RNA–Protein interactions for RNA: ENST00000445667.6

USE1-202, Transcript of unconventional SNARE in the ER 1, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene USE1, Length 795 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-202ENST00000445667 SPATA33Q96N06 139 aa16.95■□□□□ 0.3
USE1-202ENST00000445667 INPP4AQ96PE3 977 aaPredicted RBP16.95■□□□□ 0.3
USE1-202ENST00000445667 HIPK3Q9H422 1215 aa16.95■□□□□ 0.3
USE1-202ENST00000445667 MLXIPQ9HAP2 919 aa16.95■□□□□ 0.3
USE1-202ENST00000445667 PCDHA6Q9UN73 950 aa16.95■□□□□ 0.3
USE1-202ENST00000445667 PCDHA8Q9Y5H6 950 aa16.95■□□□□ 0.3
USE1-202ENST00000445667 SPATA31C2B4DYI2 1134 aa16.94■□□□□ 0.3
USE1-202ENST00000445667 STAM2O75886 525 aa16.94■□□□□ 0.3
USE1-202ENST00000445667 CYP2C9P11712 490 aa16.94■□□□□ 0.3
USE1-202ENST00000445667 CSF2RAP15509 400 aa16.94■□□□□ 0.3
USE1-202ENST00000445667 PDIA3P30101 505 aaKnown RBP16.94■□□□□ 0.3
USE1-202ENST00000445667 ICAM3P32942 547 aa16.94■□□□□ 0.3
USE1-202ENST00000445667 CCT2P78371 535 aaKnown RBP16.94■□□□□ 0.3
USE1-202ENST00000445667 HSDL1Q3SXM5 330 aa16.94■□□□□ 0.3
USE1-202ENST00000445667 NFRKBQ6P4R8 1299 aa16.94■□□□□ 0.3
USE1-202ENST00000445667 TMEM199Q8N511 208 aa16.94■□□□□ 0.3
USE1-202ENST00000445667 NOC4LQ9BVI4 516 aaKnown RBP16.94■□□□□ 0.3
USE1-202ENST00000445667 TM6SF1Q9BZW5 370 aa16.94■□□□□ 0.3
USE1-202ENST00000445667 NCOA5Q9HCD5 579 aaKnown RBP16.94■□□□□ 0.3
USE1-202ENST00000445667 RIC8AQ9NPQ8 531 aa16.94■□□□□ 0.3
USE1-202ENST00000445667 BARHL2Q9NY43 387 aa16.94■□□□□ 0.3
USE1-202ENST00000445667 SMCO2A6NFE2 343 aa16.93■□□□□ 0.3
USE1-202ENST00000445667 SPDYE3A6NKU9 549 aa16.93■□□□□ 0.3
USE1-202ENST00000445667 FIBPO43427 364 aa16.93■□□□□ 0.3
USE1-202ENST00000445667 SUPT20HL2P0C7V6 817 aa16.93■□□□□ 0.3
USE1-202ENST00000445667 ZNF286BP0CG31 522 aa16.93■□□□□ 0.3
USE1-202ENST00000445667 ACRP10323 421 aa16.93■□□□□ 0.3
USE1-202ENST00000445667 CCL23P55773 120 aa16.93■□□□□ 0.3
USE1-202ENST00000445667 EVCP57679 992 aa16.93■□□□□ 0.3
USE1-202ENST00000445667 PFKFB3Q16875 520 aaPredicted RBP16.93■□□□□ 0.3
USE1-202ENST00000445667 XRRA1Q6P2D8 792 aa16.93■□□□□ 0.3
USE1-202ENST00000445667 C16orf59Q7L2K0 433 aa16.93■□□□□ 0.3
USE1-202ENST00000445667 PHKBQ93100 1093 aa16.93■□□□□ 0.3
USE1-202ENST00000445667 PGBD1Q96JS3 809 aa16.93■□□□□ 0.3
USE1-202ENST00000445667 ALG1Q9BT22 464 aa16.93■□□□□ 0.3
USE1-202ENST00000445667 LAMA3Q16787 3333 aa16.93■□□□□ 0.3
USE1-202ENST00000445667 MYH7BA7E2Y1 1941 aa16.92■□□□□ 0.3
USE1-202ENST00000445667 NID2Q14112 1375 aa16.92■□□□□ 0.3
USE1-202ENST00000445667 SCN10AQ9Y5Y9 1956 aa16.92■□□□□ 0.3
USE1-202ENST00000445667 hCG_1984214I3L0E3 225 aa16.92■□□□□ 0.3
USE1-202ENST00000445667 PPFIA4O75335 1185 aa16.92■□□□□ 0.3
USE1-202ENST00000445667 SCG2P13521 617 aa16.92■□□□□ 0.3
USE1-202ENST00000445667 PSEN2P49810 448 aa16.92■□□□□ 0.3
USE1-202ENST00000445667 ADCY7P51828 1080 aa16.92■□□□□ 0.3
USE1-202ENST00000445667 PPIGQ13427 754 aaKnown RBP eCLIP16.92■□□□□ 0.38e-6■■■■□ 22.7
USE1-202ENST00000445667 NTRK3Q16288 839 aa16.92■□□□□ 0.3
USE1-202ENST00000445667 PKN1Q16512 942 aa16.92■□□□□ 0.3
USE1-202ENST00000445667 PPP1R18Q6NYC8 613 aa16.92■□□□□ 0.3
USE1-202ENST00000445667 CYFIP1Q7L576 1253 aa16.92■□□□□ 0.3
USE1-202ENST00000445667 NLRX1Q86UT6 975 aa16.92■□□□□ 0.3
USE1-202ENST00000445667 ZNF713Q8N859 430 aaPredicted RBP16.92■□□□□ 0.3
USE1-202ENST00000445667 BUD13Q9BRD0 619 aaKnown RBP eCLIP16.92■□□□□ 0.3
USE1-202ENST00000445667 PDRG1Q9NUG6 133 aa16.92■□□□□ 0.3
USE1-202ENST00000445667 TMEM260Q9NX78 707 aa16.92■□□□□ 0.3
USE1-202ENST00000445667 TELO2Q9Y4R8 837 aa16.92■□□□□ 0.3
USE1-202ENST00000445667 SZT2Q5T011 3432 aa16.92■□□□□ 0.3
USE1-202ENST00000445667 PRPF3O43395 683 aaKnown RBP16.91■□□□□ 0.3
USE1-202ENST00000445667 HOXD8P13378 290 aaPredicted RBP16.91■□□□□ 0.3
USE1-202ENST00000445667 ITGB5P18084 799 aa16.91■□□□□ 0.3
USE1-202ENST00000445667 PTPN11Q06124 597 aaPredicted RBP16.91■□□□□ 0.3
USE1-202ENST00000445667 NEDD9Q14511 834 aa16.91■□□□□ 0.3
USE1-202ENST00000445667 MFSD10Q14728 455 aa16.91■□□□□ 0.3
USE1-202ENST00000445667 TMEM240Q5SV17 173 aa16.91■□□□□ 0.3
USE1-202ENST00000445667 GDF6Q6KF10 455 aaPredicted RBP16.91■□□□□ 0.3
USE1-202ENST00000445667 SCLYQ96I15 445 aa16.91■□□□□ 0.3
USE1-202ENST00000445667 RNPC3Q96LT9 517 aaKnown RBP16.91■□□□□ 0.3
USE1-202ENST00000445667 SLC26A6Q9BXS9 759 aa16.91■□□□□ 0.3
USE1-202ENST00000445667 WNT8AQ9H1J5 351 aa16.91■□□□□ 0.3
USE1-202ENST00000445667 HDAC6Q9UBN7 1215 aa16.91■□□□□ 0.3
USE1-202ENST00000445667 UBIAD1Q9Y5Z9 338 aa16.91■□□□□ 0.3
USE1-202ENST00000445667 HAS3O00219 553 aa16.9■□□□□ 0.3
USE1-202ENST00000445667 ADAMTS3O15072 1205 aa16.9■□□□□ 0.3
USE1-202ENST00000445667 ATP9AO75110 1047 aa16.9■□□□□ 0.3
USE1-202ENST00000445667 F2P00734 622 aa16.9■□□□□ 0.3
USE1-202ENST00000445667 AKAP17AQ02040 695 aaKnown RBP16.9■□□□□ 0.3
USE1-202ENST00000445667 SP4Q02446 784 aa16.9■□□□□ 0.3
USE1-202ENST00000445667 STK3Q13188 491 aa16.9■□□□□ 0.3
USE1-202ENST00000445667 PTGISQ16647 500 aa16.9■□□□□ 0.3
USE1-202ENST00000445667 KIAA0753Q2KHM9 967 aa16.9■□□□□ 0.3
USE1-202ENST00000445667 METTL7BQ6UX53 244 aa16.9■□□□□ 0.3
USE1-202ENST00000445667 ZNF365Q70YC5 407 aa16.9■□□□□ 0.3
USE1-202ENST00000445667 Q7L0L9 218 aa16.9■□□□□ 0.3
USE1-202ENST00000445667 GPRASP2Q96D09 838 aa16.9■□□□□ 0.3
USE1-202ENST00000445667 ANO3Q9BYT9 981 aa16.9■□□□□ 0.3
USE1-202ENST00000445667 EHMT1Q9H9B1 1298 aa16.9■□□□□ 0.3
USE1-202ENST00000445667 IL23AQ9NPF7 189 aa16.9■□□□□ 0.3
USE1-202ENST00000445667 PKD2L1Q9P0L9 805 aa16.9■□□□□ 0.3
USE1-202ENST00000445667 NOD1Q9Y239 953 aa16.9■□□□□ 0.3
USE1-202ENST00000445667 NOP56O00567 594 aaKnown RBP16.89■□□□□ 0.29
USE1-202ENST00000445667 SEC24BO95487 1268 aa16.89■□□□□ 0.29
USE1-202ENST00000445667 FOSP01100 380 aaPredicted RBP16.89■□□□□ 0.29
USE1-202ENST00000445667 IFNAR1P17181 557 aa16.89■□□□□ 0.29
USE1-202ENST00000445667 JAKMIP3Q5VZ66 844 aa16.89■□□□□ 0.29
USE1-202ENST00000445667 SESTD1Q86VW0 696 aa16.89■□□□□ 0.29
USE1-202ENST00000445667 C7orf31Q8N865 590 aa16.89■□□□□ 0.29
USE1-202ENST00000445667 CYP2W1Q8TAV3 490 aa16.89■□□□□ 0.29
USE1-202ENST00000445667 ZNF274Q96GC6 653 aaPredicted RBP16.89■□□□□ 0.29
USE1-202ENST00000445667 GPR20Q99678 358 aa16.89■□□□□ 0.29
USE1-202ENST00000445667 SENP7Q9BQF6 1050 aa16.89■□□□□ 0.29
USE1-202ENST00000445667 C16orf70Q9BSU1 422 aa16.89■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms