RNA–Protein interactions for RNA: ENST00000438594.2

HMGB1P12-201, Transcript of high mobility group box 1 pseudogene 12, humanhuman

BASIC

Gene HMGB1P12, Length 598 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P12-201ENST00000438594 NPHP1O15259 732 aa4.5□□□□□ -1.69
HMGB1P12-201ENST00000438594 PLA2G1BP04054 148 aaKnown RBP4.5□□□□□ -1.69
HMGB1P12-201ENST00000438594 SSBP05455 408 aaKnown RBP eCLIP4.5□□□□□ -1.69
HMGB1P12-201ENST00000438594 IGFBP6P24592 240 aaPredicted RBP4.5□□□□□ -1.69
HMGB1P12-201ENST00000438594 ETFBP38117 255 aa4.5□□□□□ -1.69
HMGB1P12-201ENST00000438594 TRAPPC10P48553 1259 aa4.5□□□□□ -1.69
HMGB1P12-201ENST00000438594 ST13P50502 369 aaKnown RBP4.5□□□□□ -1.69
HMGB1P12-201ENST00000438594 ADAM17P78536 824 aa4.5□□□□□ -1.69
HMGB1P12-201ENST00000438594 SQSTM1Q13501 440 aa4.5□□□□□ -1.69
HMGB1P12-201ENST00000438594 MPP2Q14168 576 aa4.5□□□□□ -1.69
HMGB1P12-201ENST00000438594 VWA3BQ502W6 1294 aa4.5□□□□□ -1.69
HMGB1P12-201ENST00000438594 ACBD5Q5T8D3 534 aaPredicted RBP4.5□□□□□ -1.69
HMGB1P12-201ENST00000438594 REC114Q7Z4M0 266 aa4.5□□□□□ -1.69
HMGB1P12-201ENST00000438594 TTC30BQ8N4P2 665 aa4.5□□□□□ -1.69
HMGB1P12-201ENST00000438594 TEX19Q8NA77 164 aa4.5□□□□□ -1.69
HMGB1P12-201ENST00000438594 SLC16A11Q8NCK7 471 aa4.5□□□□□ -1.69
HMGB1P12-201ENST00000438594 NGDNQ8NEJ9 315 aaKnown RBP4.5□□□□□ -1.69
HMGB1P12-201ENST00000438594 E2F7Q96AV8 911 aa4.5□□□□□ -1.69
HMGB1P12-201ENST00000438594 SEC16BQ96JE7 1060 aa4.5□□□□□ -1.69
HMGB1P12-201ENST00000438594 TMEM74Q96NL1 305 aa4.5□□□□□ -1.69
HMGB1P12-201ENST00000438594 TSPAN18Q96SJ8 248 aa4.5□□□□□ -1.69
HMGB1P12-201ENST00000438594 TRIM55Q9BYV6 548 aa4.5□□□□□ -1.69
HMGB1P12-201ENST00000438594 IFT122Q9HBG6 1241 aa4.5□□□□□ -1.69
HMGB1P12-201ENST00000438594 ZNF69Q9UC07 566 aa4.5□□□□□ -1.69
HMGB1P12-201ENST00000438594 CNOT11Q9UKZ1 510 aaKnown RBP4.5□□□□□ -1.69
HMGB1P12-201ENST00000438594 CTDP1Q9Y5B0 961 aaPredicted RBP4.5□□□□□ -1.69
HMGB1P12-201ENST00000438594 HCFC2Q9Y5Z7 792 aa4.5□□□□□ -1.69
HMGB1P12-201ENST00000438594 GOLGA6CA6NDK9 693 aa4.49□□□□□ -1.69
HMGB1P12-201ENST00000438594 GOLGA6BA6NDN3 693 aa4.49□□□□□ -1.69
HMGB1P12-201ENST00000438594 GSTM1P09488 218 aa4.49□□□□□ -1.69
HMGB1P12-201ENST00000438594 GOLGA6DP0CG33 693 aa4.49□□□□□ -1.69
HMGB1P12-201ENST00000438594 SRGNP10124 158 aa4.49□□□□□ -1.69
HMGB1P12-201ENST00000438594 TNFRSF1AP19438 455 aa4.49□□□□□ -1.69
HMGB1P12-201ENST00000438594 GJA9P57773 515 aa4.49□□□□□ -1.69
HMGB1P12-201ENST00000438594 CAP1Q01518 475 aa4.49□□□□□ -1.69
HMGB1P12-201ENST00000438594 MVKQ03426 396 aa4.49□□□□□ -1.69
HMGB1P12-201ENST00000438594 MCL1Q07820 350 aa4.49□□□□□ -1.69
HMGB1P12-201ENST00000438594 CWF19L2Q2TBE0 894 aaKnown RBP4.49□□□□□ -1.69
HMGB1P12-201ENST00000438594 GRAMD1BQ3KR37 738 aa4.49□□□□□ -1.69
HMGB1P12-201ENST00000438594 DALRD3Q5D0E6 543 aaKnown RBP4.49□□□□□ -1.69
HMGB1P12-201ENST00000438594 OVOS1Q6IE37 1185 aa4.49□□□□□ -1.69
HMGB1P12-201ENST00000438594 ERAP2Q6P179 960 aa4.49□□□□□ -1.69
HMGB1P12-201ENST00000438594 CRTC3Q6UUV7 619 aa4.49□□□□□ -1.69
HMGB1P12-201ENST00000438594 KSR2Q6VAB6 950 aa4.49□□□□□ -1.69
HMGB1P12-201ENST00000438594 MYO1HQ8N1T3 1032 aa4.49□□□□□ -1.69
HMGB1P12-201ENST00000438594 TTC8Q8TAM2 541 aa4.49□□□□□ -1.69
HMGB1P12-201ENST00000438594 HNRNPLLQ8WVV9 542 aaKnown RBP4.49□□□□□ -1.69
HMGB1P12-201ENST00000438594 LOXL4Q96JB6 756 aa4.49□□□□□ -1.69
HMGB1P12-201ENST00000438594 RHOVQ96L33 236 aa4.49□□□□□ -1.69
HMGB1P12-201ENST00000438594 DNAJC7Q99615 494 aa4.49□□□□□ -1.69
HMGB1P12-201ENST00000438594 DSCC1Q9BVC3 393 aa4.49□□□□□ -1.69
HMGB1P12-201ENST00000438594 KRTAP9-8Q9BYQ0 159 aa4.49□□□□□ -1.69
HMGB1P12-201ENST00000438594 ANTXR1Q9H6X2 564 aa4.49□□□□□ -1.69
HMGB1P12-201ENST00000438594 GOLGA6AQ9NYA3 693 aa4.49□□□□□ -1.69
HMGB1P12-201ENST00000438594 GMIPQ9P107 970 aa4.49□□□□□ -1.69
HMGB1P12-201ENST00000438594 PUF60Q9UHX1 559 aaKnown RBP4.49□□□□□ -1.69
HMGB1P12-201ENST00000438594 TAGLN3Q9UI15 199 aa4.49□□□□□ -1.69
HMGB1P12-201ENST00000438594 PLA2G2DQ9UNK4 145 aa4.49□□□□□ -1.69
HMGB1P12-201ENST00000438594 NUB1Q9Y5A7 615 aa4.49□□□□□ -1.69
HMGB1P12-201ENST00000438594 PCDHB14Q9Y5E9 798 aa4.49□□□□□ -1.69
HMGB1P12-201ENST00000438594 PCDHB12Q9Y5F1 795 aa4.49□□□□□ -1.69
HMGB1P12-201ENST00000438594 DUSP10Q9Y6W6 482 aa4.49□□□□□ -1.69
HMGB1P12-201ENST00000438594 IRS2Q9Y4H2 1338 aa4.48□□□□□ -1.69
HMGB1P12-201ENST00000438594 DYTNA2CJ06 578 aa4.48□□□□□ -1.69
HMGB1P12-201ENST00000438594 CCDC85CA6NKD9 419 aa4.48□□□□□ -1.69
HMGB1P12-201ENST00000438594 TTC36A6NLP5 189 aa4.48□□□□□ -1.69
HMGB1P12-201ENST00000438594 F8W031 263 aaPredicted RBP4.48□□□□□ -1.69
HMGB1P12-201ENST00000438594 TCERG1O14776 1098 aaKnown RBP4.48□□□□□ -1.69
HMGB1P12-201ENST00000438594 MATN3O15232 486 aa4.48□□□□□ -1.69
HMGB1P12-201ENST00000438594 ZNF205O95201 554 aa4.48□□□□□ -1.69
HMGB1P12-201ENST00000438594 DBHP09172 617 aa4.48□□□□□ -1.69
HMGB1P12-201ENST00000438594 ATF2P15336 505 aa4.48□□□□□ -1.69
HMGB1P12-201ENST00000438594 VAV1P15498 845 aa4.48□□□□□ -1.69
HMGB1P12-201ENST00000438594 TACR1P25103 407 aa4.48□□□□□ -1.69
HMGB1P12-201ENST00000438594 BMP8BP34820 402 aa4.48□□□□□ -1.69
HMGB1P12-201ENST00000438594 MC3RP41968 323 aa4.48□□□□□ -1.69
HMGB1P12-201ENST00000438594 PWP1Q13610 501 aa4.48□□□□□ -1.69
HMGB1P12-201ENST00000438594 MORC3Q14149 939 aa4.48□□□□□ -1.69
HMGB1P12-201ENST00000438594 LONRF1Q17RB8 773 aa4.48□□□□□ -1.69
HMGB1P12-201ENST00000438594 C1QTNF12Q5T7M4 302 aa4.48□□□□□ -1.69
HMGB1P12-201ENST00000438594 HLA-DQA1Q5Y7H0 255 aa4.48□□□□□ -1.69
HMGB1P12-201ENST00000438594 PAQR3Q6TCH7 311 aa4.48□□□□□ -1.69
HMGB1P12-201ENST00000438594 DDX42Q86XP3 938 aaKnown RBP eCLIP4.48□□□□□ -1.69
HMGB1P12-201ENST00000438594 SPICE1Q8N0Z3 855 aa4.48□□□□□ -1.69
HMGB1P12-201ENST00000438594 BRMS1Q9HCU9 246 aa4.48□□□□□ -1.69
HMGB1P12-201ENST00000438594 MSRB2Q9Y3D2 182 aa4.48□□□□□ -1.69
HMGB1P12-201ENST00000438594 PPP2R3BQ9Y5P8 575 aa4.48□□□□□ -1.69
HMGB1P12-201ENST00000438594 MRVI1Q9Y6F6 885 aa4.48□□□□□ -1.69
HMGB1P12-201ENST00000438594 BICDL2A1A5D9 508 aa4.47□□□□□ -1.69
HMGB1P12-201ENST00000438594 SLC26A4O43511 780 aa4.47□□□□□ -1.69
HMGB1P12-201ENST00000438594 HIP1RO75146 1068 aa4.47□□□□□ -1.69
HMGB1P12-201ENST00000438594 RNASEH2AO75792 299 aaKnown RBP4.47□□□□□ -1.69
HMGB1P12-201ENST00000438594 CYBBP04839 570 aa4.47□□□□□ -1.69
HMGB1P12-201ENST00000438594 CTSKP43235 329 aa4.47□□□□□ -1.69
HMGB1P12-201ENST00000438594 NASPP49321 788 aaPredicted RBP4.47□□□□□ -1.69
HMGB1P12-201ENST00000438594 RAB27AP51159 221 aa4.47□□□□□ -1.69
HMGB1P12-201ENST00000438594 TERF1P54274 439 aa4.47□□□□□ -1.69
HMGB1P12-201ENST00000438594 PRR5P85299 388 aa4.47□□□□□ -1.69
HMGB1P12-201ENST00000438594 FAM83BQ5T0W9 1011 aa4.47□□□□□ -1.69
HMGB1P12-201ENST00000438594 CWF19L1Q69YN2 538 aaKnown RBP4.47□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 58.2 ms