RNA–Protein interactions for RNA: ENST00000439029.5

SMPD4-208, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 4

Gene SMPD4, Length 566 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-208ENST00000439029 TFAP4Q01664 338 aa11.54□□□□□ -0.56
SMPD4-208ENST00000439029 ARHGAP1Q07960 439 aa11.54□□□□□ -0.56
SMPD4-208ENST00000439029 MFSD10Q14728 455 aa11.54□□□□□ -0.56
SMPD4-208ENST00000439029 CBX2Q14781 532 aaPredicted RBP11.54□□□□□ -0.56
SMPD4-208ENST00000439029 KIAA0753Q2KHM9 967 aa11.54□□□□□ -0.56
SMPD4-208ENST00000439029 PLEKHG4Q58EX7 1191 aa11.54□□□□□ -0.56
SMPD4-208ENST00000439029 CEP85Q6P2H3 762 aa11.54□□□□□ -0.56
SMPD4-208ENST00000439029 RNF207Q6ZRF8 634 aa11.54□□□□□ -0.56
SMPD4-208ENST00000439029 ZBTB33Q86T24 672 aa11.54□□□□□ -0.56
SMPD4-208ENST00000439029 RBM23Q86U06 439 aaKnown RBP11.54□□□□□ -0.56
SMPD4-208ENST00000439029 ITPRIPQ8IWB1 547 aa11.54□□□□□ -0.56
SMPD4-208ENST00000439029 DHX37Q8IY37 1157 aaKnown RBP11.54□□□□□ -0.56
SMPD4-208ENST00000439029 CLASRPQ8N2M8 674 aaKnown RBP11.54□□□□□ -0.56
SMPD4-208ENST00000439029 NEDD1Q8NHV4 660 aa11.54□□□□□ -0.56
SMPD4-208ENST00000439029 CLEC4DQ8WXI8 215 aa11.54□□□□□ -0.56
SMPD4-208ENST00000439029 NKD2Q969F2 451 aaPredicted RBP11.54□□□□□ -0.56
SMPD4-208ENST00000439029 IL17RAQ96F46 866 aa11.54□□□□□ -0.56
SMPD4-208ENST00000439029 EPB41L4AQ9HCS5 686 aaPredicted RBP11.54□□□□□ -0.56
SMPD4-208ENST00000439029 NMT2O60551 498 aa11.53□□□□□ -0.56
SMPD4-208ENST00000439029 EYA4O95677 639 aa11.53□□□□□ -0.56
SMPD4-208ENST00000439029 APPP05067 770 aa11.53□□□□□ -0.56
SMPD4-208ENST00000439029 EDNRBP24530 442 aa11.53□□□□□ -0.56
SMPD4-208ENST00000439029 NBL1P41271 181 aa11.53□□□□□ -0.56
SMPD4-208ENST00000439029 RPS6P62753 249 aaKnown RBP11.53□□□□□ -0.56
SMPD4-208ENST00000439029 RBM10P98175 930 aaKnown RBP11.53□□□□□ -0.56
SMPD4-208ENST00000439029 CAMK1Q14012 370 aa11.53□□□□□ -0.56
SMPD4-208ENST00000439029 CCDC62Q6P9F0 684 aa11.53□□□□□ -0.56
SMPD4-208ENST00000439029 TMEM105Q8N8V8 129 aa11.53□□□□□ -0.56
SMPD4-208ENST00000439029 SEPT8Q92599 483 aa11.53□□□□□ -0.56
SMPD4-208ENST00000439029 CNTNAP3BQ96NU0 1288 aa11.53□□□□□ -0.56
SMPD4-208ENST00000439029 C11orf84Q9BUA3 381 aaPredicted RBP11.53□□□□□ -0.56
SMPD4-208ENST00000439029 CNTNAP3Q9BZ76 1288 aa11.53□□□□□ -0.56
SMPD4-208ENST00000439029 SYNPO2Q9UMS6 1093 aa11.53□□□□□ -0.56
SMPD4-208ENST00000439029 STX8Q9UNK0 236 aa11.53□□□□□ -0.56
SMPD4-208ENST00000439029 PCDHGC5Q9Y5F6 944 aa11.53□□□□□ -0.56
SMPD4-208ENST00000439029 EMSYQ7Z589 1322 aa11.53□□□□□ -0.56
SMPD4-208ENST00000439029 LINC00271P0C7V0 271 aa11.52□□□□□ -0.57
SMPD4-208ENST00000439029 DNAJB1P25685 340 aa11.52□□□□□ -0.57
SMPD4-208ENST00000439029 NRIP1P48552 1158 aa11.52□□□□□ -0.57
SMPD4-208ENST00000439029 DGKDQ16760 1214 aa11.52□□□□□ -0.57
SMPD4-208ENST00000439029 PTPN21Q16825 1174 aa11.52□□□□□ -0.57
SMPD4-208ENST00000439029 ZKSCAN2Q63HK3 967 aa11.52□□□□□ -0.57
SMPD4-208ENST00000439029 SMRP1Q8NCR6 262 aa11.52□□□□□ -0.57
SMPD4-208ENST00000439029 RMDN1Q96DB5 314 aa11.52□□□□□ -0.57
SMPD4-208ENST00000439029 RIPOR3Q96MK2 946 aa11.52□□□□□ -0.57
SMPD4-208ENST00000439029 HAUS7Q99871 368 aa11.52□□□□□ -0.57
SMPD4-208ENST00000439029 PHF7Q9BWX1 381 aaPredicted RBP11.52□□□□□ -0.57
SMPD4-208ENST00000439029 LMAN2LQ9H0V9 348 aa11.52□□□□□ -0.57
SMPD4-208ENST00000439029 RANBP17Q9H2T7 1088 aaKnown RBP11.52□□□□□ -0.57
SMPD4-208ENST00000439029 GPCPD1Q9NPB8 672 aa11.52□□□□□ -0.57
SMPD4-208ENST00000439029 DMDP11532 3685 aa11.52□□□□□ -0.57
SMPD4-208ENST00000439029 FRMPD2Q68DX3 1309 aaPredicted RBP11.52□□□□□ -0.57
SMPD4-208ENST00000439029 RALGAPA2Q2PPJ7 1873 aa11.51□□□□□ -0.57
SMPD4-208ENST00000439029 MYH7P12883 1935 aa11.51□□□□□ -0.57
SMPD4-208ENST00000439029 ZNF316A6NFI3 1004 aaPredicted RBP11.51□□□□□ -0.57
SMPD4-208ENST00000439029 C5orf67F2Z3F1 127 aa11.51□□□□□ -0.57
SMPD4-208ENST00000439029 PLA2G6O60733 806 aa11.51□□□□□ -0.57
SMPD4-208ENST00000439029 GLP2RO95838 553 aa11.51□□□□□ -0.57
SMPD4-208ENST00000439029 RB1P06400 928 aa11.51□□□□□ -0.57
SMPD4-208ENST00000439029 ICAM3P32942 547 aa11.51□□□□□ -0.57
SMPD4-208ENST00000439029 SYDE2Q5VT97 1194 aa11.51□□□□□ -0.57
SMPD4-208ENST00000439029 DGLUCYQ7Z3D6 616 aa11.51□□□□□ -0.57
SMPD4-208ENST00000439029 OSBP2Q969R2 916 aa11.51□□□□□ -0.57
SMPD4-208ENST00000439029 MPHOSPH6Q99547 160 aaKnown RBP11.51□□□□□ -0.57
SMPD4-208ENST00000439029 SMOC2Q9H3U7 446 aa11.51□□□□□ -0.57
SMPD4-208ENST00000439029 ZNF287Q9HBT7 754 aa11.51□□□□□ -0.57
SMPD4-208ENST00000439029 SPTBN2O15020 2390 aa11.5□□□□□ -0.57
SMPD4-208ENST00000439029 LOC102724159A0A0B4J2E5 919 aa11.5□□□□□ -0.57
SMPD4-208ENST00000439029 HAS3O00219 553 aa11.5□□□□□ -0.57
SMPD4-208ENST00000439029 MMP1P03956 469 aa11.5□□□□□ -0.57
SMPD4-208ENST00000439029 RLBP1P12271 317 aa11.5□□□□□ -0.57
SMPD4-208ENST00000439029 ATP5JP18859 108 aa11.5□□□□□ -0.57
SMPD4-208ENST00000439029 COASYQ13057 564 aa11.5□□□□□ -0.57
SMPD4-208ENST00000439029 PWP2Q15269 919 aaKnown RBP11.5□□□□□ -0.57
SMPD4-208ENST00000439029 EFHBQ8N7U6 833 aa11.5□□□□□ -0.57
SMPD4-208ENST00000439029 TBC1D5Q92609 795 aa11.5□□□□□ -0.57
SMPD4-208ENST00000439029 APOL5Q9BWW9 433 aa11.5□□□□□ -0.57
SMPD4-208ENST00000439029 IL17RBQ9NRM6 502 aa11.5□□□□□ -0.57
SMPD4-208ENST00000439029 PLAGL2Q9UPG8 496 aa11.5□□□□□ -0.57
SMPD4-208ENST00000439029 MYO10Q9HD67 2058 aa11.5□□□□□ -0.57
SMPD4-208ENST00000439029 M0R2C6 588 aa11.49□□□□□ -0.57
SMPD4-208ENST00000439029 PER2O15055 1255 aa11.49□□□□□ -0.57
SMPD4-208ENST00000439029 F2P00734 622 aa11.49□□□□□ -0.57
SMPD4-208ENST00000439029 ARP10275 920 aa11.49□□□□□ -0.57
SMPD4-208ENST00000439029 BTG3Q14201 252 aaPredicted RBP11.49□□□□□ -0.57
SMPD4-208ENST00000439029 USH1GQ495M9 461 aa11.49□□□□□ -0.57
SMPD4-208ENST00000439029 ZSCAN25Q6NSZ9 544 aa11.49□□□□□ -0.57
SMPD4-208ENST00000439029 GIMAP6Q6P9H5 292 aa11.49□□□□□ -0.57
SMPD4-208ENST00000439029 SERINC5Q86VE9 423 aa11.49□□□□□ -0.57
SMPD4-208ENST00000439029 FTSJ3Q8IY81 847 aaKnown RBP11.49□□□□□ -0.57
SMPD4-208ENST00000439029 DNERQ8NFT8 737 aa11.49□□□□□ -0.57
SMPD4-208ENST00000439029 KIF1BPQ96EK5 621 aa11.49□□□□□ -0.57
SMPD4-208ENST00000439029 TAAR1Q96RJ0 339 aa11.49□□□□□ -0.57
SMPD4-208ENST00000439029 KATNAL1Q9BW62 490 aa11.49□□□□□ -0.57
SMPD4-208ENST00000439029 DDX41Q9UJV9 622 aaKnown RBP11.49□□□□□ -0.57
SMPD4-208ENST00000439029 ADGRA3Q8IWK6 1321 aa11.49□□□□□ -0.57
SMPD4-208ENST00000439029 PLIN4Q96Q06 1357 aa11.49□□□□□ -0.57
SMPD4-208ENST00000439029 TREHO43280 583 aa11.48□□□□□ -0.57
SMPD4-208ENST00000439029 GPAA1O43292 621 aa11.48□□□□□ -0.57
SMPD4-208ENST00000439029 PPFIA3O75145 1194 aa11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 71.5 ms