RNA–Protein interactions for RNA: ENST00000437516.1

HLA-N-201, Transcript of major histocompatibility complex, class I, N (pseudogene), humanhuman

BASIC

Gene HLA-N, Length 135 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-N-201ENST00000437516 LSM14BQ9BX40 385 aaKnown RBP4.74□□□□□ -1.65
HLA-N-201ENST00000437516 RAB34Q9BZG1 259 aa4.74□□□□□ -1.65
HLA-N-201ENST00000437516 NYXQ9GZU5 481 aa4.74□□□□□ -1.65
HLA-N-201ENST00000437516 EPN3Q9H201 632 aa4.74□□□□□ -1.65
HLA-N-201ENST00000437516 RIOX1Q9H6W3 641 aa4.74□□□□□ -1.65
HLA-N-201ENST00000437516 TMBIM4Q9HC24 238 aa4.74□□□□□ -1.65
HLA-N-201ENST00000437516 EPB41L5Q9HCM4 733 aa4.74□□□□□ -1.65
HLA-N-201ENST00000437516 FAM207AQ9NSI2 230 aaPredicted RBP4.74□□□□□ -1.65
HLA-N-201ENST00000437516 RBM12Q9NTZ6 932 aaKnown RBP4.74□□□□□ -1.65
HLA-N-201ENST00000437516 TFCP2L1Q9NZI6 479 aa4.74□□□□□ -1.65
HLA-N-201ENST00000437516 EHD2Q9NZN4 543 aa4.74□□□□□ -1.65
HLA-N-201ENST00000437516 SEC63Q9UGP8 760 aaKnown RBP4.74□□□□□ -1.65
HLA-N-201ENST00000437516 SALL4Q9UJQ4 1053 aa4.74□□□□□ -1.65
HLA-N-201ENST00000437516 ATP6V0A2Q9Y487 856 aa4.74□□□□□ -1.65
HLA-N-201ENST00000437516 COL4A3BPQ9Y5P4 624 aa4.74□□□□□ -1.65
HLA-N-201ENST00000437516 CACNA1SQ13698 1873 aa4.74□□□□□ -1.65
HLA-N-201ENST00000437516 COL4A1P02462 1669 aa4.73□□□□□ -1.65
HLA-N-201ENST00000437516 ATP8B3O60423 1300 aa4.73□□□□□ -1.65
HLA-N-201ENST00000437516 IRS2Q9Y4H2 1338 aa4.73□□□□□ -1.65
HLA-N-201ENST00000437516 CASZ1Q86V15 1759 aa4.73□□□□□ -1.65
HLA-N-201ENST00000437516 PHLPP1O60346 1717 aa4.73□□□□□ -1.65
HLA-N-201ENST00000437516 KIAA1551Q9HCM1 1747 aa4.73□□□□□ -1.65
HLA-N-201ENST00000437516 NDUFAB1O14561 156 aa4.73□□□□□ -1.65
HLA-N-201ENST00000437516 NKRFO15226 690 aaKnown RBP eCLIP4.73□□□□□ -1.65
HLA-N-201ENST00000437516 MEFVO15553 781 aaPredicted RBP4.73□□□□□ -1.65
HLA-N-201ENST00000437516 PALMO75781 387 aa4.73□□□□□ -1.65
HLA-N-201ENST00000437516 PPP1R37O75864 691 aa4.73□□□□□ -1.65
HLA-N-201ENST00000437516 NOL4O94818 638 aa4.73□□□□□ -1.65
HLA-N-201ENST00000437516 GLI1P08151 1106 aa4.73□□□□□ -1.65
HLA-N-201ENST00000437516 FAM153BP0C7A2 387 aa4.73□□□□□ -1.65
HLA-N-201ENST00000437516 GOLGA8HP0CJ92 632 aa4.73□□□□□ -1.65
HLA-N-201ENST00000437516 NR1D1P20393 614 aa4.73□□□□□ -1.65
HLA-N-201ENST00000437516 KLRC1P26715 233 aa4.73□□□□□ -1.65
HLA-N-201ENST00000437516 HNRNPH1P31943 449 aaKnown RBP4.73□□□□□ -1.65
HLA-N-201ENST00000437516 CXCR5P32302 372 aa4.73□□□□□ -1.65
HLA-N-201ENST00000437516 MDH1P40925 334 aaKnown RBP4.73□□□□□ -1.65
HLA-N-201ENST00000437516 SLC1A4P43007 532 aa4.73□□□□□ -1.65
HLA-N-201ENST00000437516 CDK8P49336 464 aa4.73□□□□□ -1.65
HLA-N-201ENST00000437516 FNTAP49354 379 aa4.73□□□□□ -1.65
HLA-N-201ENST00000437516 IRX3P78415 501 aaPredicted RBP4.73□□□□□ -1.65
HLA-N-201ENST00000437516 SETQ01105 290 aaPredicted RBP4.73□□□□□ -1.65
HLA-N-201ENST00000437516 GUCY2DQ02846 1103 aa4.73□□□□□ -1.65
HLA-N-201ENST00000437516 GFPT1Q06210 699 aaPredicted RBP4.73□□□□□ -1.65
HLA-N-201ENST00000437516 DDR1Q08345 913 aa4.73□□□□□ -1.65
HLA-N-201ENST00000437516 KLHL30Q0D2K2 578 aa4.73□□□□□ -1.65
HLA-N-201ENST00000437516 COASYQ13057 564 aa4.73□□□□□ -1.65
HLA-N-201ENST00000437516 PDCLQ13371 301 aa4.73□□□□□ -1.65
HLA-N-201ENST00000437516 DRP2Q13474 957 aa4.73□□□□□ -1.65
HLA-N-201ENST00000437516 SLC18A3Q16572 532 aa4.73□□□□□ -1.65
HLA-N-201ENST00000437516 PTGISQ16647 500 aa4.73□□□□□ -1.65
HLA-N-201ENST00000437516 IFI16Q16666 785 aaKnown RBP4.73□□□□□ -1.65
HLA-N-201ENST00000437516 SKIDA1Q1XH10 827 aa4.73□□□□□ -1.65
HLA-N-201ENST00000437516 FAM153CQ494X1 144 aa4.73□□□□□ -1.65
HLA-N-201ENST00000437516 ZCWPW2Q504Y3 356 aa4.73□□□□□ -1.65
HLA-N-201ENST00000437516 HYIQ5T013 277 aa4.73□□□□□ -1.65
HLA-N-201ENST00000437516 FAM83BQ5T0W9 1011 aa4.73□□□□□ -1.65
HLA-N-201ENST00000437516 KRT79Q5XKE5 535 aa4.73□□□□□ -1.65
HLA-N-201ENST00000437516 PPP1R18Q6NYC8 613 aa4.73□□□□□ -1.65
HLA-N-201ENST00000437516 LRRC55Q6ZSA7 311 aa4.73□□□□□ -1.65
HLA-N-201ENST00000437516 PPP1R3FQ6ZSY5 799 aaPredicted RBP4.73□□□□□ -1.65
HLA-N-201ENST00000437516 C16orf86Q6ZW13 317 aa4.73□□□□□ -1.65
HLA-N-201ENST00000437516 DYMQ7RTS9 669 aa4.73□□□□□ -1.65
HLA-N-201ENST00000437516 CCDC91Q7Z6B0 441 aa4.73□□□□□ -1.65
HLA-N-201ENST00000437516 RPAINQ86UA6 219 aa4.73□□□□□ -1.65
HLA-N-201ENST00000437516 CCDC65Q8IXS2 484 aa4.73□□□□□ -1.65
HLA-N-201ENST00000437516 ZC3H3Q8IXZ2 948 aaKnown RBP4.73□□□□□ -1.65
HLA-N-201ENST00000437516 MYOCDQ8IZQ8 938 aa4.73□□□□□ -1.65
HLA-N-201ENST00000437516 ANKRD13CQ8N6S4 541 aa4.73□□□□□ -1.65
HLA-N-201ENST00000437516 PRPF38AQ8NAV1 312 aaKnown RBP4.73□□□□□ -1.65
HLA-N-201ENST00000437516 USP38Q8NB14 1042 aa4.73□□□□□ -1.65
HLA-N-201ENST00000437516 C3orf20Q8ND61 904 aa4.73□□□□□ -1.65
HLA-N-201ENST00000437516 SH3RF3Q8TEJ3 882 aaPredicted RBP4.73□□□□□ -1.65
HLA-N-201ENST00000437516 SNX29Q8TEQ0 813 aa4.73□□□□□ -1.65
HLA-N-201ENST00000437516 SCFD2Q8WU76 684 aa4.73□□□□□ -1.65
HLA-N-201ENST00000437516 IFT81Q8WYA0 676 aa4.73□□□□□ -1.65
HLA-N-201ENST00000437516 DDX12PQ92771 950 aa4.73□□□□□ -1.65
HLA-N-201ENST00000437516 HPS3Q969F9 1004 aa4.73□□□□□ -1.65
HLA-N-201ENST00000437516 LRRC45Q96CN5 670 aa4.73□□□□□ -1.65
HLA-N-201ENST00000437516 ACSBG1Q96GR2 724 aa4.73□□□□□ -1.65
HLA-N-201ENST00000437516 MS4A14Q96JA4 679 aa4.73□□□□□ -1.65
HLA-N-201ENST00000437516 CALR3Q96L12 384 aaKnown RBP4.73□□□□□ -1.65
HLA-N-201ENST00000437516 RNPC3Q96LT9 517 aaKnown RBP4.73□□□□□ -1.65
HLA-N-201ENST00000437516 INPP4AQ96PE3 977 aaPredicted RBP4.73□□□□□ -1.65
HLA-N-201ENST00000437516 PIGSQ96S52 555 aa4.73□□□□□ -1.65
HLA-N-201ENST00000437516 KRT12Q99456 494 aa4.73□□□□□ -1.65
HLA-N-201ENST00000437516 NAP1L4Q99733 375 aaKnown RBP4.73□□□□□ -1.65
HLA-N-201ENST00000437516 TANGO6Q9C0B7 1094 aa4.73□□□□□ -1.65
HLA-N-201ENST00000437516 NT5C3AQ9H0P0 336 aa4.73□□□□□ -1.65
HLA-N-201ENST00000437516 ISCUQ9H1K1 167 aa4.73□□□□□ -1.65
HLA-N-201ENST00000437516 EHD4Q9H223 541 aa4.73□□□□□ -1.65
HLA-N-201ENST00000437516 GANQ9H2C0 597 aa4.73□□□□□ -1.65
HLA-N-201ENST00000437516 TAF1DQ9H5J8 278 aaPredicted RBP4.73□□□□□ -1.65
HLA-N-201ENST00000437516 NLRC4Q9NPP4 1024 aa4.73□□□□□ -1.65
HLA-N-201ENST00000437516 PLCB1Q9NQ66 1216 aa4.73□□□□□ -1.65
HLA-N-201ENST00000437516 BMP2KQ9NSY1 1161 aaPredicted RBP4.73□□□□□ -1.65
HLA-N-201ENST00000437516 PANK4Q9NVE7 773 aa4.73□□□□□ -1.65
HLA-N-201ENST00000437516 TMEM260Q9NX78 707 aa4.73□□□□□ -1.65
HLA-N-201ENST00000437516 SMARCAL1Q9NZC9 954 aa4.73□□□□□ -1.65
HLA-N-201ENST00000437516 AIPL1Q9NZN9 384 aa4.73□□□□□ -1.65
HLA-N-201ENST00000437516 BIN2Q9UBW5 565 aaPredicted RBP4.73□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms