RNA–Protein interactions for RNA: ENST00000441443.6

SHOX2-203, Transcript of short stature homeobox 2, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SHOX2, Length 3,038 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-203ENST00000441443 TPX2Q9ULW0 747 aaKnown RBP22.35■■□□□ 1.17
SHOX2-203ENST00000441443 MINPP1Q9UNW1 487 aa22.35■■□□□ 1.17
SHOX2-203ENST00000441443 THRAP3Q9Y2W1 955 aaKnown RBP22.35■■□□□ 1.17
SHOX2-203ENST00000441443 PJA2O43164 708 aa22.35■■□□□ 1.17
SHOX2-203ENST00000441443 CACNA2D4Q7Z3S7 1137 aa22.35■■□□□ 1.17
SHOX2-203ENST00000441443 WHAMMQ8TF30 809 aa22.35■■□□□ 1.17
SHOX2-203ENST00000441443 TACO1Q9BSH4 297 aaKnown RBP22.35■■□□□ 1.17
SHOX2-203ENST00000441443 TAF1P21675 1872 aa22.35■■□□□ 1.17
SHOX2-203ENST00000441443 GCOM1H8Y6P7 765 aaPredicted RBP22.34■■□□□ 1.17
SHOX2-203ENST00000441443 DDAH1O94760 285 aa22.34■■□□□ 1.17
SHOX2-203ENST00000441443 MYZAPP0CAP1 466 aa22.34■■□□□ 1.17
SHOX2-203ENST00000441443 ODF2Q5BJF6 829 aa22.34■■□□□ 1.17
SHOX2-203ENST00000441443 NBPF5PQ86XG9 351 aaPredicted RBP22.34■■□□□ 1.17
SHOX2-203ENST00000441443 DDX42Q86XP3 938 aaKnown RBP eCLIP22.34■■□□□ 1.17
SHOX2-203ENST00000441443 KIAA0895Q8NCT3 520 aa22.34■■□□□ 1.17
SHOX2-203ENST00000441443 CCDC194A0A1B0GVG4 234 aa22.34■■□□□ 1.17
SHOX2-203ENST00000441443 GNPATO15228 680 aa22.34■■□□□ 1.17
SHOX2-203ENST00000441443 HSD17B3P37058 310 aa22.34■■□□□ 1.17
SHOX2-203ENST00000441443 GGA2Q9UJY4 613 aa22.34■■□□□ 1.17
SHOX2-203ENST00000441443 LEMD3Q9Y2U8 911 aa22.34■■□□□ 1.17
SHOX2-203ENST00000441443 CDC37Q16543 378 aaPredicted RBP22.33■■□□□ 1.17
SHOX2-203ENST00000441443 ANKRD20A8PQ5CZ79 823 aa22.33■■□□□ 1.17
SHOX2-203ENST00000441443 BAP1Q92560 729 aa22.33■■□□□ 1.17
SHOX2-203ENST00000441443 CCDC47Q96A33 483 aaKnown RBP22.33■■□□□ 1.17
SHOX2-203ENST00000441443 GOLGB1Q14789 3259 aaKnown RBP22.33■■□□□ 1.17
SHOX2-203ENST00000441443 COL16A1Q07092 1604 aaPredicted RBP22.33■■□□□ 1.17
SHOX2-203ENST00000441443 ANKRD36CQ5JPF3 1778 aa22.33■■□□□ 1.17
SHOX2-203ENST00000441443 SF3A3Q12874 501 aaKnown RBP eCLIP22.33■■□□□ 1.17
SHOX2-203ENST00000441443 ENOX2Q16206 610 aaKnown RBP22.33■■□□□ 1.17
SHOX2-203ENST00000441443 PTPROQ16827 1216 aa22.33■■□□□ 1.17
SHOX2-203ENST00000441443 ACTR5Q9H9F9 607 aaPredicted RBP22.33■■□□□ 1.17
SHOX2-203ENST00000441443 MYL1P05976 194 aa22.33■■□□□ 1.16
SHOX2-203ENST00000441443 DRP2Q13474 957 aa22.33■■□□□ 1.16
SHOX2-203ENST00000441443 ASTE1Q2TB18 679 aaPredicted RBP22.33■■□□□ 1.16
SHOX2-203ENST00000441443 CABP7Q86V35 215 aa22.33■■□□□ 1.16
SHOX2-203ENST00000441443 SGSM3Q96HU1 749 aa22.33■■□□□ 1.16
SHOX2-203ENST00000441443 SEC16BQ96JE7 1060 aa22.33■■□□□ 1.16
SHOX2-203ENST00000441443 HSPA9P38646 679 aaKnown RBP22.32■■□□□ 1.16
SHOX2-203ENST00000441443 ERVK-9P63128 1117 aa22.32■■□□□ 1.16
SHOX2-203ENST00000441443 TXNRD1Q16881 649 aa22.32■■□□□ 1.16
SHOX2-203ENST00000441443 ARFGAP2Q8N6H7 521 aa22.32■■□□□ 1.16
SHOX2-203ENST00000441443 FAM84BQ96KN1 310 aaPredicted RBP22.32■■□□□ 1.16
SHOX2-203ENST00000441443 CCSER1Q9C0I3 900 aa22.32■■□□□ 1.16
SHOX2-203ENST00000441443 SLC12A6Q9UHW9 1150 aa22.32■■□□□ 1.16
SHOX2-203ENST00000441443 MTMR7Q9Y216 660 aa22.32■■□□□ 1.16
SHOX2-203ENST00000441443 COL4A1P02462 1669 aa22.32■■□□□ 1.16
SHOX2-203ENST00000441443 TRAPPC3O43617 180 aa22.32■■□□□ 1.16
SHOX2-203ENST00000441443 RPSAP08865 295 aaKnown RBP22.32■■□□□ 1.16
SHOX2-203ENST00000441443 PAX7P23759 505 aa22.32■■□□□ 1.16
SHOX2-203ENST00000441443 KLRC1P26715 233 aa22.32■■□□□ 1.16
SHOX2-203ENST00000441443 TANGO6Q9C0B7 1094 aa22.32■■□□□ 1.16
SHOX2-203ENST00000441443 RNF14Q9UBS8 474 aa22.32■■□□□ 1.16
SHOX2-203ENST00000441443 CNOT8Q9UFF9 292 aaKnown RBP22.32■■□□□ 1.16
SHOX2-203ENST00000441443 TSKSQ9UJT2 592 aa22.32■■□□□ 1.16
SHOX2-203ENST00000441443 CTNNA1P35221 906 aaKnown RBP22.31■■□□□ 1.16
SHOX2-203ENST00000441443 UAP1Q16222 522 aaPredicted RBP22.31■■□□□ 1.16
SHOX2-203ENST00000441443 HGSNATQ68CP4 663 aa22.31■■□□□ 1.16
SHOX2-203ENST00000441443 RNF10Q8N5U6 811 aaKnown RBP22.31■■□□□ 1.16
SHOX2-203ENST00000441443 SETDB2Q96T68 719 aa22.31■■□□□ 1.16
SHOX2-203ENST00000441443 USP17L12C9JPN9 530 aa22.31■■□□□ 1.16
SHOX2-203ENST00000441443 USP17L21D6R901 530 aa22.31■■□□□ 1.16
SHOX2-203ENST00000441443 CALML3P27482 149 aa22.31■■□□□ 1.16
SHOX2-203ENST00000441443 SCTRP47872 440 aa22.31■■□□□ 1.16
SHOX2-203ENST00000441443 TAF1DQ9H5J8 278 aaPredicted RBP22.31■■□□□ 1.16
SHOX2-203ENST00000441443 PCDHA4Q9UN74 947 aa22.31■■□□□ 1.16
SHOX2-203ENST00000441443 GCFC2P16383 781 aaKnown RBP22.31■■□□□ 1.16
SHOX2-203ENST00000441443 ARID5AQ03989 594 aa22.31■■□□□ 1.16
SHOX2-203ENST00000441443 ZNF844Q08AG5 666 aa22.31■■□□□ 1.16
SHOX2-203ENST00000441443 PDXDC1Q6P996 788 aa22.31■■□□□ 1.16
SHOX2-203ENST00000441443 DHX37Q8IY37 1157 aaKnown RBP22.31■■□□□ 1.16
SHOX2-203ENST00000441443 INPP4AQ96PE3 977 aaPredicted RBP22.31■■□□□ 1.16
SHOX2-203ENST00000441443 PLCB1Q9NQ66 1216 aa22.31■■□□□ 1.16
SHOX2-203ENST00000441443 CCDC189A1A4V9 331 aa22.3■■□□□ 1.16
SHOX2-203ENST00000441443 PHF20L1A8MW92 1017 aa22.3■■□□□ 1.16
SHOX2-203ENST00000441443 DCDC2CA8MYV0 355 aa22.3■■□□□ 1.16
SHOX2-203ENST00000441443 EZRP15311 586 aaKnown RBP22.3■■□□□ 1.16
SHOX2-203ENST00000441443 BYSLQ13895 437 aaKnown RBP22.3■■□□□ 1.16
SHOX2-203ENST00000441443 PPP2R5AQ15172 486 aa22.3■■□□□ 1.16
SHOX2-203ENST00000441443 CCDC84Q86UT8 332 aaPredicted RBP22.3■■□□□ 1.16
SHOX2-203ENST00000441443 RAPGEF5Q92565 580 aa22.3■■□□□ 1.16
SHOX2-203ENST00000441443 BCORQ6W2J9 1755 aa22.3■■□□□ 1.16
SHOX2-203ENST00000441443 H0YGN5 161 aa22.29■■□□□ 1.16
SHOX2-203ENST00000441443 PPP1R12BO60237 982 aaPredicted RBP22.29■■□□□ 1.16
SHOX2-203ENST00000441443 PRDX5P30044 214 aa22.29■■□□□ 1.16
SHOX2-203ENST00000441443 CLNS1AP54105 237 aaKnown RBP22.29■■□□□ 1.16
SHOX2-203ENST00000441443 RPS8P62241 208 aaKnown RBP22.29■■□□□ 1.16
SHOX2-203ENST00000441443 MAN2A1Q16706 1144 aa22.29■■□□□ 1.16
SHOX2-203ENST00000441443 CACNA2D3Q8IZS8 1091 aa22.29■■□□□ 1.16
SHOX2-203ENST00000441443 C1orf131Q8NDD1 294 aaKnown RBP22.29■■□□□ 1.16
SHOX2-203ENST00000441443 UBLCP1Q8WVY7 318 aaPredicted RBP22.29■■□□□ 1.16
SHOX2-203ENST00000441443 NLRP3Q96P20 1036 aa22.29■■□□□ 1.16
SHOX2-203ENST00000441443 RIOK1Q9BRS2 568 aaKnown RBP22.29■■□□□ 1.16
SHOX2-203ENST00000441443 PACSIN1Q9BY11 444 aa22.29■■□□□ 1.16
SHOX2-203ENST00000441443 GOLPH3Q9H4A6 298 aa22.29■■□□□ 1.16
SHOX2-203ENST00000441443 BSDC1Q9NW68 430 aaPredicted RBP22.29■■□□□ 1.16
SHOX2-203ENST00000441443 NOVA2Q9UNW9 492 aaKnown RBP22.29■■□□□ 1.16
SHOX2-203ENST00000441443 NFS1Q9Y697 457 aa22.29■■□□□ 1.16
SHOX2-203ENST00000441443 FLT1P17948 1338 aa22.29■■□□□ 1.16
SHOX2-203ENST00000441443 ECHS1P30084 290 aa22.29■■□□□ 1.16
SHOX2-203ENST00000441443 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP22.29■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms