RNA–Protein interactions for RNA: ENST00000439600.2

LMO3-207, Transcript of LIM domain only 3, humanhuman

TSL 2

Gene LMO3, Length 1,044 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-207ENST00000439600 HINFPQ9BQA5 517 aa12.48□□□□□ -0.41
LMO3-207ENST00000439600 GLT8D2Q9H1C3 349 aa12.48□□□□□ -0.41
LMO3-207ENST00000439600 RANBP17Q9H2T7 1088 aaKnown RBP12.48□□□□□ -0.41
LMO3-207ENST00000439600 SLC38A10Q9HBR0 1119 aa12.48□□□□□ -0.41
LMO3-207ENST00000439600 ZNF358Q9NW07 568 aa12.48□□□□□ -0.41
LMO3-207ENST00000439600 CXXC1Q9P0U4 656 aaPredicted RBP12.48□□□□□ -0.41
LMO3-207ENST00000439600 RABGAP1Q9Y3P9 1069 aa12.48□□□□□ -0.41
LMO3-207ENST00000439600 CYTH3O43739 400 aa12.47□□□□□ -0.41
LMO3-207ENST00000439600 CTDNEP1O95476 244 aa12.47□□□□□ -0.41
LMO3-207ENST00000439600 ICAM1P05362 532 aa12.47□□□□□ -0.41
LMO3-207ENST00000439600 NR3C2P08235 984 aa12.47□□□□□ -0.41
LMO3-207ENST00000439600 SCG2P13521 617 aa12.47□□□□□ -0.41
LMO3-207ENST00000439600 VEGFBP49765 207 aa12.47□□□□□ -0.41
LMO3-207ENST00000439600 GDF10P55107 478 aa12.47□□□□□ -0.41
LMO3-207ENST00000439600 HERVK_113P62684 666 aa12.47□□□□□ -0.41
LMO3-207ENST00000439600 CCNA1P78396 465 aa12.47□□□□□ -0.41
LMO3-207ENST00000439600 DGKZQ13574 1117 aa12.47□□□□□ -0.41
LMO3-207ENST00000439600 CDC37Q16543 378 aaPredicted RBP12.47□□□□□ -0.41
LMO3-207ENST00000439600 OCLNQ16625 522 aa12.47□□□□□ -0.41
LMO3-207ENST00000439600 SND1Q7KZF4 910 aaKnown RBP eCLIP12.47□□□□□ -0.41
LMO3-207ENST00000439600 HOMER1Q86YM7 354 aa12.47□□□□□ -0.41
LMO3-207ENST00000439600 CMTR1Q8N1G2 835 aaKnown RBP12.47□□□□□ -0.41
LMO3-207ENST00000439600 PHKBQ93100 1093 aa12.47□□□□□ -0.41
LMO3-207ENST00000439600 PIGSQ96S52 555 aa12.47□□□□□ -0.41
LMO3-207ENST00000439600 PTPN18Q99952 460 aa12.47□□□□□ -0.41
LMO3-207ENST00000439600 FBXO28Q9NVF7 368 aa12.47□□□□□ -0.41
LMO3-207ENST00000439600 MRPL11Q9Y3B7 192 aaKnown RBP12.47□□□□□ -0.41
LMO3-207ENST00000439600 WASF2Q9Y6W5 498 aa12.47□□□□□ -0.41
LMO3-207ENST00000439600 DOCK1Q14185 1865 aa12.46□□□□□ -0.41
LMO3-207ENST00000439600 TMEM229AB2RXF0 380 aa12.46□□□□□ -0.41
LMO3-207ENST00000439600 FOXN1O15353 648 aa12.46□□□□□ -0.41
LMO3-207ENST00000439600 SLC25A27O95847 323 aa12.46□□□□□ -0.41
LMO3-207ENST00000439600 GJB2P29033 226 aa12.46□□□□□ -0.41
LMO3-207ENST00000439600 GNA11P29992 359 aa12.46□□□□□ -0.41
LMO3-207ENST00000439600 STAT3P40763 770 aa12.46□□□□□ -0.41
LMO3-207ENST00000439600 MAP2K1Q02750 393 aaPredicted RBP12.46□□□□□ -0.41
LMO3-207ENST00000439600 TAF1CQ15572 869 aaPredicted RBP12.46□□□□□ -0.41
LMO3-207ENST00000439600 QRICH1Q2TAL8 776 aa12.46□□□□□ -0.41
LMO3-207ENST00000439600 LARP1BQ659C4 914 aaKnown RBP12.46□□□□□ -0.41
LMO3-207ENST00000439600 MCTP2Q6DN12 878 aa12.46□□□□□ -0.41
LMO3-207ENST00000439600 GALNT17Q6IS24 598 aa12.46□□□□□ -0.41
LMO3-207ENST00000439600 TAS1R3Q7RTX0 852 aa12.46□□□□□ -0.41
LMO3-207ENST00000439600 MCF2L2Q86YR7 1114 aa12.46□□□□□ -0.41
LMO3-207ENST00000439600 CCAR1Q8IX12 1150 aaKnown RBP12.46□□□□□ -0.41
LMO3-207ENST00000439600 FAM43AQ8N2R8 423 aa12.46□□□□□ -0.41
LMO3-207ENST00000439600 SERBP1Q8NC51 408 aaKnown RBP eCLIP12.46□□□□□ -0.41
LMO3-207ENST00000439600 GPRC5AQ8NFJ5 357 aa12.46□□□□□ -0.41
LMO3-207ENST00000439600 CCDC148Q8NFR7 591 aa12.46□□□□□ -0.41
LMO3-207ENST00000439600 ATG4CQ96DT6 458 aa12.46□□□□□ -0.41
LMO3-207ENST00000439600 ALG1Q9BT22 464 aa12.46□□□□□ -0.41
LMO3-207ENST00000439600 TEX13BQ9BXU2 312 aa12.46□□□□□ -0.41
LMO3-207ENST00000439600 PRKD2Q9BZL6 878 aa12.46□□□□□ -0.41
LMO3-207ENST00000439600 MAP3K20Q9NYL2 800 aaKnown RBP12.46□□□□□ -0.41
LMO3-207ENST00000439600 PKD2L1Q9P0L9 805 aa12.46□□□□□ -0.41
LMO3-207ENST00000439600 FBXO40Q9UH90 709 aa12.46□□□□□ -0.41
LMO3-207ENST00000439600 PCDHA1Q9Y5I3 950 aa12.46□□□□□ -0.41
LMO3-207ENST00000439600 GREB1LQ9C091 1923 aaPredicted RBP12.46□□□□□ -0.42
LMO3-207ENST00000439600 ABCB11O95342 1321 aa12.45□□□□□ -0.42
LMO3-207ENST00000439600 CNTNAP5Q8WYK1 1306 aa12.45□□□□□ -0.42
LMO3-207ENST00000439600 CA12O43570 354 aa12.45□□□□□ -0.42
LMO3-207ENST00000439600 PRMT3O60678 531 aa12.45□□□□□ -0.42
LMO3-207ENST00000439600 INHAP05111 366 aa12.45□□□□□ -0.42
LMO3-207ENST00000439600 CALML3P27482 149 aa12.45□□□□□ -0.42
LMO3-207ENST00000439600 WEE1P30291 646 aa12.45□□□□□ -0.42
LMO3-207ENST00000439600 MRPL12P52815 198 aaKnown RBP12.45□□□□□ -0.42
LMO3-207ENST00000439600 MLLT1Q03111 559 aaPredicted RBP12.45□□□□□ -0.42
LMO3-207ENST00000439600 NNTQ13423 1086 aa12.45□□□□□ -0.42
LMO3-207ENST00000439600 SAFBQ15424 915 aaKnown RBP eCLIP12.45□□□□□ -0.42
LMO3-207ENST00000439600 BICD2Q8TD16 824 aa12.45□□□□□ -0.42
LMO3-207ENST00000439600 DDX11Q96FC9 970 aa12.45□□□□□ -0.42
LMO3-207ENST00000439600 BRMS1Q9HCU9 246 aa12.45□□□□□ -0.42
LMO3-207ENST00000439600 C6orf50Q9HD87 102 aa12.45□□□□□ -0.42
LMO3-207ENST00000439600 BARHL2Q9NY43 387 aa12.45□□□□□ -0.42
LMO3-207ENST00000439600 H3BQV1 296 aa12.44□□□□□ -0.42
LMO3-207ENST00000439600 IGF2BP3O00425 579 aaKnown RBP eCLIP12.44□□□□□ -0.42
LMO3-207ENST00000439600 TLR2O60603 784 aa12.44□□□□□ -0.42
LMO3-207ENST00000439600 AOC2O75106 756 aa12.44□□□□□ -0.42
LMO3-207ENST00000439600 CYP2C8P10632 490 aa12.44□□□□□ -0.42
LMO3-207ENST00000439600 FDPSP14324 419 aaKnown RBP12.44□□□□□ -0.42
LMO3-207ENST00000439600 NAPAP54920 295 aa12.44□□□□□ -0.42
LMO3-207ENST00000439600 ST3GAL1Q11201 340 aa12.44□□□□□ -0.42
LMO3-207ENST00000439600 FOXC1Q12948 553 aa12.44□□□□□ -0.42
LMO3-207ENST00000439600 PLS1Q14651 629 aa12.44□□□□□ -0.42
LMO3-207ENST00000439600 PKN1Q16512 942 aa12.44□□□□□ -0.42
LMO3-207ENST00000439600 CCDC174Q6PII3 467 aa12.44□□□□□ -0.42
LMO3-207ENST00000439600 RASGRP2Q7LDG7 609 aa12.44□□□□□ -0.42
LMO3-207ENST00000439600 HEATR3Q7Z4Q2 680 aa12.44□□□□□ -0.42
LMO3-207ENST00000439600 RIOX2Q8IUF8 465 aa12.44□□□□□ -0.42
LMO3-207ENST00000439600 CPXCR1Q8N123 301 aa12.44□□□□□ -0.42
LMO3-207ENST00000439600 TSEN2Q8NCE0 465 aaKnown RBP12.44□□□□□ -0.42
LMO3-207ENST00000439600 CHST13Q8NET6 341 aa12.44□□□□□ -0.42
LMO3-207ENST00000439600 PIBF1Q8WXW3 757 aa12.44□□□□□ -0.42
LMO3-207ENST00000439600 ABHD8Q96I13 439 aa12.44□□□□□ -0.42
LMO3-207ENST00000439600 C8orf76Q96K31 380 aa12.44□□□□□ -0.42
LMO3-207ENST00000439600 CFHR5Q9BXR6 569 aa12.44□□□□□ -0.42
LMO3-207ENST00000439600 CPVLQ9H3G5 476 aa12.44□□□□□ -0.42
LMO3-207ENST00000439600 MROH8Q9H579 483 aa12.44□□□□□ -0.42
LMO3-207ENST00000439600 RAVER2Q9HCJ3 691 aaKnown RBP12.44□□□□□ -0.42
LMO3-207ENST00000439600 PRDM10Q9NQV6 1147 aa12.44□□□□□ -0.42
LMO3-207ENST00000439600 RBPJLQ9UBG7 517 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms