RNA–Protein interactions for RNA: ENST00000443727.1

LRCH3-208, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 4

Gene LRCH3, Length 611 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-208ENST00000443727 CPA1P15085 419 aa23.09■■□□□ 1.29
LRCH3-208ENST00000443727 PSEN2P49810 448 aa23.09■■□□□ 1.29
LRCH3-208ENST00000443727 MRPS9P82933 396 aaKnown RBP23.09■■□□□ 1.29
LRCH3-208ENST00000443727 SP2Q02086 613 aa23.09■■□□□ 1.29
LRCH3-208ENST00000443727 PTGISQ16647 500 aa23.09■■□□□ 1.29
LRCH3-208ENST00000443727 XRRA1Q6P2D8 792 aa23.09■■□□□ 1.29
LRCH3-208ENST00000443727 BLOC1S2Q6QNY1 142 aa23.09■■□□□ 1.29
LRCH3-208ENST00000443727 KAT2BQ92831 832 aa23.09■■□□□ 1.29
LRCH3-208ENST00000443727 GPKOWQ92917 476 aaPredicted RBP eCLIP23.09■■□□□ 1.29
LRCH3-208ENST00000443727 SCLYQ96I15 445 aa23.09■■□□□ 1.29
LRCH3-208ENST00000443727 ALG1Q9BT22 464 aa23.09■■□□□ 1.29
LRCH3-208ENST00000443727 SPDYE3A6NKU9 549 aa23.08■■□□□ 1.29
LRCH3-208ENST00000443727 NOP56O00567 594 aaKnown RBP23.08■■□□□ 1.29
LRCH3-208ENST00000443727 BFSP2Q13515 415 aa23.08■■□□□ 1.29
LRCH3-208ENST00000443727 PCNX4Q63HM2 1172 aa23.08■■□□□ 1.29
LRCH3-208ENST00000443727 KCNB2Q92953 911 aa23.08■■□□□ 1.29
LRCH3-208ENST00000443727 INPP4AQ96PE3 977 aaPredicted RBP23.08■■□□□ 1.29
LRCH3-208ENST00000443727 SNX14Q9Y5W7 946 aa23.08■■□□□ 1.29
LRCH3-208ENST00000443727 LAMA2P24043 3122 aaKnown RBP23.08■■□□□ 1.28
LRCH3-208ENST00000443727 FIBPO43427 364 aa23.07■■□□□ 1.28
LRCH3-208ENST00000443727 NEDD9Q14511 834 aa23.07■■□□□ 1.28
LRCH3-208ENST00000443727 MFSD10Q14728 455 aa23.07■■□□□ 1.28
LRCH3-208ENST00000443727 UBE2SQ16763 222 aa23.07■■□□□ 1.28
LRCH3-208ENST00000443727 KIAA0753Q2KHM9 967 aa23.07■■□□□ 1.28
LRCH3-208ENST00000443727 HSDL1Q3SXM5 330 aa23.07■■□□□ 1.28
LRCH3-208ENST00000443727 Q6ZUG5 572 aa23.07■■□□□ 1.28
LRCH3-208ENST00000443727 OTOP2Q7RTS6 562 aa23.07■■□□□ 1.28
LRCH3-208ENST00000443727 NLRX1Q86UT6 975 aa23.07■■□□□ 1.28
LRCH3-208ENST00000443727 CCDC155Q8N6L0 562 aa23.07■■□□□ 1.28
LRCH3-208ENST00000443727 PPP4R2Q9NY27 417 aa23.07■■□□□ 1.28
LRCH3-208ENST00000443727 STXBP5LQ9Y2K9 1186 aa23.07■■□□□ 1.28
LRCH3-208ENST00000443727 V9GY48 417 aaPredicted RBP23.07■■□□□ 1.28
LRCH3-208ENST00000443727 CNTNAP5Q8WYK1 1306 aa23.07■■□□□ 1.28
LRCH3-208ENST00000443727 SPATA31C2B4DYI2 1134 aa23.06■■□□□ 1.28
LRCH3-208ENST00000443727 F2P00734 622 aa23.06■■□□□ 1.28
LRCH3-208ENST00000443727 PSMA5P28066 241 aa23.06■■□□□ 1.28
LRCH3-208ENST00000443727 ICAM3P32942 547 aa23.06■■□□□ 1.28
LRCH3-208ENST00000443727 NAPAP54920 295 aa23.06■■□□□ 1.28
LRCH3-208ENST00000443727 GDF6Q6KF10 455 aaPredicted RBP23.06■■□□□ 1.28
LRCH3-208ENST00000443727 SESTD1Q86VW0 696 aa23.06■■□□□ 1.28
LRCH3-208ENST00000443727 HERVK_113Q902F9 699 aa23.06■■□□□ 1.28
LRCH3-208ENST00000443727 SEMA6BQ9H3T3 888 aa23.06■■□□□ 1.28
LRCH3-208ENST00000443727 CCDC196A0A1B0GTZ2 297 aa23.05■■□□□ 1.28
LRCH3-208ENST00000443727 PITPNM1O00562 1244 aa23.05■■□□□ 1.28
LRCH3-208ENST00000443727 METAP2P50579 478 aaKnown RBP eCLIP23.05■■□□□ 1.28
LRCH3-208ENST00000443727 RCAN1P53805 252 aa23.05■■□□□ 1.28
LRCH3-208ENST00000443727 APOBRQ0VD83 1088 aa23.05■■□□□ 1.28
LRCH3-208ENST00000443727 WWC2Q6AWC2 1192 aa23.05■■□□□ 1.28
LRCH3-208ENST00000443727 CYFIP1Q7L576 1253 aa23.05■■□□□ 1.28
LRCH3-208ENST00000443727 DEFB128Q7Z7B8 93 aa23.05■■□□□ 1.28
LRCH3-208ENST00000443727 BRF1Q92994 677 aa23.05■■□□□ 1.28
LRCH3-208ENST00000443727 EHMT1Q9H9B1 1298 aa23.05■■□□□ 1.28
LRCH3-208ENST00000443727 HDAC6Q9UBN7 1215 aa23.05■■□□□ 1.28
LRCH3-208ENST00000443727 ZBBXA8MT70 800 aa23.04■■□□□ 1.28
LRCH3-208ENST00000443727 PFKMP08237 780 aa23.04■■□□□ 1.28
LRCH3-208ENST00000443727 HOXD8P13378 290 aaPredicted RBP23.04■■□□□ 1.28
LRCH3-208ENST00000443727 RASIP1Q5U651 963 aa23.04■■□□□ 1.28
LRCH3-208ENST00000443727 METTL7BQ6UX53 244 aa23.04■■□□□ 1.28
LRCH3-208ENST00000443727 GUCD1Q96NT3 240 aa23.04■■□□□ 1.28
LRCH3-208ENST00000443727 GTF2IRD1Q9UHL9 959 aa23.04■■□□□ 1.28
LRCH3-208ENST00000443727 RPS6KB1P23443 525 aa23.03■■□□□ 1.28
LRCH3-208ENST00000443727 DNAJB2P25686 324 aa23.03■■□□□ 1.28
LRCH3-208ENST00000443727 CDC27P30260 824 aa23.03■■□□□ 1.28
LRCH3-208ENST00000443727 RFC2P35250 354 aa23.03■■□□□ 1.28
LRCH3-208ENST00000443727 PPP1R18Q6NYC8 613 aa23.03■■□□□ 1.28
LRCH3-208ENST00000443727 CAGE1Q8TC20 777 aa23.03■■□□□ 1.28
LRCH3-208ENST00000443727 CDHR1Q96JP9 859 aa23.03■■□□□ 1.28
LRCH3-208ENST00000443727 FTOQ9C0B1 505 aaKnown RBP eCLIP23.03■■□□□ 1.28
LRCH3-208ENST00000443727 BCAS3Q9H6U6 928 aa23.03■■□□□ 1.28
LRCH3-208ENST00000443727 CXXC1Q9P0U4 656 aaPredicted RBP23.03■■□□□ 1.28
LRCH3-208ENST00000443727 PCDHA6Q9UN73 950 aa23.03■■□□□ 1.28
LRCH3-208ENST00000443727 PCDHA8Q9Y5H6 950 aa23.03■■□□□ 1.28
LRCH3-208ENST00000443727 MYH7BA7E2Y1 1941 aa23.02■■□□□ 1.28
LRCH3-208ENST00000443727 TMEM265A0A087WTH1 108 aa23.02■■□□□ 1.28
LRCH3-208ENST00000443727 GRXCR1A8MXD5 290 aa23.02■■□□□ 1.28
LRCH3-208ENST00000443727 hCG_1984214I3L0E3 225 aa23.02■■□□□ 1.28
LRCH3-208ENST00000443727 HAS3O00219 553 aa23.02■■□□□ 1.28
LRCH3-208ENST00000443727 IQCF3P0C7M6 154 aa23.02■■□□□ 1.28
LRCH3-208ENST00000443727 ACTN1P12814 892 aa23.02■■□□□ 1.28
LRCH3-208ENST00000443727 ADCY7P51828 1080 aa23.02■■□□□ 1.28
LRCH3-208ENST00000443727 SP4Q02446 784 aa23.02■■□□□ 1.28
LRCH3-208ENST00000443727 FUT2Q10981 343 aa23.02■■□□□ 1.28
LRCH3-208ENST00000443727 SEMA3FQ13275 785 aa23.02■■□□□ 1.28
LRCH3-208ENST00000443727 ERICH6BQ5W0A0 696 aa23.02■■□□□ 1.28
LRCH3-208ENST00000443727 ZNF713Q8N859 430 aaPredicted RBP23.02■■□□□ 1.28
LRCH3-208ENST00000443727 GIMAP8Q8ND71 665 aaPredicted RBP23.02■■□□□ 1.28
LRCH3-208ENST00000443727 TIFAQ96CG3 184 aa23.02■■□□□ 1.28
LRCH3-208ENST00000443727 TTYH1Q9H313 450 aaPredicted RBP23.02■■□□□ 1.28
LRCH3-208ENST00000443727 SLC4A7Q9Y6M7 1214 aa23.02■■□□□ 1.28
LRCH3-208ENST00000443727 ADD1P35611 737 aaKnown RBP23.01■■□□□ 1.27
LRCH3-208ENST00000443727 AFAP1L1Q8TED9 768 aa23.01■■□□□ 1.27
LRCH3-208ENST00000443727 GPRASP2Q96D09 838 aa23.01■■□□□ 1.27
LRCH3-208ENST00000443727 CDX2Q99626 313 aaPredicted RBP23.01■■□□□ 1.27
LRCH3-208ENST00000443727 SENP7Q9BQF6 1050 aa23.01■■□□□ 1.27
LRCH3-208ENST00000443727 C16orf70Q9BSU1 422 aa23.01■■□□□ 1.27
LRCH3-208ENST00000443727 USP26Q9BXU7 913 aa23.01■■□□□ 1.27
LRCH3-208ENST00000443727 RIC8AQ9NPQ8 531 aa23.01■■□□□ 1.27
LRCH3-208ENST00000443727 FAM217BQ9NTX9 383 aaPredicted RBP23.01■■□□□ 1.27
LRCH3-208ENST00000443727 MSRAQ9UJ68 235 aa23.01■■□□□ 1.27
LRCH3-208ENST00000443727 SMCO2A6NFE2 343 aa23■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms