RNA–Protein interactions for RNA: ENST00000441517.6

SCAP-207, Transcript of SREBF chaperone, humanhuman

TSL 2

Gene SCAP, Length 3,748 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAP-207ENST00000441517 LIMA1Q9UHB6 759 aaKnown RBP16.58■□□□□ 0.24
SCAP-207ENST00000441517 VAV2P52735 878 aa16.58■□□□□ 0.24
SCAP-207ENST00000441517 SEMA6BQ9H3T3 888 aa16.58■□□□□ 0.24
SCAP-207ENST00000441517 BCAS3Q9H6U6 928 aa16.58■□□□□ 0.24
SCAP-207ENST00000441517 DDX4Q9NQI0 724 aaKnown RBP16.58■□□□□ 0.24
SCAP-207ENST00000441517 GFPT2O94808 682 aa16.57■□□□□ 0.24
SCAP-207ENST00000441517 CDC37Q16543 378 aaPredicted RBP16.57■□□□□ 0.24
SCAP-207ENST00000441517 FAM76AQ8TAV0 307 aa16.57■□□□□ 0.24
SCAP-207ENST00000441517 CSRNP1Q96S65 589 aa16.57■□□□□ 0.24
SCAP-207ENST00000441517 ARMCX3Q9UH62 379 aaPredicted RBP16.57■□□□□ 0.24
SCAP-207ENST00000441517 LRRIQ3A6PVS8 624 aaPredicted RBP16.57■□□□□ 0.24
SCAP-207ENST00000441517 ZBTB39O15060 712 aa16.57■□□□□ 0.24
SCAP-207ENST00000441517 CCT5P48643 541 aa16.57■□□□□ 0.24
SCAP-207ENST00000441517 VPS41P49754 854 aa16.57■□□□□ 0.24
SCAP-207ENST00000441517 E2F4Q16254 413 aa16.57■□□□□ 0.24
SCAP-207ENST00000441517 WDR78Q5VTH9 848 aa16.57■□□□□ 0.24
SCAP-207ENST00000441517 FOXR1Q6PIV2 292 aa16.57■□□□□ 0.24
SCAP-207ENST00000441517 NSMFQ6X4W1 530 aa16.57■□□□□ 0.24
SCAP-207ENST00000441517 ANKZF1Q9H8Y5 726 aa16.57■□□□□ 0.24
SCAP-207ENST00000441517 QTRT2Q9H974 415 aaKnown RBP16.57■□□□□ 0.24
SCAP-207ENST00000441517 PPP1R12BO60237 982 aaPredicted RBP16.57■□□□□ 0.24
SCAP-207ENST00000441517 ADCY1Q08828 1119 aa16.57■□□□□ 0.24
SCAP-207ENST00000441517 NEDD1Q8NHV4 660 aa16.57■□□□□ 0.24
SCAP-207ENST00000441517 ERMNQ8TAM6 284 aa16.57■□□□□ 0.24
SCAP-207ENST00000441517 PPANQ9NQ55 473 aaKnown RBP16.57■□□□□ 0.24
SCAP-207ENST00000441517 MTMR4Q9NYA4 1195 aa16.57■□□□□ 0.24
SCAP-207ENST00000441517 DMGDHQ9UI17 866 aaKnown RBP16.57■□□□□ 0.24
SCAP-207ENST00000441517 SLIT3O75094 1523 aa16.57■□□□□ 0.24
SCAP-207ENST00000441517 RSPH10B2B2RC85 870 aa16.56■□□□□ 0.24
SCAP-207ENST00000441517 PALMO75781 387 aa16.56■□□□□ 0.24
SCAP-207ENST00000441517 RSPH10BP0C881 870 aa16.56■□□□□ 0.24
SCAP-207ENST00000441517 TMEM132AQ24JP5 1023 aa16.56■□□□□ 0.24
SCAP-207ENST00000441517 IRF2BP1Q8IU81 584 aa16.56■□□□□ 0.24
SCAP-207ENST00000441517 NUP58Q9BVL2 599 aa16.56■□□□□ 0.24
SCAP-207ENST00000441517 BUB1BO60566 1050 aaPredicted RBP16.56■□□□□ 0.24
SCAP-207ENST00000441517 HERVK_113P62684 666 aa16.56■□□□□ 0.24
SCAP-207ENST00000441517 FKBP3Q00688 224 aaKnown RBP16.56■□□□□ 0.24
SCAP-207ENST00000441517 COASYQ13057 564 aa16.56■□□□□ 0.24
SCAP-207ENST00000441517 SLC35G1Q2M3R5 365 aa16.56■□□□□ 0.24
SCAP-207ENST00000441517 CERS3Q8IU89 383 aa16.56■□□□□ 0.24
SCAP-207ENST00000441517 KIAA0895Q8NCT3 520 aa16.56■□□□□ 0.24
SCAP-207ENST00000441517 ZBTB12Q9Y330 459 aaPredicted RBP16.56■□□□□ 0.24
SCAP-207ENST00000441517 CCDC169A6NNP5 214 aa16.56■□□□□ 0.24
SCAP-207ENST00000441517 EXOC3O60645 756 aa16.56■□□□□ 0.24
SCAP-207ENST00000441517 SLC9A1P19634 815 aa16.56■□□□□ 0.24
SCAP-207ENST00000441517 COPB2P35606 906 aa16.56■□□□□ 0.24
SCAP-207ENST00000441517 MAN2A1Q16706 1144 aa16.56■□□□□ 0.24
SCAP-207ENST00000441517 DAAM2Q86T65 1068 aa16.56■□□□□ 0.24
SCAP-207ENST00000441517 VPS36Q86VN1 386 aa16.56■□□□□ 0.24
SCAP-207ENST00000441517 SFR1Q86XK3 245 aa16.56■□□□□ 0.24
SCAP-207ENST00000441517 PACSIN1Q9BY11 444 aa16.56■□□□□ 0.24
SCAP-207ENST00000441517 EHD4Q9H223 541 aa16.56■□□□□ 0.24
SCAP-207ENST00000441517 SPATA31A5Q5VU36 1347 aa16.55■□□□□ 0.24
SCAP-207ENST00000441517 SPATA31A7Q8IWB4 1347 aa16.55■□□□□ 0.24
SCAP-207ENST00000441517 GOLGA8IPA6NC78 632 aa16.55■□□□□ 0.24
SCAP-207ENST00000441517 GOLGA8JA6NMD2 632 aa16.55■□□□□ 0.24
SCAP-207ENST00000441517 LIG3P49916 1009 aa16.55■□□□□ 0.24
SCAP-207ENST00000441517 GIMAP8Q8ND71 665 aaPredicted RBP16.55■□□□□ 0.24
SCAP-207ENST00000441517 FAM212AQ96EL1 285 aa16.55■□□□□ 0.24
SCAP-207ENST00000441517 C5P01031 1676 aa16.55■□□□□ 0.24
SCAP-207ENST00000441517 PCP11498 1178 aaKnown RBP16.55■□□□□ 0.24
SCAP-207ENST00000441517 XRCC5P13010 732 aaKnown RBP16.55■□□□□ 0.24
SCAP-207ENST00000441517 PSMC6P62333 389 aa16.55■□□□□ 0.24
SCAP-207ENST00000441517 TTI2Q6NXR4 508 aa16.55■□□□□ 0.24
SCAP-207ENST00000441517 FBXO11Q86XK2 927 aa16.55■□□□□ 0.24
SCAP-207ENST00000441517 TAB3Q8N5C8 712 aaPredicted RBP16.55■□□□□ 0.24
SCAP-207ENST00000441517 DUSP9Q99956 384 aaKnown RBP16.55■□□□□ 0.24
SCAP-207ENST00000441517 THAP9Q9H5L6 903 aa16.55■□□□□ 0.24
SCAP-207ENST00000441517 JMJD4Q9H9V9 463 aa16.55■□□□□ 0.24
SCAP-207ENST00000441517 PPIP5K2O43314 1243 aa16.55■□□□□ 0.24
SCAP-207ENST00000441517 HEXIM1O94992 359 aaKnown RBP16.55■□□□□ 0.24
SCAP-207ENST00000441517 TRIM49P0CI25 452 aa16.55■□□□□ 0.24
SCAP-207ENST00000441517 TRIM49CP0CI26 452 aa16.55■□□□□ 0.24
SCAP-207ENST00000441517 SSTR3P32745 418 aaPredicted RBP16.55■□□□□ 0.24
SCAP-207ENST00000441517 FAM83BQ5T0W9 1011 aa16.55■□□□□ 0.24
SCAP-207ENST00000441517 ZNF746Q6NUN9 644 aaPredicted RBP16.55■□□□□ 0.24
SCAP-207ENST00000441517 DDX42Q86XP3 938 aaKnown RBP eCLIP16.55■□□□□ 0.24
SCAP-207ENST00000441517 OGFOD1Q8N543 542 aa16.55■□□□□ 0.24
SCAP-207ENST00000441517 TRIM58Q8NG06 486 aa16.55■□□□□ 0.24
SCAP-207ENST00000441517 LZTS2Q9BRK4 669 aa16.55■□□□□ 0.24
SCAP-207ENST00000441517 FGFBP2Q9BYJ0 223 aa16.55■□□□□ 0.24
SCAP-207ENST00000441517 COL4A3BPQ9Y5P4 624 aa16.55■□□□□ 0.24
SCAP-207ENST00000441517 GNGT1P63211 74 aa16.54■□□□□ 0.24
SCAP-207ENST00000441517 GRB10Q13322 594 aa16.54■□□□□ 0.24
SCAP-207ENST00000441517 ZC2HC1CQ53FD0 456 aaPredicted RBP16.54■□□□□ 0.24
SCAP-207ENST00000441517 BCAS4Q8TDM0 211 aa16.54■□□□□ 0.24
SCAP-207ENST00000441517 SELENOOQ9BVL4 669 aa16.54■□□□□ 0.24
SCAP-207ENST00000441517 ANO3Q9BYT9 981 aa16.54■□□□□ 0.24
SCAP-207ENST00000441517 LRRC4BQ9NT99 713 aa16.54■□□□□ 0.24
SCAP-207ENST00000441517 SHTN1A0MZ66 631 aa16.54■□□□□ 0.24
SCAP-207ENST00000441517 ABCB5Q2M3G0 1257 aa16.54■□□□□ 0.24
SCAP-207ENST00000441517 TBC1D22AQ8WUA7 517 aa16.54■□□□□ 0.24
SCAP-207ENST00000441517 RTFDC1Q9BY42 306 aaPredicted RBP16.54■□□□□ 0.24
SCAP-207ENST00000441517 DNAJC17Q9NVM6 304 aaKnown RBP16.54■□□□□ 0.24
SCAP-207ENST00000441517 CAPN11Q9UMQ6 739 aa16.54■□□□□ 0.24
SCAP-207ENST00000441517 MRC1P22897 1456 aa16.54■□□□□ 0.24
SCAP-207ENST00000441517 PALM3A6NDB9 673 aaPredicted RBP16.54■□□□□ 0.24
SCAP-207ENST00000441517 PDE2AO00408 941 aaPredicted RBP16.54■□□□□ 0.24
SCAP-207ENST00000441517 KIAA0754O94854 1291 aa16.54■□□□□ 0.24
SCAP-207ENST00000441517 ZNF211Q13398 564 aaPredicted RBP16.54■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms