RNA–Protein interactions for RNA: ENST00000444532.2

CCDC188-202, Transcript of coiled-coil domain containing 188, humanhuman

TSL 3

Gene CCDC188, Length 628 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC188-202ENST00000444532 FXR1P51114 621 aaKnown RBP eCLIP21.37■■□□□ 1.01
CCDC188-202ENST00000444532 ADCY7P51828 1080 aa21.37■■□□□ 1.01
CCDC188-202ENST00000444532 AKAP17AQ02040 695 aaKnown RBP21.37■■□□□ 1.01
CCDC188-202ENST00000444532 SP2Q02086 613 aa21.37■■□□□ 1.01
CCDC188-202ENST00000444532 IL17RAQ96F46 866 aa21.37■■□□□ 1.01
CCDC188-202ENST00000444532 ALDH8A1Q9H2A2 487 aaPredicted RBP21.37■■□□□ 1.01
CCDC188-202ENST00000444532 RTEL1Q9NZ71 1219 aa21.37■■□□□ 1.01
CCDC188-202ENST00000444532 RANBP2P49792 3224 aaKnown RBP21.36■■□□□ 1.01
CCDC188-202ENST00000444532 FIBPO43427 364 aa21.36■■□□□ 1.01
CCDC188-202ENST00000444532 GGPS1O95749 300 aa21.36■■□□□ 1.01
CCDC188-202ENST00000444532 UBA1P22314 1058 aaKnown RBP21.36■■□□□ 1.01
CCDC188-202ENST00000444532 ITGB8P26012 769 aa21.36■■□□□ 1.01
CCDC188-202ENST00000444532 CCT2P78371 535 aaKnown RBP21.36■■□□□ 1.01
CCDC188-202ENST00000444532 NBPF20Q3BBV1 942 aa21.36■■□□□ 1.01
CCDC188-202ENST00000444532 NFRKBQ6P4R8 1299 aa21.36■■□□□ 1.01
CCDC188-202ENST00000444532 NLRX1Q86UT6 975 aa21.36■■□□□ 1.01
CCDC188-202ENST00000444532 RNF26Q9BY78 433 aaPredicted RBP21.36■■□□□ 1.01
CCDC188-202ENST00000444532 PPFIA4O75335 1185 aa21.35■■□□□ 1.01
CCDC188-202ENST00000444532 SUPT20HL2P0C7V6 817 aa21.35■■□□□ 1.01
CCDC188-202ENST00000444532 PTPN11Q06124 597 aaPredicted RBP21.35■■□□□ 1.01
CCDC188-202ENST00000444532 NEDD9Q14511 834 aa21.35■■□□□ 1.01
CCDC188-202ENST00000444532 PKN1Q16512 942 aa21.35■■□□□ 1.01
CCDC188-202ENST00000444532 CCDC12Q8WUD4 166 aaPredicted RBP21.35■■□□□ 1.01
CCDC188-202ENST00000444532 PHKBQ93100 1093 aa21.35■■□□□ 1.01
CCDC188-202ENST00000444532 SPATA33Q96N06 139 aa21.35■■□□□ 1.01
CCDC188-202ENST00000444532 MLXIPQ9HAP2 919 aa21.35■■□□□ 1.01
CCDC188-202ENST00000444532 NCOA5Q9HCD5 579 aaKnown RBP21.35■■□□□ 1.01
CCDC188-202ENST00000444532 ESYT2A0FGR8 921 aa21.34■■□□□ 1.01
CCDC188-202ENST00000444532 B4GALT4O60513 344 aa21.34■■□□□ 1.01
CCDC188-202ENST00000444532 HOXD8P13378 290 aaPredicted RBP21.34■■□□□ 1.01
CCDC188-202ENST00000444532 GPRASP2Q96D09 838 aa21.34■■□□□ 1.01
CCDC188-202ENST00000444532 CDHR1Q96JP9 859 aa21.34■■□□□ 1.01
CCDC188-202ENST00000444532 SENP7Q9BQF6 1050 aa21.34■■□□□ 1.01
CCDC188-202ENST00000444532 TRPV6Q9H1D0 765 aa21.34■■□□□ 1.01
CCDC188-202ENST00000444532 SEC24BO95487 1268 aa21.33■■□□□ 1.01
CCDC188-202ENST00000444532 CLK2P49760 499 aaKnown RBP21.33■■□□□ 1.01
CCDC188-202ENST00000444532 SEMA3FQ13275 785 aa21.33■■□□□ 1.01
CCDC188-202ENST00000444532 AP3B2Q13367 1082 aa21.33■■□□□ 1.01
CCDC188-202ENST00000444532 ANKRD1Q15327 319 aa21.33■■□□□ 1.01
CCDC188-202ENST00000444532 HSDL1Q3SXM5 330 aa21.33■■□□□ 1.01
CCDC188-202ENST00000444532 LRIT3Q3SXY7 679 aa21.33■■□□□ 1.01
CCDC188-202ENST00000444532 MCTP2Q6DN12 878 aa21.33■■□□□ 1.01
CCDC188-202ENST00000444532 MFSD5Q6N075 450 aa21.33■■□□□ 1.01
CCDC188-202ENST00000444532 GIMAP8Q8ND71 665 aaPredicted RBP21.33■■□□□ 1.01
CCDC188-202ENST00000444532 LARP6Q9BRS8 491 aaKnown RBP21.33■■□□□ 1.01
CCDC188-202ENST00000444532 KATNAL1Q9BW62 490 aa21.33■■□□□ 1.01
CCDC188-202ENST00000444532 SLC26A6Q9BXS9 759 aa21.33■■□□□ 1.01
CCDC188-202ENST00000444532 ZMYND12Q9H0C1 365 aa21.33■■□□□ 1.01
CCDC188-202ENST00000444532 UBIAD1Q9Y5Z9 338 aa21.33■■□□□ 1.01
CCDC188-202ENST00000444532 CPLX1O14810 134 aa21.32■■□□□ 1
CCDC188-202ENST00000444532 MAFGO15525 162 aa21.32■■□□□ 1
CCDC188-202ENST00000444532 FPGSQ05932 587 aa21.32■■□□□ 1
CCDC188-202ENST00000444532 SSRP1Q08945 709 aaKnown RBP21.32■■□□□ 1
CCDC188-202ENST00000444532 FAM47CQ5HY64 1035 aa21.32■■□□□ 1
CCDC188-202ENST00000444532 CPLX2Q6PUV4 134 aaKnown RBP21.32■■□□□ 1
CCDC188-202ENST00000444532 METTL7BQ6UX53 244 aa21.32■■□□□ 1
CCDC188-202ENST00000444532 TRIM22Q8IYM9 498 aa21.32■■□□□ 1
CCDC188-202ENST00000444532 KAT2BQ92831 832 aa21.32■■□□□ 1
CCDC188-202ENST00000444532 C6orf50Q9HD87 102 aa21.32■■□□□ 1
CCDC188-202ENST00000444532 SORBS3O60504 671 aa21.31■■□□□ 1
CCDC188-202ENST00000444532 ITGB5P18084 799 aa21.31■■□□□ 1
CCDC188-202ENST00000444532 GNA11P29992 359 aa21.31■■□□□ 1
CCDC188-202ENST00000444532 CYFIP1Q7L576 1253 aa21.31■■□□□ 1
CCDC188-202ENST00000444532 SESTD1Q86VW0 696 aa21.31■■□□□ 1
CCDC188-202ENST00000444532 TMEM199Q8N511 208 aa21.31■■□□□ 1
CCDC188-202ENST00000444532 ANO3Q9BYT9 981 aa21.31■■□□□ 1
CCDC188-202ENST00000444532 HIPK3Q9H422 1215 aa21.31■■□□□ 1
CCDC188-202ENST00000444532 JADE2Q9NQC1 790 aa21.31■■□□□ 1
CCDC188-202ENST00000444532 SH3GLB2Q9NR46 395 aa21.31■■□□□ 1
CCDC188-202ENST00000444532 NOP56O00567 594 aaKnown RBP21.3■■□□□ 1
CCDC188-202ENST00000444532 F2P00734 622 aa21.3■■□□□ 1
CCDC188-202ENST00000444532 CHMP4BP1P59074 171 aa21.3■■□□□ 1
CCDC188-202ENST00000444532 STK3Q13188 491 aa21.3■■□□□ 1
CCDC188-202ENST00000444532 MTMR1Q13613 665 aa21.3■■□□□ 1
CCDC188-202ENST00000444532 CCDC148Q8NFR7 591 aa21.3■■□□□ 1
CCDC188-202ENST00000444532 BICD2Q8TD16 824 aa21.3■■□□□ 1
CCDC188-202ENST00000444532 PPP1R12CQ9BZL4 782 aa21.3■■□□□ 1
CCDC188-202ENST00000444532 BCAS3Q9H6U6 928 aa21.3■■□□□ 1
CCDC188-202ENST00000444532 TRMT13Q9NUP7 481 aaKnown RBP21.3■■□□□ 1
CCDC188-202ENST00000444532 DOCK5Q9H7D0 1870 aa21.3■■□□□ 1
CCDC188-202ENST00000444532 HAS3O00219 553 aa21.29■■□□□ 1
CCDC188-202ENST00000444532 SREBF1P36956 1147 aa21.29■■□□□ 1
CCDC188-202ENST00000444532 PSEN2P49810 448 aa21.29■■□□□ 1
CCDC188-202ENST00000444532 PPIGQ13427 754 aaKnown RBP eCLIP21.29■■□□□ 1
CCDC188-202ENST00000444532 SHHQ15465 462 aa21.29■■□□□ 1
CCDC188-202ENST00000444532 MXRA8Q9BRK3 442 aa21.29■■□□□ 1
CCDC188-202ENST00000444532 NOC4LQ9BVI4 516 aaKnown RBP21.29■■□□□ 1
CCDC188-202ENST00000444532 SLKQ9H2G2 1235 aaPredicted RBP21.29■■□□□ 1
CCDC188-202ENST00000444532 TMEM260Q9NX78 707 aa21.29■■□□□ 1
CCDC188-202ENST00000444532 PPFIA3O75145 1194 aa21.28■■□□□ 1
CCDC188-202ENST00000444532 DEXIO95424 95 aa21.28■■□□□ 1
CCDC188-202ENST00000444532 SLC34A2O95436 690 aa21.28■■□□□ 1
CCDC188-202ENST00000444532 ZNF286BP0CG31 522 aa21.28■■□□□ 1
CCDC188-202ENST00000444532 CYP2C18P33260 490 aa21.28■■□□□ 1
CCDC188-202ENST00000444532 MFSD10Q14728 455 aa21.28■■□□□ 1
CCDC188-202ENST00000444532 KIAA0753Q2KHM9 967 aa21.28■■□□□ 1
CCDC188-202ENST00000444532 REXO1Q8N1G1 1221 aaKnown RBP21.28■■□□□ 1
CCDC188-202ENST00000444532 C7orf31Q8N865 590 aa21.28■■□□□ 1
CCDC188-202ENST00000444532 PGBD1Q96JS3 809 aa21.28■■□□□ 1
CCDC188-202ENST00000444532 GPR20Q99678 358 aa21.28■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms