa12.7□□□□□ -0.38
FN1-212ENST00000446046 FRMPD1Q5SYB0 1578 aa12.7□□□□□ -0.38
FN1-212ENST00000446046 TSNAXIP1Q2TAA8 658 aa12.69□□□□□ -0.38
FN1-212ENST00000446046 CNPY4Q8N129 248 aa12.69□□□□□ -0.38
FN1-212ENST00000446046 MMP19Q99542 508 aa12.69□□□□□ -0.38
FN1-212ENST00000446046 C21orf2O43822 256 aa12.69□□□□□ -0.38
FN1-212ENST00000446046 INHBAP08476 426 aa12.69□□□□□ -0.38
FN1-212ENST00000446046 CPA1P15085 419 aa12.69□□□□□ -0.38
FN1-212ENST00000446046 ZNF75DP51815 510 aa12.69□□□□□ -0.38
FN1-212ENST00000446046 ANKRD12Q6UB98 2062 aa12.69□□□□□ -0.38
FN1-212ENST00000446046 SGK1O00141 431 aa12.69□□□□□ -0.38
FN1-212ENST00000446046 CYP4A11Q02928 519 aa12.69□□□□□ -0.38
FN1-212ENST00000446046 SREBF2Q12772 1141 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms