RNA–Protein interactions for RNA: ENST00000439962.1

EDEM3-203, Transcript of ER degradation enhancing alpha-mannosidase like protein 3, humanhuman

TSL 1 (best)

Gene EDEM3, Length 2,872 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EDEM3-203ENST00000439962 FAM47CQ5HY64 1035 aa5.37□□□□□ -1.55
EDEM3-203ENST00000439962 MORN1Q5T089 497 aa5.37□□□□□ -1.55
EDEM3-203ENST00000439962 AXDND1Q5T1B0 1012 aaPredicted RBP5.37□□□□□ -1.55
EDEM3-203ENST00000439962 RESP18Q5W5W9 173 aa5.37□□□□□ -1.55
EDEM3-203ENST00000439962 FOXD4L3Q6VB84 417 aaPredicted RBP5.37□□□□□ -1.55
EDEM3-203ENST00000439962 ARMCX2Q7L311 632 aa5.37□□□□□ -1.55
EDEM3-203ENST00000439962 RIOX2Q8IUF8 465 aa5.37□□□□□ -1.55
EDEM3-203ENST00000439962 TRIM22Q8IYM9 498 aa5.37□□□□□ -1.55
EDEM3-203ENST00000439962 GMCL1P1Q8NEA9 526 aa5.37□□□□□ -1.55
EDEM3-203ENST00000439962 CCDC112Q8NEF3 446 aa5.37□□□□□ -1.55
EDEM3-203ENST00000439962 SOCS4Q8WXH5 440 aa5.37□□□□□ -1.55
EDEM3-203ENST00000439962 MKL1Q969V6 931 aa5.37□□□□□ -1.55
EDEM3-203ENST00000439962 SHISA4Q96DD7 197 aa5.37□□□□□ -1.55
EDEM3-203ENST00000439962 TINF2Q9BSI4 451 aa5.37□□□□□ -1.55
EDEM3-203ENST00000439962 RNF26Q9BY78 433 aaPredicted RBP5.37□□□□□ -1.55
EDEM3-203ENST00000439962 TRIM5Q9C035 493 aa5.37□□□□□ -1.55
EDEM3-203ENST00000439962 KCNF1Q9H3M0 494 aa5.37□□□□□ -1.55
EDEM3-203ENST00000439962 LY9Q9HBG7 655 aa5.37□□□□□ -1.55
EDEM3-203ENST00000439962 ZCCHC17Q9NP64 241 aaKnown RBP5.37□□□□□ -1.55
EDEM3-203ENST00000439962 GJB4Q9NTQ9 266 aa5.37□□□□□ -1.55
EDEM3-203ENST00000439962 MAD2L2Q9UI95 211 aa5.37□□□□□ -1.55
EDEM3-203ENST00000439962 V9GY48 417 aaPredicted RBP5.37□□□□□ -1.55
EDEM3-203ENST00000439962 RPTORQ8N122 1335 aa5.37□□□□□ -1.55
EDEM3-203ENST00000439962 AP5Z1O43299 807 aa5.37□□□□□ -1.55
EDEM3-203ENST00000439962 GNASQ5JWF2 1037 aa5.37□□□□□ -1.55
EDEM3-203ENST00000439962 NT5DC1Q5TFE4 455 aa5.37□□□□□ -1.55
EDEM3-203ENST00000439962 FBXO11Q86XK2 927 aa5.37□□□□□ -1.55
EDEM3-203ENST00000439962 DGKHQ86XP1 1220 aa5.37□□□□□ -1.55
EDEM3-203ENST00000439962 DHX40Q8IX18 779 aaKnown RBP5.37□□□□□ -1.55
EDEM3-203ENST00000439962 MB21D1Q8N884 522 aa5.37□□□□□ -1.55
EDEM3-203ENST00000439962 GMCL1Q96IK5 515 aa5.37□□□□□ -1.55
EDEM3-203ENST00000439962 TAAR1Q96RJ0 339 aa5.37□□□□□ -1.55
EDEM3-203ENST00000439962 ALG1Q9BT22 464 aa5.37□□□□□ -1.55
EDEM3-203ENST00000439962 GOLPH3LQ9H4A5 285 aa5.37□□□□□ -1.55
EDEM3-203ENST00000439962 MROH8Q9H579 483 aa5.37□□□□□ -1.55
EDEM3-203ENST00000439962 GINM1Q9NU53 330 aa5.37□□□□□ -1.55
EDEM3-203ENST00000439962 COL11A1P12107 1806 aaPredicted RBP5.37□□□□□ -1.55
EDEM3-203ENST00000439962 MYO7AQ13402 2215 aa5.37□□□□□ -1.55
EDEM3-203ENST00000439962 SLC15A5A6NIM6 579 aa5.37□□□□□ -1.55
EDEM3-203ENST00000439962 GOLGA8AA7E2F4 631 aa5.37□□□□□ -1.55
EDEM3-203ENST00000439962 PPP1R11O60927 126 aaPredicted RBP5.37□□□□□ -1.55
EDEM3-203ENST00000439962 DDAH1O94760 285 aa5.37□□□□□ -1.55
EDEM3-203ENST00000439962 GJB1P08034 283 aa5.37□□□□□ -1.55
EDEM3-203ENST00000439962 PTPAQ15257 358 aa5.37□□□□□ -1.55
EDEM3-203ENST00000439962 SEC23AQ15436 765 aa5.37□□□□□ -1.55
EDEM3-203ENST00000439962 LY6KQ17RY6 165 aa5.37□□□□□ -1.55
EDEM3-203ENST00000439962 SLC35G1Q2M3R5 365 aa5.37□□□□□ -1.55
EDEM3-203ENST00000439962 OLFML2BQ68BL8 750 aa5.37□□□□□ -1.55
EDEM3-203ENST00000439962 CXCL17Q6UXB2 119 aa5.37□□□□□ -1.55
EDEM3-203ENST00000439962 CHRDL2Q6WN34 429 aa5.37□□□□□ -1.55
EDEM3-203ENST00000439962 LUZP1Q86V48 1076 aa5.37□□□□□ -1.55
EDEM3-203ENST00000439962 LRRC8AQ8IWT6 810 aa5.37□□□□□ -1.55
EDEM3-203ENST00000439962 SRBD1Q8N5C6 995 aaKnown RBP5.37□□□□□ -1.55
EDEM3-203ENST00000439962 REPS2Q8NFH8 660 aa5.37□□□□□ -1.55
EDEM3-203ENST00000439962 RASGRP4Q8TDF6 673 aa5.37□□□□□ -1.55
EDEM3-203ENST00000439962 ARMC5Q96C12 935 aa5.37□□□□□ -1.55
EDEM3-203ENST00000439962 FAM161BQ96MY7 647 aa5.37□□□□□ -1.55
EDEM3-203ENST00000439962 GTPBP4Q9BZE4 634 aaKnown RBP5.37□□□□□ -1.55
EDEM3-203ENST00000439962 DNAJC25Q9H1X3 360 aa5.37□□□□□ -1.55
EDEM3-203ENST00000439962 BCAS3Q9H6U6 928 aa5.37□□□□□ -1.55
EDEM3-203ENST00000439962 XPNPEP3Q9NQH7 507 aa5.37□□□□□ -1.55
EDEM3-203ENST00000439962 CYP39A1Q9NYL5 469 aa5.37□□□□□ -1.55
EDEM3-203ENST00000439962 COL20A1Q9P218 1284 aa5.37□□□□□ -1.55
EDEM3-203ENST00000439962 SEC63Q9UGP8 760 aaKnown RBP5.37□□□□□ -1.55
EDEM3-203ENST00000439962 SOWAHBA6NEL2 793 aa5.36□□□□□ -1.55
EDEM3-203ENST00000439962 H0YGN5 161 aa5.36□□□□□ -1.55
EDEM3-203ENST00000439962 STRNO43815 780 aa5.36□□□□□ -1.55
EDEM3-203ENST00000439962 SLC25A27O95847 323 aa5.36□□□□□ -1.55
EDEM3-203ENST00000439962 SNAI1O95863 264 aaPredicted RBP5.36□□□□□ -1.55
EDEM3-203ENST00000439962 MMP1P03956 469 aa5.36□□□□□ -1.55
EDEM3-203ENST00000439962 RARBP10826 455 aa5.36□□□□□ -1.55
EDEM3-203ENST00000439962 ATP2B1P20020 1258 aa5.36□□□□□ -1.55
EDEM3-203ENST00000439962 CDC27P30260 824 aa5.36□□□□□ -1.55
EDEM3-203ENST00000439962 GJA8P48165 433 aa5.36□□□□□ -1.55
EDEM3-203ENST00000439962 PSMC6P62333 389 aa5.36□□□□□ -1.55
EDEM3-203ENST00000439962 TROAPQ12815 778 aa5.36□□□□□ -1.55
EDEM3-203ENST00000439962 ARHGEF16Q5VV41 709 aa5.36□□□□□ -1.55
EDEM3-203ENST00000439962 KRT40Q6A162 431 aa5.36□□□□□ -1.55
EDEM3-203ENST00000439962 FAM173BQ6P4H8 233 aa5.36□□□□□ -1.55
EDEM3-203ENST00000439962 FAM160B2Q86V87 743 aa5.36□□□□□ -1.55
EDEM3-203ENST00000439962 DCAF4Q8WV16 495 aa5.36□□□□□ -1.55
EDEM3-203ENST00000439962 AIFM3Q96NN9 605 aa5.36□□□□□ -1.55
EDEM3-203ENST00000439962 RMDN3Q96TC7 470 aa5.36□□□□□ -1.55
EDEM3-203ENST00000439962 CDKN2AIPQ9NXV6 580 aaPredicted RBP5.36□□□□□ -1.55
EDEM3-203ENST00000439962 SLC5A4Q9NY91 659 aa5.36□□□□□ -1.55
EDEM3-203ENST00000439962 ASTN1O14525 1302 aa5.36□□□□□ -1.55
EDEM3-203ENST00000439962 CHD9Q3L8U1 2897 aa5.36□□□□□ -1.55
EDEM3-203ENST00000439962 THSD7BQ9C0I4 1608 aa5.36□□□□□ -1.55
EDEM3-203ENST00000439962 GOLGA6L9A6NEM1 432 aa5.36□□□□□ -1.55
EDEM3-203ENST00000439962 DDX39AO00148 427 aaKnown RBP5.36□□□□□ -1.55
EDEM3-203ENST00000439962 ZNF202O95125 648 aa5.36□□□□□ -1.55
EDEM3-203ENST00000439962 CSPG5O95196 566 aa5.36□□□□□ -1.55
EDEM3-203ENST00000439962 ICAM1P05362 532 aa5.36□□□□□ -1.55
EDEM3-203ENST00000439962 TRAPPC10P48553 1259 aa5.36□□□□□ -1.55
EDEM3-203ENST00000439962 FAM193AP78312 1265 aa5.36□□□□□ -1.55
EDEM3-203ENST00000439962 PDE4DQ08499 809 aa5.36□□□□□ -1.55
EDEM3-203ENST00000439962 ACVR2BQ13705 512 aa5.36□□□□□ -1.55
EDEM3-203ENST00000439962 CAMK4Q16566 473 aa5.36□□□□□ -1.55
EDEM3-203ENST00000439962 TPRNQ4KMQ1 711 aa5.36□□□□□ -1.55
EDEM3-203ENST00000439962 NOM1Q5C9Z4 860 aaKnown RBP5.36□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms