RNA–Protein interactions for RNA: ENST00000437951.5

PTCH1-209, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 8,049 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-209ENST00000437951 POLR2FP61218 127 aaKnown RBP12.42□□□□□ -0.42
PTCH1-209ENST00000437951 THOC5Q13769 683 aaKnown RBP12.42□□□□□ -0.42
PTCH1-209ENST00000437951 TAF1BQ53T94 588 aaPredicted RBP12.42□□□□□ -0.42
PTCH1-209ENST00000437951 TTBK2Q6IQ55 1244 aa12.42□□□□□ -0.42
PTCH1-209ENST00000437951 GDAP1Q8TB36 358 aa12.42□□□□□ -0.42
PTCH1-209ENST00000437951 NLRP3Q96P20 1036 aa12.42□□□□□ -0.42
PTCH1-209ENST00000437951 USP40Q9NVE5 1235 aa12.42□□□□□ -0.42
PTCH1-209ENST00000437951 PPP2R2AP63151 447 aa12.42□□□□□ -0.42
PTCH1-209ENST00000437951 CRYMQ14894 314 aa12.42□□□□□ -0.42
PTCH1-209ENST00000437951 KLHL38Q2WGJ6 581 aa12.42□□□□□ -0.42
PTCH1-209ENST00000437951 EPM2AIP1Q7L775 607 aaPredicted RBP12.42□□□□□ -0.42
PTCH1-209ENST00000437951 AZI2Q9H6S1 392 aa12.42□□□□□ -0.42
PTCH1-209ENST00000437951 HESX1Q9UBX0 185 aa12.42□□□□□ -0.42
PTCH1-209ENST00000437951 COL4A3BPQ9Y5P4 624 aa12.42□□□□□ -0.42
PTCH1-209ENST00000437951 SLC4A7Q9Y6M7 1214 aa12.42□□□□□ -0.42
PTCH1-209ENST00000437951 GRID2IPA4D2P6 1211 aa12.42□□□□□ -0.42
PTCH1-209ENST00000437951 CDH2P19022 906 aaPredicted RBP12.42□□□□□ -0.42
PTCH1-209ENST00000437951 KIF23Q02241 960 aaPredicted RBP12.42□□□□□ -0.42
PTCH1-209ENST00000437951 STX3Q13277 289 aa12.42□□□□□ -0.42
PTCH1-209ENST00000437951 AK8Q96MA6 479 aa12.42□□□□□ -0.42
PTCH1-209ENST00000437951 PARVBQ9HBI1 364 aa12.42□□□□□ -0.42
PTCH1-209ENST00000437951 SERPING1P05155 500 aa12.42□□□□□ -0.42
PTCH1-209ENST00000437951 HLA-DPA1P20036 260 aa12.42□□□□□ -0.42
PTCH1-209ENST00000437951 C2orf54Q08AI8 447 aa12.42□□□□□ -0.42
PTCH1-209ENST00000437951 CEP78Q5JTW2 689 aa12.42□□□□□ -0.42
PTCH1-209ENST00000437951 ZNF555Q8NEP9 628 aa12.42□□□□□ -0.42
PTCH1-209ENST00000437951 FANCLQ9NW38 375 aa12.42□□□□□ -0.42
PTCH1-209ENST00000437951 TARSL2A2RTX5 802 aaKnown RBP12.41□□□□□ -0.42
PTCH1-209ENST00000437951 TMCC1O94876 653 aa12.41□□□□□ -0.42
PTCH1-209ENST00000437951 ADRM1Q16186 407 aa12.41□□□□□ -0.42
PTCH1-209ENST00000437951 FBXO38Q6PIJ6 1188 aa12.41□□□□□ -0.42
PTCH1-209ENST00000437951 PDP2Q9P2J9 529 aa12.41□□□□□ -0.42
PTCH1-209ENST00000437951 V9GY48 417 aaPredicted RBP12.41□□□□□ -0.42
PTCH1-209ENST00000437951 NESP48681 1621 aa12.41□□□□□ -0.42
PTCH1-209ENST00000437951 LAMC3Q9Y6N6 1575 aa12.41□□□□□ -0.42
PTCH1-209ENST00000437951 GOLGA8RI6L899 631 aa12.41□□□□□ -0.42
PTCH1-209ENST00000437951 M0QZ92 97 aa12.41□□□□□ -0.42
PTCH1-209ENST00000437951 CTIFO43310 598 aaKnown RBP12.41□□□□□ -0.42
PTCH1-209ENST00000437951 PICALMQ13492 652 aa12.41□□□□□ -0.42
PTCH1-209ENST00000437951 LMBR1LQ6UX01 489 aa12.41□□□□□ -0.42
PTCH1-209ENST00000437951 LRRIQ3A6PVS8 624 aaPredicted RBP12.41□□□□□ -0.42
PTCH1-209ENST00000437951 CA4P22748 312 aa12.41□□□□□ -0.42
PTCH1-209ENST00000437951 RFX6Q8HWS3 928 aa12.41□□□□□ -0.42
PTCH1-209ENST00000437951 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP12.41□□□□□ -0.423e-6■■■■■ 50.8
PTCH1-209ENST00000437951 ABCF3Q9NUQ8 709 aa12.41□□□□□ -0.42
PTCH1-209ENST00000437951 MAGI1Q96QZ7 1491 aaPredicted RBP12.41□□□□□ -0.42
PTCH1-209ENST00000437951 WASLO00401 505 aaPredicted RBP12.41□□□□□ -0.42
PTCH1-209ENST00000437951 NOP56O00567 594 aaKnown RBP12.41□□□□□ -0.42
PTCH1-209ENST00000437951 HAUS5O94927 633 aa12.41□□□□□ -0.42
PTCH1-209ENST00000437951 HSPA4LO95757 839 aa12.41□□□□□ -0.42
PTCH1-209ENST00000437951 TLK2Q86UE8 772 aa12.41□□□□□ -0.42
PTCH1-209ENST00000437951 ELAC2Q9BQ52 826 aaKnown RBP12.41□□□□□ -0.42
PTCH1-209ENST00000437951 GCOM2Q9BZD3 368 aaPredicted RBP12.41□□□□□ -0.42
PTCH1-209ENST00000437951 ASCC2Q9H1I8 757 aaPredicted RBP12.41□□□□□ -0.42
PTCH1-209ENST00000437951 PLAAQ9Y263 795 aa12.41□□□□□ -0.42
PTCH1-209ENST00000437951 KIF19Q2TAC6 998 aa12.41□□□□□ -0.42
PTCH1-209ENST00000437951 TMEM259Q4ZIN3 620 aa12.41□□□□□ -0.42
PTCH1-209ENST00000437951 PLD3Q8IV08 490 aa12.41□□□□□ -0.42
PTCH1-209ENST00000437951 PDIK1LQ8N165 341 aa12.41□□□□□ -0.42
PTCH1-209ENST00000437951 PBXIP1Q96AQ6 731 aa12.41□□□□□ -0.42
PTCH1-209ENST00000437951 IVNS1ABPQ9Y6Y0 642 aa12.41□□□□□ -0.42
PTCH1-209ENST00000437951 ZMYM6O95789 1325 aa12.41□□□□□ -0.42
PTCH1-209ENST00000437951 RNF103-CHMP3A0A140T963 221 aa12.41□□□□□ -0.42
PTCH1-209ENST00000437951 CFLARO15519 480 aa12.41□□□□□ -0.42
PTCH1-209ENST00000437951 KRT38O76015 456 aa12.41□□□□□ -0.42
PTCH1-209ENST00000437951 PPARDQ03181 441 aa12.41□□□□□ -0.42
PTCH1-209ENST00000437951 GPBP1Q86WP2 473 aa12.41□□□□□ -0.42
PTCH1-209ENST00000437951 NCAPG2Q86XI2 1143 aa12.41□□□□□ -0.42
PTCH1-209ENST00000437951 GINS4Q9BRT9 223 aa12.41□□□□□ -0.42
PTCH1-209ENST00000437951 SLC38A10Q9HBR0 1119 aa12.41□□□□□ -0.42
PTCH1-209ENST00000437951 DNAJC6O75061 913 aa12.41□□□□□ -0.42
PTCH1-209ENST00000437951 KRT19P08727 400 aa12.41□□□□□ -0.42
PTCH1-209ENST00000437951 MAPK4P31152 587 aa12.41□□□□□ -0.42
PTCH1-209ENST00000437951 HSPA9P38646 679 aaKnown RBP12.41□□□□□ -0.42
PTCH1-209ENST00000437951 TFCP2Q12800 502 aa12.41□□□□□ -0.42
PTCH1-209ENST00000437951 KAZNQ674X7 775 aa12.41□□□□□ -0.42
PTCH1-209ENST00000437951 ANKRD27Q96NW4 1050 aa12.41□□□□□ -0.42
PTCH1-209ENST00000437951 ABCB6Q9NP58 842 aa12.41□□□□□ -0.42
PTCH1-209ENST00000437951 ATP8A2Q9NTI2 1148 aa12.41□□□□□ -0.42
PTCH1-209ENST00000437951 ABCC12Q96J65 1359 aa12.4□□□□□ -0.42
PTCH1-209ENST00000437951 SAT1P21673 171 aa12.4□□□□□ -0.42
PTCH1-209ENST00000437951 MYO1EQ12965 1108 aa12.4□□□□□ -0.42
PTCH1-209ENST00000437951 DTX3LQ8TDB6 740 aa12.4□□□□□ -0.42
PTCH1-209ENST00000437951 TUBGCP2Q9BSJ2 902 aa12.4□□□□□ -0.42
PTCH1-209ENST00000437951 ATG3Q9NT62 314 aa12.4□□□□□ -0.42
PTCH1-209ENST00000437951 ARL2BPQ9Y2Y0 163 aa12.4□□□□□ -0.42
PTCH1-209ENST00000437951 MEIS1O00470 390 aa12.4□□□□□ -0.42
PTCH1-209ENST00000437951 MED7O43513 233 aa12.4□□□□□ -0.42
PTCH1-209ENST00000437951 PCP11498 1178 aaKnown RBP12.4□□□□□ -0.42
PTCH1-209ENST00000437951 CASP14P31944 242 aa12.4□□□□□ -0.42
PTCH1-209ENST00000437951 YARSP54577 528 aaKnown RBP12.4□□□□□ -0.42
PTCH1-209ENST00000437951 MYL7Q01449 175 aa12.4□□□□□ -0.42
PTCH1-209ENST00000437951 DMP1Q13316 513 aaPredicted RBP12.4□□□□□ -0.42
PTCH1-209ENST00000437951 BEND6Q5SZJ8 279 aaPredicted RBP12.4□□□□□ -0.42
PTCH1-209ENST00000437951 TRIM67Q6ZTA4 783 aa12.4□□□□□ -0.42
PTCH1-209ENST00000437951 OTUB1Q96FW1 271 aaPredicted RBP12.4□□□□□ -0.42
PTCH1-209ENST00000437951 PYCARDQ9ULZ3 195 aa12.4□□□□□ -0.42
PTCH1-209ENST00000437951 TRAPPC10P48553 1259 aa12.4□□□□□ -0.42
PTCH1-209ENST00000437951 AKAP4Q5JQC9 854 aa12.4□□□□□ -0.42
PTCH1-209ENST00000437951 POTEAQ6S8J7 498 aa12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 60.2 ms