RNA–Protein interactions for RNA: ENST00000442830.5

PTPRE-203, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

TSL 5

Gene PTPRE, Length 779 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-203ENST00000442830 WDR5P61964 334 aaKnown RBP16■□□□□ 0.15
PTPRE-203ENST00000442830 TAP1Q03518 808 aa16■□□□□ 0.15
PTPRE-203ENST00000442830 IKBKEQ14164 716 aa16■□□□□ 0.15
PTPRE-203ENST00000442830 GRM4Q14833 912 aa16■□□□□ 0.15
PTPRE-203ENST00000442830 PGM5Q15124 567 aa16■□□□□ 0.15
PTPRE-203ENST00000442830 SKIV2LQ15477 1246 aaKnown RBP16■□□□□ 0.15
PTPRE-203ENST00000442830 CELF3Q5SZQ8 465 aaKnown RBP16■□□□□ 0.15
PTPRE-203ENST00000442830 VSIG10LQ86VR7 867 aa16■□□□□ 0.15
PTPRE-203ENST00000442830 RIOX1Q9H6W3 641 aa16■□□□□ 0.15
PTPRE-203ENST00000442830 HDAC6Q9UBN7 1215 aa16■□□□□ 0.15
PTPRE-203ENST00000442830 MTCH2Q9Y6C9 303 aa16■□□□□ 0.15
PTPRE-203ENST00000442830 KAT6AQ92794 2004 aa16■□□□□ 0.15
PTPRE-203ENST00000442830 MICAL3Q7RTP6 2002 aa15.99■□□□□ 0.15
PTPRE-203ENST00000442830 SIP14410 1827 aa15.99■□□□□ 0.15
PTPRE-203ENST00000442830 IFIT3O14879 490 aaKnown RBP15.99■□□□□ 0.15
PTPRE-203ENST00000442830 CAND2O75155 1236 aa15.99■□□□□ 0.15
PTPRE-203ENST00000442830 MYCLP12524 364 aaPredicted RBP15.99■□□□□ 0.15
PTPRE-203ENST00000442830 WTAPQ15007 396 aa15.99■□□□□ 0.15
PTPRE-203ENST00000442830 TTC22Q5TAA0 569 aa15.99■□□□□ 0.15
PTPRE-203ENST00000442830 MYSM1Q5VVJ2 828 aa15.99■□□□□ 0.15
PTPRE-203ENST00000442830 STAG2Q8N3U4 1231 aa15.99■□□□□ 0.15
PTPRE-203ENST00000442830 NCOA7Q8NI08 942 aa15.99■□□□□ 0.15
PTPRE-203ENST00000442830 ARNTL2Q8WYA1 636 aa15.99■□□□□ 0.15
PTPRE-203ENST00000442830 SPATA33Q96N06 139 aa15.99■□□□□ 0.15
PTPRE-203ENST00000442830 CTAGE1Q96RT6 745 aa15.99■□□□□ 0.15
PTPRE-203ENST00000442830 RAD9AQ99638 391 aa15.99■□□□□ 0.15
PTPRE-203ENST00000442830 ALG1Q9BT22 464 aa15.99■□□□□ 0.15
PTPRE-203ENST00000442830 COL4A4P53420 1690 aaPredicted RBP15.99■□□□□ 0.15
PTPRE-203ENST00000442830 BDP1A6H8Y1 2624 aa15.98■□□□□ 0.15
PTPRE-203ENST00000442830 PNMA6FA0A0J9YX94 578 aa15.98■□□□□ 0.15
PTPRE-203ENST00000442830 OPLAHO14841 1288 aa15.98■□□□□ 0.15
PTPRE-203ENST00000442830 GGPS1O95749 300 aa15.98■□□□□ 0.15
PTPRE-203ENST00000442830 GNAT1P11488 350 aa15.98■□□□□ 0.15
PTPRE-203ENST00000442830 CATIPQ7Z7H3 387 aa15.98■□□□□ 0.15
PTPRE-203ENST00000442830 EXOC6Q8TAG9 804 aa15.98■□□□□ 0.15
PTPRE-203ENST00000442830 DHX38Q92620 1227 aaKnown RBP15.98■□□□□ 0.15
PTPRE-203ENST00000442830 MAP3K14Q99558 947 aa15.98■□□□□ 0.15
PTPRE-203ENST00000442830 MTA3Q9BTC8 594 aa15.98■□□□□ 0.15
PTPRE-203ENST00000442830 MLXIPQ9HAP2 919 aa15.98■□□□□ 0.15
PTPRE-203ENST00000442830 TCF20Q9UGU0 1960 aaKnown RBP15.97■□□□□ 0.15
PTPRE-203ENST00000442830 NOP56O00567 594 aaKnown RBP15.97■□□□□ 0.15
PTPRE-203ENST00000442830 GJB5O95377 273 aa15.97■□□□□ 0.15
PTPRE-203ENST00000442830 ZNF286BP0CG31 522 aa15.97■□□□□ 0.15
PTPRE-203ENST00000442830 NEDD9Q14511 834 aa15.97■□□□□ 0.15
PTPRE-203ENST00000442830 XRRA1Q6P2D8 792 aa15.97■□□□□ 0.15
PTPRE-203ENST00000442830 CYB5R4Q7L1T6 521 aa15.97■□□□□ 0.15
PTPRE-203ENST00000442830 HOMER1Q86YM7 354 aa15.97■□□□□ 0.15
PTPRE-203ENST00000442830 USP26Q9BXU7 913 aa15.97■□□□□ 0.15
PTPRE-203ENST00000442830 FRMPD4Q14CM0 1322 aa15.96■□□□□ 0.15
PTPRE-203ENST00000442830 NBNO60934 754 aa15.96■□□□□ 0.15
PTPRE-203ENST00000442830 LGR5O75473 907 aa15.96■□□□□ 0.15
PTPRE-203ENST00000442830 UBA1P22314 1058 aaKnown RBP15.96■□□□□ 0.15
PTPRE-203ENST00000442830 SMARCA1P28370 1054 aa15.96■□□□□ 0.15
PTPRE-203ENST00000442830 ICAM3P32942 547 aa15.96■□□□□ 0.15
PTPRE-203ENST00000442830 KIF5BP33176 963 aa15.96■□□□□ 0.15
PTPRE-203ENST00000442830 SERINC5Q86VE9 423 aa15.96■□□□□ 0.15
PTPRE-203ENST00000442830 GIMAP8Q8ND71 665 aaPredicted RBP15.96■□□□□ 0.15
PTPRE-203ENST00000442830 CUL5Q93034 780 aa15.96■□□□□ 0.15
PTPRE-203ENST00000442830 HLA-CQ95604 372 aa15.96■□□□□ 0.15
PTPRE-203ENST00000442830 TGS1Q96RS0 853 aaKnown RBP15.96■□□□□ 0.15
PTPRE-203ENST00000442830 LZTS2Q9BRK4 669 aa15.96■□□□□ 0.15
PTPRE-203ENST00000442830 ZNF215Q9UL58 517 aaPredicted RBP15.96■□□□□ 0.15
PTPRE-203ENST00000442830 INSL6Q9Y581 213 aa15.96■□□□□ 0.15
PTPRE-203ENST00000442830 C17orf102A2RUQ5 167 aa15.95■□□□□ 0.14
PTPRE-203ENST00000442830 H3BRB1 525 aa15.95■□□□□ 0.14
PTPRE-203ENST00000442830 PPP1R11O60927 126 aaPredicted RBP15.95■□□□□ 0.14
PTPRE-203ENST00000442830 RGS20O76081 388 aa15.95■□□□□ 0.14
PTPRE-203ENST00000442830 AMHP03971 560 aa15.95■□□□□ 0.14
PTPRE-203ENST00000442830 CYP21A2P08686 494 aa15.95■□□□□ 0.14
PTPRE-203ENST00000442830 BMP1P13497 986 aa15.95■□□□□ 0.14
PTPRE-203ENST00000442830 HOXA13P31271 388 aaPredicted RBP15.95■□□□□ 0.14
PTPRE-203ENST00000442830 GNAQP50148 359 aa15.95■□□□□ 0.14
PTPRE-203ENST00000442830 TROAPQ12815 778 aa15.95■□□□□ 0.14
PTPRE-203ENST00000442830 TRIM71Q2Q1W2 868 aaKnown RBP15.95■□□□□ 0.14
PTPRE-203ENST00000442830 HSDL1Q3SXM5 330 aa15.95■□□□□ 0.14
PTPRE-203ENST00000442830 ZNF618Q5T7W0 954 aa15.95■□□□□ 0.14
PTPRE-203ENST00000442830 METTL7BQ6UX53 244 aa15.95■□□□□ 0.14
PTPRE-203ENST00000442830 TMTC2Q8N394 836 aa15.95■□□□□ 0.14
PTPRE-203ENST00000442830 CTCFLQ8NI51 663 aaPredicted RBP15.95■□□□□ 0.14
PTPRE-203ENST00000442830 PPP1R13LQ8WUF5 828 aa15.95■□□□□ 0.14
PTPRE-203ENST00000442830 SAMD11Q96NU1 681 aa15.95■□□□□ 0.14
PTPRE-203ENST00000442830 PIGSQ96S52 555 aa15.95■□□□□ 0.14
PTPRE-203ENST00000442830 C1QTNF1Q9BXJ1 281 aa15.95■□□□□ 0.14
PTPRE-203ENST00000442830 TUT1Q9H6E5 874 aaKnown RBP15.95■□□□□ 0.14
PTPRE-203ENST00000442830 BRWD1Q9NSI6 2320 aa15.95■□□□□ 0.14
PTPRE-203ENST00000442830 REV3LO60673 3130 aa15.94■□□□□ 0.14
PTPRE-203ENST00000442830 RSPH10B2B2RC85 870 aa15.94■□□□□ 0.14
PTPRE-203ENST00000442830 FIBPO43427 364 aa15.94■□□□□ 0.14
PTPRE-203ENST00000442830 DDAH1O94760 285 aa15.94■□□□□ 0.14
PTPRE-203ENST00000442830 RSPH10BP0C881 870 aa15.94■□□□□ 0.14
PTPRE-203ENST00000442830 CHMLP26374 656 aa15.94■□□□□ 0.14
PTPRE-203ENST00000442830 HOXC8P31273 242 aa15.94■□□□□ 0.14
PTPRE-203ENST00000442830 ERVK-21P61565 698 aa15.94■□□□□ 0.14
PTPRE-203ENST00000442830 GRB10Q13322 594 aa15.94■□□□□ 0.14
PTPRE-203ENST00000442830 GPNMBQ14956 572 aa15.94■□□□□ 0.14
PTPRE-203ENST00000442830 CASC1Q6TDU7 716 aa15.94■□□□□ 0.14
PTPRE-203ENST00000442830 FCHSD1Q86WN1 690 aa15.94■□□□□ 0.14
PTPRE-203ENST00000442830 ATP6V0A1Q93050 837 aa15.94■□□□□ 0.14
PTPRE-203ENST00000442830 RRP36Q96EU6 259 aaKnown RBP15.94■□□□□ 0.14
PTPRE-203ENST00000442830 CDHR1Q96JP9 859 aa15.94■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms