RNA–Protein interactions for RNA: ENST00000443700.5

AP1S3-206, Transcript of adaptor related protein complex 1 subunit sigma 3, humanhuman

TSL 1 (best) BASIC

Gene AP1S3, Length 1,785 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3-206ENST00000443700 DYNLL2Q96FJ2 89 aa17.03■□□□□ 0.32
AP1S3-206ENST00000443700 EHD2Q9NZN4 543 aa17.03■□□□□ 0.32
AP1S3-206ENST00000443700 COL4A3BPQ9Y5P4 624 aa17.03■□□□□ 0.32
AP1S3-206ENST00000443700 CDK5RAP2Q96SN8 1893 aa17.03■□□□□ 0.32
AP1S3-206ENST00000443700 COL16A1Q07092 1604 aaPredicted RBP17.03■□□□□ 0.32
AP1S3-206ENST00000443700 BUB1O43683 1085 aa17.02■□□□□ 0.32
AP1S3-206ENST00000443700 TXKP42681 527 aa17.02■□□□□ 0.32
AP1S3-206ENST00000443700 IRX3P78415 501 aaPredicted RBP17.02■□□□□ 0.32
AP1S3-206ENST00000443700 SETQ01105 290 aaPredicted RBP17.02■□□□□ 0.32
AP1S3-206ENST00000443700 CCDC40Q4G0X9 1142 aa17.02■□□□□ 0.32
AP1S3-206ENST00000443700 YTHDF3Q7Z739 585 aaKnown RBP17.02■□□□□ 0.32
AP1S3-206ENST00000443700 MYOCDQ8IZQ8 938 aa17.02■□□□□ 0.32
AP1S3-206ENST00000443700 IQCKQ8N0W5 287 aa17.02■□□□□ 0.32
AP1S3-206ENST00000443700 ARFGAP2Q8N6H7 521 aa17.02■□□□□ 0.32
AP1S3-206ENST00000443700 HPS3Q969F9 1004 aa17.02■□□□□ 0.32
AP1S3-206ENST00000443700 CEP63Q96MT8 703 aa17.02■□□□□ 0.32
AP1S3-206ENST00000443700 PNMA5Q96PV4 448 aa17.02■□□□□ 0.32
AP1S3-206ENST00000443700 NYXQ9GZU5 481 aa17.02■□□□□ 0.32
AP1S3-206ENST00000443700 EPN3Q9H201 632 aa17.02■□□□□ 0.32
AP1S3-206ENST00000443700 EPB41L5Q9HCM4 733 aa17.02■□□□□ 0.32
AP1S3-206ENST00000443700 SMARCAL1Q9NZC9 954 aa17.02■□□□□ 0.32
AP1S3-206ENST00000443700 SALL4Q9UJQ4 1053 aa17.02■□□□□ 0.32
AP1S3-206ENST00000443700 NFU1Q9UMS0 254 aa17.02■□□□□ 0.32
AP1S3-206ENST00000443700 ATP6V0A2Q9Y487 856 aa17.02■□□□□ 0.32
AP1S3-206ENST00000443700 PCDHGC5Q9Y5F6 944 aa17.02■□□□□ 0.32
AP1S3-206ENST00000443700 SNED1Q8TER0 1413 aa17.02■□□□□ 0.31
AP1S3-206ENST00000443700 MYH7BA7E2Y1 1941 aa17.02■□□□□ 0.31
AP1S3-206ENST00000443700 LDHBP07195 334 aaKnown RBP17.02■□□□□ 0.31
AP1S3-206ENST00000443700 NR1D1P20393 614 aa17.02■□□□□ 0.31
AP1S3-206ENST00000443700 KLRK1P26718 216 aa17.02■□□□□ 0.31
AP1S3-206ENST00000443700 RPS8P62241 208 aaKnown RBP17.02■□□□□ 0.31
AP1S3-206ENST00000443700 FKBP3Q00688 224 aaKnown RBP17.02■□□□□ 0.31
AP1S3-206ENST00000443700 GUCY2DQ02846 1103 aa17.02■□□□□ 0.31
AP1S3-206ENST00000443700 PDIA5Q14554 519 aa17.02■□□□□ 0.31
AP1S3-206ENST00000443700 KRT79Q5XKE5 535 aa17.02■□□□□ 0.31
AP1S3-206ENST00000443700 WDR66Q8TBY9 1149 aa17.02■□□□□ 0.31
AP1S3-206ENST00000443700 TAF4BQ92750 862 aa17.02■□□□□ 0.31
AP1S3-206ENST00000443700 MTMR9Q96QG7 549 aa17.02■□□□□ 0.31
AP1S3-206ENST00000443700 EHD4Q9H223 541 aa17.02■□□□□ 0.31
AP1S3-206ENST00000443700 TFCP2L1Q9NZI6 479 aa17.02■□□□□ 0.31
AP1S3-206ENST00000443700 GGA2Q9UJY4 613 aa17.02■□□□□ 0.31
AP1S3-206ENST00000443700 GOLGA6L10A6NI86 522 aa17.01■□□□□ 0.31
AP1S3-206ENST00000443700 BTNL10A8MVZ5 291 aa17.01■□□□□ 0.31
AP1S3-206ENST00000443700 NKRFO15226 690 aaKnown RBP eCLIP17.01■□□□□ 0.31
AP1S3-206ENST00000443700 PALMO75781 387 aa17.01■□□□□ 0.31
AP1S3-206ENST00000443700 FSBPO95073 299 aa17.01■□□□□ 0.31
AP1S3-206ENST00000443700 RASA1P20936 1047 aa17.01■□□□□ 0.31
AP1S3-206ENST00000443700 CARSP49589 748 aaKnown RBP17.01■□□□□ 0.31
AP1S3-206ENST00000443700 EHHADHQ08426 723 aa17.01■□□□□ 0.31
AP1S3-206ENST00000443700 SLC18A3Q16572 532 aa17.01■□□□□ 0.31
AP1S3-206ENST00000443700 IFI16Q16666 785 aaKnown RBP17.01■□□□□ 0.31
AP1S3-206ENST00000443700 SLC4A8Q2Y0W8 1093 aa17.01■□□□□ 0.31
AP1S3-206ENST00000443700 TMEM119Q4V9L6 283 aa17.01■□□□□ 0.31
AP1S3-206ENST00000443700 C10orf76Q5T2E6 689 aa17.01■□□□□ 0.31
AP1S3-206ENST00000443700 MEI1Q5TIA1 1274 aa17.01■□□□□ 0.31
AP1S3-206ENST00000443700 LRIG3Q6UXM1 1119 aa17.01■□□□□ 0.31
AP1S3-206ENST00000443700 DYMQ7RTS9 669 aa17.01■□□□□ 0.31
AP1S3-206ENST00000443700 OTUD6BQ8N6M0 293 aa17.01■□□□□ 0.31
AP1S3-206ENST00000443700 SNX29Q8TEQ0 813 aa17.01■□□□□ 0.31
AP1S3-206ENST00000443700 ATP6V1G3Q96LB4 118 aa17.01■□□□□ 0.31
AP1S3-206ENST00000443700 HINFPQ9BQA5 517 aa17.01■□□□□ 0.31
AP1S3-206ENST00000443700 MTMR7Q9Y216 660 aa17.01■□□□□ 0.31
AP1S3-206ENST00000443700 A0A0G2JS52 829 aa17■□□□□ 0.31
AP1S3-206ENST00000443700 MEFVO15553 781 aaPredicted RBP17■□□□□ 0.31
AP1S3-206ENST00000443700 LDHCP07864 332 aa17■□□□□ 0.31
AP1S3-206ENST00000443700 GLI1P08151 1106 aa17■□□□□ 0.31
AP1S3-206ENST00000443700 LSP1P33241 339 aa17■□□□□ 0.31
AP1S3-206ENST00000443700 KCNMA1Q12791 1236 aa17■□□□□ 0.31
AP1S3-206ENST00000443700 ANKRD13CQ8N6S4 541 aa17■□□□□ 0.31
AP1S3-206ENST00000443700 SH3RF3Q8TEJ3 882 aaPredicted RBP17■□□□□ 0.31
AP1S3-206ENST00000443700 IFT81Q8WYA0 676 aa17■□□□□ 0.31
AP1S3-206ENST00000443700 LSM14BQ9BX40 385 aaKnown RBP17■□□□□ 0.31
AP1S3-206ENST00000443700 PPP1R37O75864 691 aa17■□□□□ 0.31
AP1S3-206ENST00000443700 KRT14P02533 472 aa17■□□□□ 0.31
AP1S3-206ENST00000443700 GOLGA8HP0CJ92 632 aa17■□□□□ 0.31
AP1S3-206ENST00000443700 HSPA9P38646 679 aaKnown RBP17■□□□□ 0.31
AP1S3-206ENST00000443700 MARSP56192 900 aaKnown RBP17■□□□□ 0.31
AP1S3-206ENST00000443700 PPP4CP60510 307 aa17■□□□□ 0.31
AP1S3-206ENST00000443700 CDC37Q16543 378 aaPredicted RBP17■□□□□ 0.31
AP1S3-206ENST00000443700 ZCWPW2Q504Y3 356 aa17■□□□□ 0.31
AP1S3-206ENST00000443700 FAM83BQ5T0W9 1011 aa17■□□□□ 0.31
AP1S3-206ENST00000443700 CCDC91Q7Z6B0 441 aa17■□□□□ 0.31
AP1S3-206ENST00000443700 PRPF38AQ8NAV1 312 aaKnown RBP17■□□□□ 0.31
AP1S3-206ENST00000443700 DDX12PQ92771 950 aa17■□□□□ 0.31
AP1S3-206ENST00000443700 MS4A14Q96JA4 679 aa17■□□□□ 0.31
AP1S3-206ENST00000443700 INPP4AQ96PE3 977 aaPredicted RBP17■□□□□ 0.31
AP1S3-206ENST00000443700 SAMM50Q9Y512 469 aa17■□□□□ 0.31
AP1S3-206ENST00000443700 ATP8B3O60423 1300 aa16.99■□□□□ 0.31
AP1S3-206ENST00000443700 KDM3AQ9Y4C1 1321 aa16.99■□□□□ 0.31
AP1S3-206ENST00000443700 ZNF233A6NK53 670 aa16.99■□□□□ 0.31
AP1S3-206ENST00000443700 ATP1A2P50993 1020 aa16.99■□□□□ 0.31
AP1S3-206ENST00000443700 ADCY7P51828 1080 aa16.99■□□□□ 0.31
AP1S3-206ENST00000443700 MRPS25P82663 173 aaKnown RBP16.99■□□□□ 0.31
AP1S3-206ENST00000443700 CUL1Q13616 776 aa16.99■□□□□ 0.31
AP1S3-206ENST00000443700 ASIC2Q16515 512 aa16.99■□□□□ 0.31
AP1S3-206ENST00000443700 PTGISQ16647 500 aa16.99■□□□□ 0.31
AP1S3-206ENST00000443700 TTC19Q6DKK2 380 aaPredicted RBP16.99■□□□□ 0.31
AP1S3-206ENST00000443700 PPP1R18Q6NYC8 613 aa16.99■□□□□ 0.31
AP1S3-206ENST00000443700 SH2D3CQ8N5H7 860 aa16.99■□□□□ 0.31
AP1S3-206ENST00000443700 USP38Q8NB14 1042 aa16.99■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms