RNA–Protein interactions for RNA: ENST00000444476.1

LINC00475-208, long intergenic non-protein coding RNA 475, humanhuman

TSL 3

Gene LINC00475, Length 456 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00475-208ENST00000444476 CCDC96Q2M329 555 aa12.9□□□□□ -0.34
LINC00475-208ENST00000444476 IFIT1BQ5T764 474 aaKnown RBP12.9□□□□□ -0.34
LINC00475-208ENST00000444476 WDR78Q5VTH9 848 aa12.9□□□□□ -0.34
LINC00475-208ENST00000444476 BTNL9Q6UXG8 535 aa12.9□□□□□ -0.34
LINC00475-208ENST00000444476 ENAHQ8N8S7 591 aaPredicted RBP12.9□□□□□ -0.34
LINC00475-208ENST00000444476 REPS2Q8NFH8 660 aa12.9□□□□□ -0.34
LINC00475-208ENST00000444476 USP6NLQ92738 828 aa12.9□□□□□ -0.34
LINC00475-208ENST00000444476 FBXO40Q9UH90 709 aa12.9□□□□□ -0.34
LINC00475-208ENST00000444476 PHF24Q9UPV7 400 aa12.9□□□□□ -0.34
LINC00475-208ENST00000444476 PCDHB11Q9Y5F2 797 aa12.9□□□□□ -0.34
LINC00475-208ENST00000444476 COL11A1P12107 1806 aaPredicted RBP12.9□□□□□ -0.34
LINC00475-208ENST00000444476 ADAM23O75077 832 aa12.89□□□□□ -0.35
LINC00475-208ENST00000444476 HMGCRP04035 888 aa12.89□□□□□ -0.35
LINC00475-208ENST00000444476 FCER1AP12319 257 aa12.89□□□□□ -0.35
LINC00475-208ENST00000444476 ZNF543Q08ER8 600 aa12.89□□□□□ -0.35
LINC00475-208ENST00000444476 KRT32Q14532 448 aa12.89□□□□□ -0.35
LINC00475-208ENST00000444476 TKFCQ3LXA3 575 aa12.89□□□□□ -0.35
LINC00475-208ENST00000444476 ASPRV1Q53RT3 343 aa12.89□□□□□ -0.35
LINC00475-208ENST00000444476 CREB3L3Q68CJ9 461 aa12.89□□□□□ -0.35
LINC00475-208ENST00000444476 NCAPG2Q86XI2 1143 aa12.89□□□□□ -0.35
LINC00475-208ENST00000444476 ZKSCAN3Q9BRR0 538 aa12.89□□□□□ -0.35
LINC00475-208ENST00000444476 OXCT2Q9BYC2 517 aaPredicted RBP12.89□□□□□ -0.35
LINC00475-208ENST00000444476 BIN2Q9UBW5 565 aaPredicted RBP12.89□□□□□ -0.35
LINC00475-208ENST00000444476 RBBP6Q7Z6E9 1792 aaKnown RBP12.89□□□□□ -0.35
LINC00475-208ENST00000444476 PLXNB2O15031 1838 aa12.88□□□□□ -0.35
LINC00475-208ENST00000444476 CENPFP49454 3210 aa12.88□□□□□ -0.35
LINC00475-208ENST00000444476 SLC27A2O14975 620 aa12.88□□□□□ -0.35
LINC00475-208ENST00000444476 TRAK2O60296 914 aa12.88□□□□□ -0.35
LINC00475-208ENST00000444476 MCM5P33992 734 aa12.88□□□□□ -0.35
LINC00475-208ENST00000444476 KCTD2Q14681 263 aa12.88□□□□□ -0.35
LINC00475-208ENST00000444476 SEC23AQ15436 765 aa12.88□□□□□ -0.35
LINC00475-208ENST00000444476 TSGA10IPQ3SY00 556 aa12.88□□□□□ -0.35
LINC00475-208ENST00000444476 SNRNP48Q6IEG0 339 aaKnown RBP12.88□□□□□ -0.35
LINC00475-208ENST00000444476 KCTD1Q719H9 257 aa12.88□□□□□ -0.35
LINC00475-208ENST00000444476 ALYREFQ86V81 257 aaKnown RBP12.88□□□□□ -0.35
LINC00475-208ENST00000444476 TMTC2Q8N394 836 aa12.88□□□□□ -0.35
LINC00475-208ENST00000444476 CHST13Q8NET6 341 aa12.88□□□□□ -0.35
LINC00475-208ENST00000444476 SH3TC2Q8TF17 1288 aa12.88□□□□□ -0.35
LINC00475-208ENST00000444476 TMEM87BQ96K49 555 aa12.88□□□□□ -0.35
LINC00475-208ENST00000444476 WDR19Q8NEZ3 1342 aa12.88□□□□□ -0.35
LINC00475-208ENST00000444476 IFIT3O14879 490 aaKnown RBP12.87□□□□□ -0.35
LINC00475-208ENST00000444476 PEX10O60683 326 aa12.87□□□□□ -0.35
LINC00475-208ENST00000444476 HMGB1P09429 215 aaKnown RBP12.87□□□□□ -0.35
LINC00475-208ENST00000444476 CYP2B6P20813 491 aa12.87□□□□□ -0.35
LINC00475-208ENST00000444476 ADORA2AP29274 412 aa12.87□□□□□ -0.35
LINC00475-208ENST00000444476 RGS19P49795 217 aa12.87□□□□□ -0.35
LINC00475-208ENST00000444476 WTAPQ15007 396 aa12.87□□□□□ -0.35
LINC00475-208ENST00000444476 SYDE2Q5VT97 1194 aa12.87□□□□□ -0.35
LINC00475-208ENST00000444476 CYB5R4Q7L1T6 521 aa12.87□□□□□ -0.35
LINC00475-208ENST00000444476 DPP9Q86TI2 863 aa12.87□□□□□ -0.35
LINC00475-208ENST00000444476 MB21D2Q8IYB1 491 aaPredicted RBP12.87□□□□□ -0.35
LINC00475-208ENST00000444476 MMP19Q99542 508 aa12.87□□□□□ -0.35
LINC00475-208ENST00000444476 PRR12Q9ULL5 1215 aa12.87□□□□□ -0.35
LINC00475-208ENST00000444476 DIS3Q9Y2L1 958 aaKnown RBP12.87□□□□□ -0.35
LINC00475-208ENST00000444476 INHAP05111 366 aa12.86□□□□□ -0.35
LINC00475-208ENST00000444476 PARP1P09874 1014 aaKnown RBP12.86□□□□□ -0.35
LINC00475-208ENST00000444476 ELNP15502 786 aa12.86□□□□□ -0.35
LINC00475-208ENST00000444476 SCTRP47872 440 aa12.86□□□□□ -0.35
LINC00475-208ENST00000444476 MFSD14CQ5VZR4 134 aa12.86□□□□□ -0.35
LINC00475-208ENST00000444476 OLFML2BQ68BL8 750 aa12.86□□□□□ -0.35
LINC00475-208ENST00000444476 STOX1Q6ZVD7 989 aa12.86□□□□□ -0.35
LINC00475-208ENST00000444476 CPXCR1Q8N123 301 aa12.86□□□□□ -0.35
LINC00475-208ENST00000444476 MAF1Q9H063 256 aa12.86□□□□□ -0.35
LINC00475-208ENST00000444476 RANBP17Q9H2T7 1088 aaKnown RBP12.86□□□□□ -0.35
LINC00475-208ENST00000444476 MTMR7Q9Y216 660 aa12.86□□□□□ -0.35
LINC00475-208ENST00000444476 ICAM1P05362 532 aa12.85□□□□□ -0.35
LINC00475-208ENST00000444476 GJB1P08034 283 aa12.85□□□□□ -0.35
LINC00475-208ENST00000444476 LIFRP42702 1097 aa12.85□□□□□ -0.35
LINC00475-208ENST00000444476 LBRQ14739 615 aaKnown RBP12.85□□□□□ -0.35
LINC00475-208ENST00000444476 TMEM67Q5HYA8 995 aa12.85□□□□□ -0.35
LINC00475-208ENST00000444476 CATIPQ7Z7H3 387 aa12.85□□□□□ -0.35
LINC00475-208ENST00000444476 MSL3Q8N5Y2 521 aaKnown RBP12.85□□□□□ -0.35
LINC00475-208ENST00000444476 TRIB2Q92519 343 aa12.85□□□□□ -0.35
LINC00475-208ENST00000444476 MAP3K14Q99558 947 aa12.85□□□□□ -0.35
LINC00475-208ENST00000444476 ACAD9Q9H845 621 aa12.85□□□□□ -0.35
LINC00475-208ENST00000444476 RAVER2Q9HCJ3 691 aaKnown RBP12.85□□□□□ -0.35
LINC00475-208ENST00000444476 MKL2Q9ULH7 1088 aa12.85□□□□□ -0.35
LINC00475-208ENST00000444476 PFASO15067 1338 aa12.85□□□□□ -0.35
LINC00475-208ENST00000444476 FRMPD2Q68DX3 1309 aaPredicted RBP12.85□□□□□ -0.35
LINC00475-208ENST00000444476 RPTORQ8N122 1335 aa12.85□□□□□ -0.35
LINC00475-208ENST00000444476 ZNFX1Q9P2E3 1918 aaKnown RBP12.84□□□□□ -0.35
LINC00475-208ENST00000444476 A0A1B0GTH6 734 aa12.84□□□□□ -0.35
LINC00475-208ENST00000444476 PRC1O43663 620 aa12.84□□□□□ -0.35
LINC00475-208ENST00000444476 DDAH1O94760 285 aa12.84□□□□□ -0.35
LINC00475-208ENST00000444476 CCL5P13501 91 aa12.84□□□□□ -0.35
LINC00475-208ENST00000444476 HSPA4P34932 840 aa12.84□□□□□ -0.35
LINC00475-208ENST00000444476 TRAF1Q13077 416 aa12.84□□□□□ -0.35
LINC00475-208ENST00000444476 MAP3K21Q5TCX8 1036 aa12.84□□□□□ -0.35
LINC00475-208ENST00000444476 IGDCC4Q8TDY8 1250 aa12.84□□□□□ -0.35
LINC00475-208ENST00000444476 KCNB2Q92953 911 aa12.84□□□□□ -0.35
LINC00475-208ENST00000444476 DDX11Q96FC9 970 aa12.84□□□□□ -0.35
LINC00475-208ENST00000444476 NEK1Q96PY6 1258 aa12.84□□□□□ -0.35
LINC00475-208ENST00000444476 RNF208Q9H0X6 261 aa12.84□□□□□ -0.35
LINC00475-208ENST00000444476 NRBP1Q9UHY1 535 aa12.84□□□□□ -0.35
LINC00475-208ENST00000444476 GDF2Q9UK05 429 aaPredicted RBP12.84□□□□□ -0.35
LINC00475-208ENST00000444476 CCPG1Q9ULG6 757 aa12.84□□□□□ -0.35
LINC00475-208ENST00000444476 TAF6LQ9Y6J9 622 aa12.84□□□□□ -0.35
LINC00475-208ENST00000444476 MSCO60682 206 aa12.83□□□□□ -0.36
LINC00475-208ENST00000444476 MYCP01106 439 aaPredicted RBP12.83□□□□□ -0.36
LINC00475-208ENST00000444476 PROCP04070 461 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms