RNA–Protein interactions for RNA: ENST00000439936.6

COPS3-203, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 5 BASIC

Gene COPS3, Length 1,394 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-203ENST00000439936 IGHA2P01877 340 aa8.65□□□□□ -1.02
COPS3-203ENST00000439936 PDIA3P30101 505 aaKnown RBP8.65□□□□□ -1.02
COPS3-203ENST00000439936 CDC27P30260 824 aa8.65□□□□□ -1.02
COPS3-203ENST00000439936 ADD1P35611 737 aaKnown RBP8.65□□□□□ -1.02
COPS3-203ENST00000439936 NEK4P51957 841 aa8.65□□□□□ -1.02
COPS3-203ENST00000439936 KCNH2Q12809 1159 aa8.65□□□□□ -1.02
COPS3-203ENST00000439936 MTFR1Q15390 333 aa8.65□□□□□ -1.02
COPS3-203ENST00000439936 LINC01559Q495D7 138 aa8.65□□□□□ -1.02
COPS3-203ENST00000439936 USH1GQ495M9 461 aa8.65□□□□□ -1.02
COPS3-203ENST00000439936 LCE2CQ5TA81 110 aa8.65□□□□□ -1.02
COPS3-203ENST00000439936 MICU3Q86XE3 530 aa8.65□□□□□ -1.02
COPS3-203ENST00000439936 ANKRD35Q8N283 1001 aa8.65□□□□□ -1.02
COPS3-203ENST00000439936 PIBF1Q8WXW3 757 aa8.65□□□□□ -1.02
COPS3-203ENST00000439936 TRIB2Q92519 343 aa8.65□□□□□ -1.02
COPS3-203ENST00000439936 IRF7Q92985 503 aa8.65□□□□□ -1.02
COPS3-203ENST00000439936 ARMC5Q96C12 935 aa8.65□□□□□ -1.02
COPS3-203ENST00000439936 LZTS2Q9BRK4 669 aa8.65□□□□□ -1.02
COPS3-203ENST00000439936 SPZ1Q9BXG8 430 aa8.65□□□□□ -1.02
COPS3-203ENST00000439936 BACH2Q9BYV9 841 aa8.65□□□□□ -1.02
COPS3-203ENST00000439936 C22orf23Q9BZE7 217 aa8.65□□□□□ -1.02
COPS3-203ENST00000439936 ACAD9Q9H845 621 aa8.65□□□□□ -1.02
COPS3-203ENST00000439936 PNMA2Q9UL42 364 aa8.65□□□□□ -1.02
COPS3-203ENST00000439936 NAP1L2Q9ULW6 460 aaPredicted RBP8.65□□□□□ -1.02
COPS3-203ENST00000439936 DIS3Q9Y2L1 958 aaKnown RBP8.65□□□□□ -1.02
COPS3-203ENST00000439936 GOLGA8AA7E2F4 631 aa8.64□□□□□ -1.03
COPS3-203ENST00000439936 GOLGA8BA8MQT2 603 aa8.64□□□□□ -1.03
COPS3-203ENST00000439936 NFIBO00712 420 aa8.64□□□□□ -1.03
COPS3-203ENST00000439936 MYCP01106 439 aaPredicted RBP8.64□□□□□ -1.03
COPS3-203ENST00000439936 CNTN2Q02246 1040 aa8.64□□□□□ -1.03
COPS3-203ENST00000439936 CACNB2Q08289 660 aaPredicted RBP8.64□□□□□ -1.03
COPS3-203ENST00000439936 BAATQ14032 418 aaPredicted RBP8.64□□□□□ -1.03
COPS3-203ENST00000439936 PPP2R5BQ15173 497 aa8.64□□□□□ -1.03
COPS3-203ENST00000439936 NR6A1Q15406 480 aa8.64□□□□□ -1.03
COPS3-203ENST00000439936 RTN1Q16799 776 aa8.64□□□□□ -1.03
COPS3-203ENST00000439936 NSMFQ6X4W1 530 aa8.64□□□□□ -1.03
COPS3-203ENST00000439936 HOMER1Q86YM7 354 aa8.64□□□□□ -1.03
COPS3-203ENST00000439936 TRMT44Q8IYL2 757 aaKnown RBP8.64□□□□□ -1.03
COPS3-203ENST00000439936 RGS22Q8NE09 1264 aa8.64□□□□□ -1.03
COPS3-203ENST00000439936 BAP1Q92560 729 aa8.64□□□□□ -1.03
COPS3-203ENST00000439936 ZNF274Q96GC6 653 aaPredicted RBP8.64□□□□□ -1.03
COPS3-203ENST00000439936 MAML3Q96JK9 1138 aa8.64□□□□□ -1.03
COPS3-203ENST00000439936 ZNF333Q96JL9 665 aa8.64□□□□□ -1.03
COPS3-203ENST00000439936 KIF2CQ99661 725 aa8.64□□□□□ -1.03
COPS3-203ENST00000439936 APBA2Q99767 749 aa8.64□□□□□ -1.03
COPS3-203ENST00000439936 AMNQ9BXJ7 453 aa8.64□□□□□ -1.03
COPS3-203ENST00000439936 A1CFQ9NQ94 594 aaKnown RBP8.64□□□□□ -1.03
COPS3-203ENST00000439936 SLC5A4Q9NY91 659 aa8.64□□□□□ -1.03
COPS3-203ENST00000439936 CYP39A1Q9NYL5 469 aa8.64□□□□□ -1.03
COPS3-203ENST00000439936 MAP10Q9P2G4 905 aa8.64□□□□□ -1.03
COPS3-203ENST00000439936 PCDHA1Q9Y5I3 950 aa8.64□□□□□ -1.03
COPS3-203ENST00000439936 MCM3APO60318 1980 aa8.64□□□□□ -1.03
COPS3-203ENST00000439936 hCG_1642624A0A1W2PR95 340 aa8.63□□□□□ -1.03
COPS3-203ENST00000439936 HMGCRP04035 888 aa8.63□□□□□ -1.03
COPS3-203ENST00000439936 INHAP05111 366 aa8.63□□□□□ -1.03
COPS3-203ENST00000439936 PDIA4P13667 645 aaKnown RBP8.63□□□□□ -1.03
COPS3-203ENST00000439936 CYP2C19P33261 490 aa8.63□□□□□ -1.03
COPS3-203ENST00000439936 RBM25P49756 843 aaKnown RBP8.63□□□□□ -1.03
COPS3-203ENST00000439936 RCAN1P53805 252 aa8.63□□□□□ -1.03
COPS3-203ENST00000439936 AK2P54819 239 aa8.63□□□□□ -1.03
COPS3-203ENST00000439936 UBXN2AP68543 259 aa8.63□□□□□ -1.03
COPS3-203ENST00000439936 CCT2P78371 535 aaKnown RBP8.63□□□□□ -1.03
COPS3-203ENST00000439936 PRAMEF19Q5SWL8 479 aa8.63□□□□□ -1.03
COPS3-203ENST00000439936 OLFML2BQ68BL8 750 aa8.63□□□□□ -1.03
COPS3-203ENST00000439936 TMTC3Q6ZXV5 915 aa8.63□□□□□ -1.03
COPS3-203ENST00000439936 FAM133AQ8N9E0 248 aa8.63□□□□□ -1.03
COPS3-203ENST00000439936 ZSCAN1Q8NBB4 408 aa8.63□□□□□ -1.03
COPS3-203ENST00000439936 RRP36Q96EU6 259 aaKnown RBP8.63□□□□□ -1.03
COPS3-203ENST00000439936 FGD4Q96M96 766 aa8.63□□□□□ -1.03
COPS3-203ENST00000439936 PURBQ96QR8 312 aaKnown RBP8.63□□□□□ -1.03
COPS3-203ENST00000439936 RBM28Q9NW13 759 aaKnown RBP8.63□□□□□ -1.03
COPS3-203ENST00000439936 MRPL11Q9Y3B7 192 aaKnown RBP8.63□□□□□ -1.03
COPS3-203ENST00000439936 ABCB11O95342 1321 aa8.63□□□□□ -1.03
COPS3-203ENST00000439936 KIAA0100Q14667 2235 aaKnown RBP8.62□□□□□ -1.03
COPS3-203ENST00000439936 CCDC196A0A1B0GTZ2 297 aa8.62□□□□□ -1.03
COPS3-203ENST00000439936 PTPDC1A2A3K4 754 aa8.62□□□□□ -1.03
COPS3-203ENST00000439936 OPLAHO14841 1288 aa8.62□□□□□ -1.03
COPS3-203ENST00000439936 GPR37L1O60883 481 aa8.62□□□□□ -1.03
COPS3-203ENST00000439936 CCL5P13501 91 aa8.62□□□□□ -1.03
COPS3-203ENST00000439936 METAP2P50579 478 aaKnown RBP eCLIP8.62□□□□□ -1.03
COPS3-203ENST00000439936 RPS6P62753 249 aaKnown RBP8.62□□□□□ -1.03
COPS3-203ENST00000439936 TRAF1Q13077 416 aa8.62□□□□□ -1.03
COPS3-203ENST00000439936 STK3Q13188 491 aa8.62□□□□□ -1.03
COPS3-203ENST00000439936 NTRK3Q16288 839 aa8.62□□□□□ -1.03
COPS3-203ENST00000439936 MAP3K21Q5TCX8 1036 aa8.62□□□□□ -1.03
COPS3-203ENST00000439936 MFSD14CQ5VZR4 134 aa8.62□□□□□ -1.03
COPS3-203ENST00000439936 MAMDC4Q6UXC1 1216 aa8.62□□□□□ -1.03
COPS3-203ENST00000439936 RNF207Q6ZRF8 634 aa8.62□□□□□ -1.03
COPS3-203ENST00000439936 EHBP1Q8NDI1 1231 aa8.62□□□□□ -1.03
COPS3-203ENST00000439936 POM121Q96HA1 1249 aa8.62□□□□□ -1.03
COPS3-203ENST00000439936 TINF2Q9BSI4 451 aa8.62□□□□□ -1.03
COPS3-203ENST00000439936 RNF208Q9H0X6 261 aa8.62□□□□□ -1.03
COPS3-203ENST00000439936 NCOA5Q9HCD5 579 aaKnown RBP8.62□□□□□ -1.03
COPS3-203ENST00000439936 TPCN1Q9ULQ1 816 aa8.62□□□□□ -1.03
COPS3-203ENST00000439936 ZNF236Q9UL36 1845 aa8.62□□□□□ -1.03
COPS3-203ENST00000439936 PFASO15067 1338 aa8.62□□□□□ -1.03
COPS3-203ENST00000439936 RPTORQ8N122 1335 aa8.62□□□□□ -1.03
COPS3-203ENST00000439936 LCTP09848 1927 aa8.62□□□□□ -1.03
COPS3-203ENST00000439936 CENPFP49454 3210 aa8.62□□□□□ -1.03
COPS3-203ENST00000439936 HTTP42858 3142 aa8.61□□□□□ -1.03
COPS3-203ENST00000439936 PRPF3O43395 683 aaKnown RBP8.61□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms