RNA–Protein interactions for RNA: ENST00000436601.1

LSM3P3-201, Transcript of LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated pseudogene 3, humanhuman

BASIC

Gene LSM3P3, Length 306 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3P3-201ENST00000436601 TRAF1Q13077 416 aa8.04□□□□□ -1.12
LSM3P3-201ENST00000436601 GNL2Q13823 731 aaKnown RBP8.04□□□□□ -1.12
LSM3P3-201ENST00000436601 CCL15Q16663 113 aa8.04□□□□□ -1.12
LSM3P3-201ENST00000436601 UBE2SQ16763 222 aa8.04□□□□□ -1.12
LSM3P3-201ENST00000436601 PTCRAQ6ISU1 281 aaPredicted RBP8.04□□□□□ -1.12
LSM3P3-201ENST00000436601 LBX2Q6XYB7 198 aa8.04□□□□□ -1.12
LSM3P3-201ENST00000436601 PIK3AP1Q6ZUJ8 805 aa8.04□□□□□ -1.12
LSM3P3-201ENST00000436601 ANKRD23Q86SG2 305 aa8.04□□□□□ -1.12
LSM3P3-201ENST00000436601 FAM43AQ8N2R8 423 aa8.04□□□□□ -1.12
LSM3P3-201ENST00000436601 TBC1D5Q92609 795 aa8.04□□□□□ -1.12
LSM3P3-201ENST00000436601 HHIPL1Q96JK4 782 aa8.04□□□□□ -1.12
LSM3P3-201ENST00000436601 FTOQ9C0B1 505 aaKnown RBP eCLIP8.04□□□□□ -1.12
LSM3P3-201ENST00000436601 BRMS1Q9HCU9 246 aa8.04□□□□□ -1.12
LSM3P3-201ENST00000436601 BTBD7Q9P203 1132 aa8.04□□□□□ -1.12
LSM3P3-201ENST00000436601 BIN2Q9UBW5 565 aaPredicted RBP8.04□□□□□ -1.12
LSM3P3-201ENST00000436601 ZNF214Q9UL59 606 aaPredicted RBP8.04□□□□□ -1.12
LSM3P3-201ENST00000436601 CCPG1Q9ULG6 757 aa8.04□□□□□ -1.12
LSM3P3-201ENST00000436601 ABT1Q9ULW3 272 aaKnown RBP8.04□□□□□ -1.12
LSM3P3-201ENST00000436601 SLC45A1Q9Y2W3 748 aa8.04□□□□□ -1.12
LSM3P3-201ENST00000436601 OTOFQ9HC10 1997 aa8.04□□□□□ -1.12
LSM3P3-201ENST00000436601 ABCB11O95342 1321 aa8.03□□□□□ -1.12
LSM3P3-201ENST00000436601 PHIPQ8WWQ0 1821 aa8.03□□□□□ -1.12
LSM3P3-201ENST00000436601 POLR2AP24928 1970 aaKnown RBP8.03□□□□□ -1.12
LSM3P3-201ENST00000436601 WNT7AO00755 349 aa8.03□□□□□ -1.12
LSM3P3-201ENST00000436601 EDIL3O43854 480 aa8.03□□□□□ -1.12
LSM3P3-201ENST00000436601 CYP2C8P10632 490 aa8.03□□□□□ -1.12
LSM3P3-201ENST00000436601 ALAS1P13196 640 aa8.03□□□□□ -1.12
LSM3P3-201ENST00000436601 MCM4P33991 863 aa8.03□□□□□ -1.12
LSM3P3-201ENST00000436601 HERVK_113P62684 666 aa8.03□□□□□ -1.12
LSM3P3-201ENST00000436601 IRX3P78415 501 aaPredicted RBP8.03□□□□□ -1.12
LSM3P3-201ENST00000436601 PABPC4Q13310 644 aaKnown RBP eCLIP8.03□□□□□ -1.12
LSM3P3-201ENST00000436601 NBPF20Q3BBV1 942 aa8.03□□□□□ -1.12
LSM3P3-201ENST00000436601 MUM1L1Q5H9M0 696 aa8.03□□□□□ -1.12
LSM3P3-201ENST00000436601 JAKMIP3Q5VZ66 844 aa8.03□□□□□ -1.12
LSM3P3-201ENST00000436601 ATL3Q6DD88 541 aa8.03□□□□□ -1.12
LSM3P3-201ENST00000436601 USP17L6PQ6QN14 398 aa8.03□□□□□ -1.12
LSM3P3-201ENST00000436601 REXO1Q8N1G1 1221 aaKnown RBP8.03□□□□□ -1.12
LSM3P3-201ENST00000436601 BICD2Q8TD16 824 aa8.03□□□□□ -1.12
LSM3P3-201ENST00000436601 CUL5Q93034 780 aa8.03□□□□□ -1.12
LSM3P3-201ENST00000436601 GBP4Q96PP9 640 aa8.03□□□□□ -1.12
LSM3P3-201ENST00000436601 USP28Q96RU2 1077 aa8.03□□□□□ -1.12
LSM3P3-201ENST00000436601 MTRQ99707 1265 aa8.03□□□□□ -1.12
LSM3P3-201ENST00000436601 IL21Q9HBE4 155 aa8.03□□□□□ -1.12
LSM3P3-201ENST00000436601 TXNRD2Q9NNW7 524 aa8.03□□□□□ -1.12
LSM3P3-201ENST00000436601 RBPJLQ9UBG7 517 aa8.03□□□□□ -1.12
LSM3P3-201ENST00000436601 CDV3Q9UKY7 258 aaKnown RBP8.03□□□□□ -1.12
LSM3P3-201ENST00000436601 PNMA2Q9UL42 364 aa8.03□□□□□ -1.12
LSM3P3-201ENST00000436601 MRPL11Q9Y3B7 192 aaKnown RBP8.03□□□□□ -1.12
LSM3P3-201ENST00000436601 CTDP1Q9Y5B0 961 aaPredicted RBP8.03□□□□□ -1.12
LSM3P3-201ENST00000436601 CLIC4Q9Y696 253 aa8.03□□□□□ -1.12
LSM3P3-201ENST00000436601 MYH8P13535 1937 aa8.03□□□□□ -1.12
LSM3P3-201ENST00000436601 ATAD5Q96QE3 1844 aa8.03□□□□□ -1.12
LSM3P3-201ENST00000436601 CCDC194A0A1B0GVG4 234 aa8.02□□□□□ -1.13
LSM3P3-201ENST00000436601 MANSC4A6NHS7 340 aaPredicted RBP8.02□□□□□ -1.13
LSM3P3-201ENST00000436601 SOWAHDA6NJG2 315 aa8.02□□□□□ -1.13
LSM3P3-201ENST00000436601 IGF2BP3O00425 579 aaKnown RBP eCLIP8.02□□□□□ -1.13
LSM3P3-201ENST00000436601 NFIBO00712 420 aa8.02□□□□□ -1.13
LSM3P3-201ENST00000436601 DKK1O94907 266 aa8.02□□□□□ -1.13
LSM3P3-201ENST00000436601 NCLP19338 710 aaKnown RBP8.02□□□□□ -1.13
LSM3P3-201ENST00000436601 HOXA13P31271 388 aaPredicted RBP8.02□□□□□ -1.13
LSM3P3-201ENST00000436601 STAT3P40763 770 aa8.02□□□□□ -1.13
LSM3P3-201ENST00000436601 HSD17B4P51659 736 aa8.02□□□□□ -1.13
LSM3P3-201ENST00000436601 SEC13P55735 322 aa8.02□□□□□ -1.13
LSM3P3-201ENST00000436601 KRT85P78386 507 aa8.02□□□□□ -1.13
LSM3P3-201ENST00000436601 GHRHRQ02643 423 aa8.02□□□□□ -1.13
LSM3P3-201ENST00000436601 CEBPZQ03701 1054 aaKnown RBP8.02□□□□□ -1.13
LSM3P3-201ENST00000436601 NONOQ15233 471 aaKnown RBP eCLIP8.02□□□□□ -1.13
LSM3P3-201ENST00000436601 PTPAQ15257 358 aa8.02□□□□□ -1.13
LSM3P3-201ENST00000436601 NFKBIBQ15653 356 aa8.02□□□□□ -1.13
LSM3P3-201ENST00000436601 INF2Q27J81 1249 aa8.02□□□□□ -1.13
LSM3P3-201ENST00000436601 OXLD1Q5BKU9 147 aa8.02□□□□□ -1.13
LSM3P3-201ENST00000436601 RILPL1Q5EBL4 403 aa8.02□□□□□ -1.13
LSM3P3-201ENST00000436601 ANO1Q5XXA6 986 aa8.02□□□□□ -1.13
LSM3P3-201ENST00000436601 SNRNP48Q6IEG0 339 aaKnown RBP8.02□□□□□ -1.13
LSM3P3-201ENST00000436601 KRT25Q7Z3Z0 450 aa8.02□□□□□ -1.13
LSM3P3-201ENST00000436601 TEX2Q8IWB9 1127 aa8.02□□□□□ -1.13
LSM3P3-201ENST00000436601 MB21D1Q8N884 522 aa8.02□□□□□ -1.13
LSM3P3-201ENST00000436601 LEO1Q8WVC0 666 aaPredicted RBP8.02□□□□□ -1.13
LSM3P3-201ENST00000436601 PGBD1Q96JS3 809 aa8.02□□□□□ -1.13
LSM3P3-201ENST00000436601 ZNF396Q96N95 335 aaPredicted RBP8.02□□□□□ -1.13
LSM3P3-201ENST00000436601 TRERF1Q96PN7 1200 aa8.02□□□□□ -1.13
LSM3P3-201ENST00000436601 ZIC5Q96T25 663 aa8.02□□□□□ -1.13
LSM3P3-201ENST00000436601 TEX13BQ9BXU2 312 aa8.02□□□□□ -1.13
LSM3P3-201ENST00000436601 GLT8D2Q9H1C3 349 aa8.02□□□□□ -1.13
LSM3P3-201ENST00000436601 R3HDMLQ9H3Y0 253 aa8.02□□□□□ -1.13
LSM3P3-201ENST00000436601 HOMER2Q9NSB8 354 aa8.02□□□□□ -1.13
LSM3P3-201ENST00000436601 RTEL1Q9NZ71 1219 aa8.02□□□□□ -1.13
LSM3P3-201ENST00000436601 RCOR1Q9UKL0 485 aa8.02□□□□□ -1.13
LSM3P3-201ENST00000436601 CFAP45Q9UL16 551 aa8.02□□□□□ -1.13
LSM3P3-201ENST00000436601 PCDHB6Q9Y5E3 794 aa8.02□□□□□ -1.13
LSM3P3-201ENST00000436601 MYH4Q9Y623 1939 aa8.01□□□□□ -1.13
LSM3P3-201ENST00000436601 GCOM1H8Y6P7 765 aaPredicted RBP8.01□□□□□ -1.13
LSM3P3-201ENST00000436601 FIBPO43427 364 aa8.01□□□□□ -1.13
LSM3P3-201ENST00000436601 PRPF40AO75400 957 aaKnown RBP8.01□□□□□ -1.13
LSM3P3-201ENST00000436601 CFBP00751 764 aa8.01□□□□□ -1.13
LSM3P3-201ENST00000436601 POLR2MP0CAP2 368 aa8.01□□□□□ -1.13
LSM3P3-201ENST00000436601 ATP2B1P20020 1258 aa8.01□□□□□ -1.13
LSM3P3-201ENST00000436601 TRAPPC10P48553 1259 aa8.01□□□□□ -1.13
LSM3P3-201ENST00000436601 NASPP49321 788 aaPredicted RBP8.01□□□□□ -1.13
LSM3P3-201ENST00000436601 PLS1Q14651 629 aa8.01□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms