RNA–Protein interactions for RNA: ENST00000444621.1

HLA-F-221, Transcript of major histocompatibility complex, class I, F, humanhuman

Gene HLA-F, Length 495 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-F-221ENST00000444621 TMTC3Q6ZXV5 915 aa12.75□□□□□ -0.37
HLA-F-221ENST00000444621 HEATR3Q7Z4Q2 680 aa12.75□□□□□ -0.37
HLA-F-221ENST00000444621 RAB11FIP4Q86YS3 637 aa12.75□□□□□ -0.37
HLA-F-221ENST00000444621 MTG1Q9BT17 334 aaPredicted RBP12.75□□□□□ -0.37
HLA-F-221ENST00000444621 LRFN3Q9BTN0 628 aa12.75□□□□□ -0.37
HLA-F-221ENST00000444621 GLT8D2Q9H1C3 349 aa12.75□□□□□ -0.37
HLA-F-221ENST00000444621 PSTPIP2Q9H939 334 aa12.75□□□□□ -0.37
HLA-F-221ENST00000444621 HCN4Q9Y3Q4 1203 aa12.75□□□□□ -0.37
HLA-F-221ENST00000444621 ARIH1Q9Y4X5 557 aaPredicted RBP12.75□□□□□ -0.37
HLA-F-221ENST00000444621 DDX49Q9Y6V7 483 aaKnown RBP12.75□□□□□ -0.37
HLA-F-221ENST00000444621 LRRC37A2A6NM11 1700 aa12.74□□□□□ -0.37
HLA-F-221ENST00000444621 SPDYE3A6NKU9 549 aa12.74□□□□□ -0.37
HLA-F-221ENST00000444621 hCG_1984214I3L0E3 225 aa12.74□□□□□ -0.37
HLA-F-221ENST00000444621 SUPT20HL2P0C7V6 817 aa12.74□□□□□ -0.37
HLA-F-221ENST00000444621 RPS6KB1P23443 525 aa12.74□□□□□ -0.37
HLA-F-221ENST00000444621 PGM5Q15124 567 aa12.74□□□□□ -0.37
HLA-F-221ENST00000444621 XRRA1Q6P2D8 792 aa12.74□□□□□ -0.37
HLA-F-221ENST00000444621 PSRC1Q6PGN9 363 aaPredicted RBP12.74□□□□□ -0.37
HLA-F-221ENST00000444621 NLRX1Q86UT6 975 aa12.74□□□□□ -0.37
HLA-F-221ENST00000444621 VSIG10LQ86VR7 867 aa12.74□□□□□ -0.37
HLA-F-221ENST00000444621 TEX2Q8IWB9 1127 aa12.74□□□□□ -0.37
HLA-F-221ENST00000444621 DHX37Q8IY37 1157 aaKnown RBP12.74□□□□□ -0.37
HLA-F-221ENST00000444621 CMTR1Q8N1G2 835 aaKnown RBP12.74□□□□□ -0.37
HLA-F-221ENST00000444621 MICALL1Q8N3F8 863 aa12.74□□□□□ -0.37
HLA-F-221ENST00000444621 TMEM199Q8N511 208 aa12.74□□□□□ -0.37
HLA-F-221ENST00000444621 ZNF713Q8N859 430 aaPredicted RBP12.74□□□□□ -0.37
HLA-F-221ENST00000444621 CCDC12Q8WUD4 166 aaPredicted RBP12.74□□□□□ -0.37
HLA-F-221ENST00000444621 TCEANC2Q96MN5 208 aa12.74□□□□□ -0.37
HLA-F-221ENST00000444621 PDCD2LQ9BRP1 358 aa12.74□□□□□ -0.37
HLA-F-221ENST00000444621 USP26Q9BXU7 913 aa12.74□□□□□ -0.37
HLA-F-221ENST00000444621 PPP1R12CQ9BZL4 782 aa12.74□□□□□ -0.37
HLA-F-221ENST00000444621 COL20A1Q9P218 1284 aa12.74□□□□□ -0.37
HLA-F-221ENST00000444621 BAZ2BQ9UIF8 2168 aaKnown RBP12.73□□□□□ -0.37
HLA-F-221ENST00000444621 KIAA1217Q5T5P2 1943 aa12.73□□□□□ -0.37
HLA-F-221ENST00000444621 PIK3CDO00329 1044 aa12.73□□□□□ -0.37
HLA-F-221ENST00000444621 CDK7P50613 346 aa12.73□□□□□ -0.37
HLA-F-221ENST00000444621 KCNQ1P51787 676 aa12.73□□□□□ -0.37
HLA-F-221ENST00000444621 NAPAP54920 295 aa12.73□□□□□ -0.37
HLA-F-221ENST00000444621 IRX5P78411 483 aaPredicted RBP12.73□□□□□ -0.37
HLA-F-221ENST00000444621 APOBRQ0VD83 1088 aa12.73□□□□□ -0.37
HLA-F-221ENST00000444621 DGKDQ16760 1214 aa12.73□□□□□ -0.37
HLA-F-221ENST00000444621 LY6KQ17RY6 165 aa12.73□□□□□ -0.37
HLA-F-221ENST00000444621 RUFY3Q7L099 469 aa12.73□□□□□ -0.37
HLA-F-221ENST00000444621 BRF1Q92994 677 aa12.73□□□□□ -0.37
HLA-F-221ENST00000444621 EPHX3Q9H6B9 360 aa12.73□□□□□ -0.37
HLA-F-221ENST00000444621 MLXIPQ9HAP2 919 aa12.73□□□□□ -0.37
HLA-F-221ENST00000444621 SLC28A3Q9HAS3 691 aa12.73□□□□□ -0.37
HLA-F-221ENST00000444621 DDX41Q9UJV9 622 aaKnown RBP12.73□□□□□ -0.37
HLA-F-221ENST00000444621 YBX2Q9Y2T7 364 aaKnown RBP12.73□□□□□ -0.37
HLA-F-221ENST00000444621 V9GY48 417 aaPredicted RBP12.73□□□□□ -0.37
HLA-F-221ENST00000444621 A6NJR5 290 aa12.72□□□□□ -0.37
HLA-F-221ENST00000444621 OPLAHO14841 1288 aa12.72□□□□□ -0.37
HLA-F-221ENST00000444621 CTAGE5O15320 804 aa12.72□□□□□ -0.37
HLA-F-221ENST00000444621 CYP2C18P33260 490 aa12.72□□□□□ -0.37
HLA-F-221ENST00000444621 CHMP4BP1P59074 171 aa12.72□□□□□ -0.37
HLA-F-221ENST00000444621 FAM47CQ5HY64 1035 aa12.72□□□□□ -0.37
HLA-F-221ENST00000444621 PPP1R18Q6NYC8 613 aa12.72□□□□□ -0.37
HLA-F-221ENST00000444621 CPLX2Q6PUV4 134 aaKnown RBP12.72□□□□□ -0.37
HLA-F-221ENST00000444621 FBXL16Q8N461 479 aa12.72□□□□□ -0.37
HLA-F-221ENST00000444621 GIMAP8Q8ND71 665 aaPredicted RBP12.72□□□□□ -0.37
HLA-F-221ENST00000444621 HERVK_113Q902F9 699 aa12.72□□□□□ -0.37
HLA-F-221ENST00000444621 CDHR1Q96JP9 859 aa12.72□□□□□ -0.37
HLA-F-221ENST00000444621 KATNAL1Q9BW62 490 aa12.72□□□□□ -0.37
HLA-F-221ENST00000444621 TM6SF1Q9BZW5 370 aa12.72□□□□□ -0.37
HLA-F-221ENST00000444621 IL23AQ9NPF7 189 aa12.72□□□□□ -0.37
HLA-F-221ENST00000444621 BRPF3Q9ULD4 1205 aa12.72□□□□□ -0.37
HLA-F-221ENST00000444621 NOD1Q9Y239 953 aa12.72□□□□□ -0.37
HLA-F-221ENST00000444621 FOSP01100 380 aaPredicted RBP12.71□□□□□ -0.37
HLA-F-221ENST00000444621 CPA1P15085 419 aa12.71□□□□□ -0.37
HLA-F-221ENST00000444621 PURAQ00577 322 aaKnown RBP12.71□□□□□ -0.37
HLA-F-221ENST00000444621 PTPN11Q06124 597 aaPredicted RBP12.71□□□□□ -0.37
HLA-F-221ENST00000444621 NEDD9Q14511 834 aa12.71□□□□□ -0.37
HLA-F-221ENST00000444621 AAK1Q2M2I8 961 aa12.71□□□□□ -0.37
HLA-F-221ENST00000444621 SLC35G1Q2M3R5 365 aa12.71□□□□□ -0.37
HLA-F-221ENST00000444621 MCTP2Q6DN12 878 aa12.71□□□□□ -0.37
HLA-F-221ENST00000444621 CCDC62Q6P9F0 684 aa12.71□□□□□ -0.37
HLA-F-221ENST00000444621 USP17L6PQ6QN14 398 aa12.71□□□□□ -0.37
HLA-F-221ENST00000444621 AFG1LQ8WV93 481 aa12.71□□□□□ -0.37
HLA-F-221ENST00000444621 COPS5Q92905 334 aa12.71□□□□□ -0.37
HLA-F-221ENST00000444621 ZSWIM6Q9HCJ5 1215 aa12.71□□□□□ -0.37
HLA-F-221ENST00000444621 TRANK1O15050 2925 aa12.7□□□□□ -0.38
HLA-F-221ENST00000444621 hCG_1642624A0A1W2PR95 340 aa12.7□□□□□ -0.38
HLA-F-221ENST00000444621 SMCO2A6NFE2 343 aa12.7□□□□□ -0.38
HLA-F-221ENST00000444621 NOP56O00567 594 aaKnown RBP12.7□□□□□ -0.38
HLA-F-221ENST00000444621 CPLX1O14810 134 aa12.7□□□□□ -0.38
HLA-F-221ENST00000444621 PPFIA4O75335 1185 aa12.7□□□□□ -0.38
HLA-F-221ENST00000444621 FGBP02675 491 aa12.7□□□□□ -0.38
HLA-F-221ENST00000444621 ADCY7P51828 1080 aa12.7□□□□□ -0.38
HLA-F-221ENST00000444621 RABGGTBP53611 331 aa12.7□□□□□ -0.38
HLA-F-221ENST00000444621 PSMC6P62333 389 aa12.7□□□□□ -0.38
HLA-F-221ENST00000444621 SKIV2LQ15477 1246 aaKnown RBP12.7□□□□□ -0.38
HLA-F-221ENST00000444621 TMEM31Q5JXX7 168 aa12.7□□□□□ -0.38
HLA-F-221ENST00000444621 TMEM63BQ5T3F8 832 aa12.7□□□□□ -0.38
HLA-F-221ENST00000444621 PCNX4Q63HM2 1172 aa12.7□□□□□ -0.38
HLA-F-221ENST00000444621 NFRKBQ6P4R8 1299 aa12.7□□□□□ -0.38
HLA-F-221ENST00000444621 FAM126BQ8IXS8 530 aa12.7□□□□□ -0.38
HLA-F-221ENST00000444621 TRIM22Q8IYM9 498 aa12.7□□□□□ -0.38
HLA-F-221ENST00000444621 SLC43A3Q8NBI5 491 aa12.7□□□□□ -0.38
HLA-F-221ENST00000444621 EMID1Q96A84 441 aaPredicted RBP12.7□□□□□ -0.38
HLA-F-221ENST00000444621 SPATA33Q96N06 139 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms