RNA–Protein interactions for RNA: ENST00000433972.1

RPUSD3-208, Transcript of RNA pseudouridylate synthase domain containing 3, humanhuman

TSL 2

Gene RPUSD3, Length 1,178 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3-208ENST00000433972 TLL1O43897 1013 aa17.2■□□□□ 0.34
RPUSD3-208ENST00000433972 PPP1R11O60927 126 aaPredicted RBP17.2■□□□□ 0.34
RPUSD3-208ENST00000433972 GGPS1O95749 300 aa17.2■□□□□ 0.34
RPUSD3-208ENST00000433972 CKBP12277 381 aa17.2■□□□□ 0.34
RPUSD3-208ENST00000433972 MYOGP15173 224 aa17.2■□□□□ 0.34
RPUSD3-208ENST00000433972 POU3F3P20264 500 aaPredicted RBP17.2■□□□□ 0.34
RPUSD3-208ENST00000433972 HOXA13P31271 388 aaPredicted RBP17.2■□□□□ 0.34
RPUSD3-208ENST00000433972 TROAPQ12815 778 aa17.2■□□□□ 0.34
RPUSD3-208ENST00000433972 CCDC85BQ15834 202 aaPredicted RBP17.2■□□□□ 0.34
RPUSD3-208ENST00000433972 CTCFLQ8NI51 663 aaPredicted RBP17.2■□□□□ 0.34
RPUSD3-208ENST00000433972 PPP1R13LQ8WUF5 828 aa17.2■□□□□ 0.34
RPUSD3-208ENST00000433972 PIGSQ96S52 555 aa17.2■□□□□ 0.34
RPUSD3-208ENST00000433972 EMSYQ7Z589 1322 aa17.2■□□□□ 0.34
RPUSD3-208ENST00000433972 ABHD14A-ACY1A0A1B0GW23 586 aa17.19■□□□□ 0.34
RPUSD3-208ENST00000433972 TNFRSF10AO00220 468 aa17.19■□□□□ 0.34
RPUSD3-208ENST00000433972 NOP56O00567 594 aaKnown RBP17.19■□□□□ 0.34
RPUSD3-208ENST00000433972 CXCL10P02778 98 aa17.19■□□□□ 0.34
RPUSD3-208ENST00000433972 ZNF286BP0CG31 522 aa17.19■□□□□ 0.34
RPUSD3-208ENST00000433972 GNAQP50148 359 aa17.19■□□□□ 0.34
RPUSD3-208ENST00000433972 PTH1RQ03431 593 aa17.19■□□□□ 0.34
RPUSD3-208ENST00000433972 NEDD9Q14511 834 aa17.19■□□□□ 0.34
RPUSD3-208ENST00000433972 FCHSD1Q86WN1 690 aa17.19■□□□□ 0.34
RPUSD3-208ENST00000433972 TMTC2Q8N394 836 aa17.19■□□□□ 0.34
RPUSD3-208ENST00000433972 MICALL1Q8N3F8 863 aa17.19■□□□□ 0.34
RPUSD3-208ENST00000433972 CUL5Q93034 780 aa17.19■□□□□ 0.34
RPUSD3-208ENST00000433972 LZTS2Q9BRK4 669 aa17.19■□□□□ 0.34
RPUSD3-208ENST00000433972 ZBED2Q9BTP6 218 aa17.19■□□□□ 0.34
RPUSD3-208ENST00000433972 SEC63Q9UGP8 760 aaKnown RBP17.19■□□□□ 0.34
RPUSD3-208ENST00000433972 CHD9Q3L8U1 2897 aa17.18■□□□□ 0.34
RPUSD3-208ENST00000433972 DDAH1O94760 285 aa17.18■□□□□ 0.34
RPUSD3-208ENST00000433972 UBA1P22314 1058 aaKnown RBP17.18■□□□□ 0.34
RPUSD3-208ENST00000433972 SMARCA1P28370 1054 aa17.18■□□□□ 0.34
RPUSD3-208ENST00000433972 WDR5P61964 334 aaKnown RBP17.18■□□□□ 0.34
RPUSD3-208ENST00000433972 IKBKEQ14164 716 aa17.18■□□□□ 0.34
RPUSD3-208ENST00000433972 SKIV2LQ15477 1246 aaKnown RBP17.18■□□□□ 0.34
RPUSD3-208ENST00000433972 HSDL1Q3SXM5 330 aa17.18■□□□□ 0.34
RPUSD3-208ENST00000433972 XRRA1Q6P2D8 792 aa17.18■□□□□ 0.34
RPUSD3-208ENST00000433972 MAP4K1Q92918 833 aa17.18■□□□□ 0.34
RPUSD3-208ENST00000433972 RRP36Q96EU6 259 aaKnown RBP17.18■□□□□ 0.34
RPUSD3-208ENST00000433972 CTAGE1Q96RT6 745 aa17.18■□□□□ 0.34
RPUSD3-208ENST00000433972 SPZ1Q9BXG8 430 aa17.18■□□□□ 0.34
RPUSD3-208ENST00000433972 PRDM6Q9NQX0 595 aa17.18■□□□□ 0.34
RPUSD3-208ENST00000433972 TANC1Q9C0D5 1861 aa17.18■□□□□ 0.34
RPUSD3-208ENST00000433972 RGS20O76081 388 aa17.17■□□□□ 0.34
RPUSD3-208ENST00000433972 GNAT1P11488 350 aa17.17■□□□□ 0.34
RPUSD3-208ENST00000433972 SKAP1Q86WV1 359 aa17.17■□□□□ 0.34
RPUSD3-208ENST00000433972 ARNTL2Q8WYA1 636 aa17.17■□□□□ 0.34
RPUSD3-208ENST00000433972 DHX38Q92620 1227 aaKnown RBP17.17■□□□□ 0.34
RPUSD3-208ENST00000433972 USP26Q9BXU7 913 aa17.17■□□□□ 0.34
RPUSD3-208ENST00000433972 FRMPD4Q14CM0 1322 aa17.17■□□□□ 0.34
RPUSD3-208ENST00000433972 C17orf102A2RUQ5 167 aa17.16■□□□□ 0.34
RPUSD3-208ENST00000433972 H3BRB1 525 aa17.16■□□□□ 0.34
RPUSD3-208ENST00000433972 FIBPO43427 364 aa17.16■□□□□ 0.34
RPUSD3-208ENST00000433972 CYTH3O43739 400 aa17.16■□□□□ 0.34
RPUSD3-208ENST00000433972 CAND2O75155 1236 aa17.16■□□□□ 0.34
RPUSD3-208ENST00000433972 CDC45O75419 566 aa17.16■□□□□ 0.34
RPUSD3-208ENST00000433972 CALM1P0DP23 149 aa17.16■□□□□ 0.34
RPUSD3-208ENST00000433972 CALM2P0DP24 149 aa17.16■□□□□ 0.34
RPUSD3-208ENST00000433972 CALM3P0DP25 149 aa17.16■□□□□ 0.34
RPUSD3-208ENST00000433972 ICAM3P32942 547 aa17.16■□□□□ 0.34
RPUSD3-208ENST00000433972 TAP1Q03518 808 aa17.16■□□□□ 0.34
RPUSD3-208ENST00000433972 METTL7BQ6UX53 244 aa17.16■□□□□ 0.34
RPUSD3-208ENST00000433972 MB21D2Q8IYB1 491 aaPredicted RBP17.16■□□□□ 0.34
RPUSD3-208ENST00000433972 GIMAP8Q8ND71 665 aaPredicted RBP17.16■□□□□ 0.34
RPUSD3-208ENST00000433972 SMARCC2Q8TAQ2 1214 aa17.16■□□□□ 0.34
RPUSD3-208ENST00000433972 TMEM87BQ96K49 555 aa17.16■□□□□ 0.34
RPUSD3-208ENST00000433972 INPP4AQ96PE3 977 aaPredicted RBP17.16■□□□□ 0.34
RPUSD3-208ENST00000433972 TUT1Q9H6E5 874 aaKnown RBP17.16■□□□□ 0.34
RPUSD3-208ENST00000433972 ZNF215Q9UL58 517 aaPredicted RBP17.16■□□□□ 0.34
RPUSD3-208ENST00000433972 COG5Q9UP83 839 aa17.16■□□□□ 0.34
RPUSD3-208ENST00000433972 RBM8AQ9Y5S9 174 aaKnown RBP17.16■□□□□ 0.34
RPUSD3-208ENST00000433972 MTCH2Q9Y6C9 303 aa17.16■□□□□ 0.34
RPUSD3-208ENST00000433972 NBNO60934 754 aa17.15■□□□□ 0.34
RPUSD3-208ENST00000433972 MCM5P33992 734 aa17.15■□□□□ 0.34
RPUSD3-208ENST00000433972 NFXL1Q6ZNB6 911 aa17.15■□□□□ 0.34
RPUSD3-208ENST00000433972 NLRX1Q86UT6 975 aa17.15■□□□□ 0.34
RPUSD3-208ENST00000433972 SERINC5Q86VE9 423 aa17.15■□□□□ 0.34
RPUSD3-208ENST00000433972 ZNF654Q8IZM8 581 aa17.15■□□□□ 0.34
RPUSD3-208ENST00000433972 IL31RAQ8NI17 732 aa17.15■□□□□ 0.34
RPUSD3-208ENST00000433972 IGDCC4Q8TDY8 1250 aa17.15■□□□□ 0.34
RPUSD3-208ENST00000433972 ADAMTS19Q8TE59 1207 aa17.15■□□□□ 0.34
RPUSD3-208ENST00000433972 CDHR1Q96JP9 859 aa17.15■□□□□ 0.34
RPUSD3-208ENST00000433972 UHRF1Q96T88 793 aaPredicted RBP17.15■□□□□ 0.34
RPUSD3-208ENST00000433972 RAD9AQ99638 391 aa17.15■□□□□ 0.34
RPUSD3-208ENST00000433972 CCDC69A6NI79 296 aa17.14■□□□□ 0.33
RPUSD3-208ENST00000433972 RSPH10B2B2RC85 870 aa17.14■□□□□ 0.33
RPUSD3-208ENST00000433972 PIK3CDO00329 1044 aa17.14■□□□□ 0.33
RPUSD3-208ENST00000433972 LGR5O75473 907 aa17.14■□□□□ 0.33
RPUSD3-208ENST00000433972 GJB5O95377 273 aa17.14■□□□□ 0.33
RPUSD3-208ENST00000433972 RSPH10BP0C881 870 aa17.14■□□□□ 0.33
RPUSD3-208ENST00000433972 THPOP40225 353 aa17.14■□□□□ 0.33
RPUSD3-208ENST00000433972 SP2Q02086 613 aa17.14■□□□□ 0.33
RPUSD3-208ENST00000433972 ZNF618Q5T7W0 954 aa17.14■□□□□ 0.33
RPUSD3-208ENST00000433972 ATP6V0A1Q93050 837 aa17.14■□□□□ 0.33
RPUSD3-208ENST00000433972 SENP7Q9BQF6 1050 aa17.14■□□□□ 0.33
RPUSD3-208ENST00000433972 ESYT1Q9BSJ8 1104 aa17.14■□□□□ 0.33
RPUSD3-208ENST00000433972 C16orf70Q9BSU1 422 aa17.14■□□□□ 0.33
RPUSD3-208ENST00000433972 CERS4Q9HA82 394 aa17.14■□□□□ 0.33
RPUSD3-208ENST00000433972 LMCD1Q9NZU5 365 aa17.14■□□□□ 0.33
RPUSD3-208ENST00000433972 KIAA1217Q5T5P2 1943 aa17.13■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms