RNA–Protein interactions for RNA: ENST00000433118.5

SMPD4-206, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 5

Gene SMPD4, Length 3,335 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-206ENST00000433118 STRIP1Q5VSL9 837 aa11.7□□□□□ -0.54
SMPD4-206ENST00000433118 SAMD1Q6SPF0 538 aaPredicted RBP11.7□□□□□ -0.54
SMPD4-206ENST00000433118 SRLQ86TD4 932 aa11.7□□□□□ -0.54
SMPD4-206ENST00000433118 BBXQ8WY36 941 aaPredicted RBP11.7□□□□□ -0.54
SMPD4-206ENST00000433118 RIN2Q8WYP3 895 aaPredicted RBP11.7□□□□□ -0.54
SMPD4-206ENST00000433118 DNAJC18Q9H819 358 aa11.7□□□□□ -0.54
SMPD4-206ENST00000433118 BIN2Q9UBW5 565 aaPredicted RBP11.7□□□□□ -0.54
SMPD4-206ENST00000433118 SEC63Q9UGP8 760 aaKnown RBP11.7□□□□□ -0.54
SMPD4-206ENST00000433118 RRP15Q9Y3B9 282 aaKnown RBP11.7□□□□□ -0.54
SMPD4-206ENST00000433118 SCN9AQ15858 1988 aa11.69□□□□□ -0.54
SMPD4-206ENST00000433118 TCP10L2B9ZVM9 353 aa11.69□□□□□ -0.54
SMPD4-206ENST00000433118 TRIM66O15016 1216 aa11.69□□□□□ -0.54
SMPD4-206ENST00000433118 PDHBP11177 359 aa11.69□□□□□ -0.54
SMPD4-206ENST00000433118 ERCC3P19447 782 aa11.69□□□□□ -0.54
SMPD4-206ENST00000433118 GNA11P29992 359 aa11.69□□□□□ -0.54
SMPD4-206ENST00000433118 TXKP42681 527 aa11.69□□□□□ -0.54
SMPD4-206ENST00000433118 BAG6P46379 1132 aa11.69□□□□□ -0.54
SMPD4-206ENST00000433118 HHIPL2Q6UWX4 724 aa11.69□□□□□ -0.54
SMPD4-206ENST00000433118 LARGE2Q8N3Y3 721 aa11.69□□□□□ -0.54
SMPD4-206ENST00000433118 ERGIC2Q96RQ1 377 aa11.69□□□□□ -0.54
SMPD4-206ENST00000433118 TRIM34Q9BYJ4 488 aa11.69□□□□□ -0.54
SMPD4-206ENST00000433118 TACC1O75410 805 aa11.69□□□□□ -0.54
SMPD4-206ENST00000433118 MYBL2P10244 700 aa11.69□□□□□ -0.54
SMPD4-206ENST00000433118 AARSP49588 968 aaKnown RBP eCLIP11.69□□□□□ -0.54
SMPD4-206ENST00000433118 SNAP25P60880 206 aa11.69□□□□□ -0.54
SMPD4-206ENST00000433118 FOXR1Q6PIV2 292 aa11.69□□□□□ -0.54
SMPD4-206ENST00000433118 KIAA0895Q8NCT3 520 aa11.69□□□□□ -0.54
SMPD4-206ENST00000433118 TRIM58Q8NG06 486 aa11.69□□□□□ -0.54
SMPD4-206ENST00000433118 TBCKQ8TEA7 893 aa11.69□□□□□ -0.54
SMPD4-206ENST00000433118 C7orf43Q8WVR3 580 aa11.69□□□□□ -0.54
SMPD4-206ENST00000433118 RRP36Q96EU6 259 aaKnown RBP11.69□□□□□ -0.54
SMPD4-206ENST00000433118 LZTS2Q9BRK4 669 aa11.69□□□□□ -0.54
SMPD4-206ENST00000433118 SELENOOQ9BVL4 669 aa11.69□□□□□ -0.54
SMPD4-206ENST00000433118 RASSF4Q9H2L5 321 aa11.69□□□□□ -0.54
SMPD4-206ENST00000433118 MMRN2Q9H8L6 949 aa11.69□□□□□ -0.54
SMPD4-206ENST00000433118 FAM198AQ9UFP1 575 aa11.69□□□□□ -0.54
SMPD4-206ENST00000433118 DDX60LQ5H9U9 1706 aaKnown RBP11.69□□□□□ -0.54
SMPD4-206ENST00000433118 CDK5RAP2Q96SN8 1893 aa11.68□□□□□ -0.54
SMPD4-206ENST00000433118 A0A1W2PQJ5 194 aa11.68□□□□□ -0.54
SMPD4-206ENST00000433118 ZNF263O14978 683 aa11.68□□□□□ -0.54
SMPD4-206ENST00000433118 AKR1B10O60218 316 aa11.68□□□□□ -0.54
SMPD4-206ENST00000433118 MATR3P43243 847 aaKnown RBP eCLIP11.68□□□□□ -0.54
SMPD4-206ENST00000433118 SV2BQ7L1I2 683 aa11.68□□□□□ -0.54
SMPD4-206ENST00000433118 SH3BP5LQ7L8J4 393 aa11.68□□□□□ -0.54
SMPD4-206ENST00000433118 DYMQ7RTS9 669 aa11.68□□□□□ -0.54
SMPD4-206ENST00000433118 POTEDQ86YR6 584 aa11.68□□□□□ -0.54
SMPD4-206ENST00000433118 CDK5RAP3Q96JB5 506 aa11.68□□□□□ -0.54
SMPD4-206ENST00000433118 TMEM260Q9NX78 707 aa11.68□□□□□ -0.54
SMPD4-206ENST00000433118 CAPN6Q9Y6Q1 641 aa11.68□□□□□ -0.54
SMPD4-206ENST00000433118 LTBP1Q14766 1721 aa11.68□□□□□ -0.54
SMPD4-206ENST00000433118 MYH10P35580 1976 aa11.68□□□□□ -0.54
SMPD4-206ENST00000433118 GGCXP38435 758 aa11.68□□□□□ -0.54
SMPD4-206ENST00000433118 FIGNQ5HY92 759 aa11.68□□□□□ -0.54
SMPD4-206ENST00000433118 TTLL6Q8N841 843 aa11.68□□□□□ -0.54
SMPD4-206ENST00000433118 ZDHHC15Q96MV8 337 aa11.68□□□□□ -0.54
SMPD4-206ENST00000433118 PURBQ96QR8 312 aaKnown RBP11.68□□□□□ -0.54
SMPD4-206ENST00000433118 PSMB7Q99436 277 aa11.68□□□□□ -0.54
SMPD4-206ENST00000433118 NDST4Q9H3R1 872 aa11.68□□□□□ -0.54
SMPD4-206ENST00000433118 SEMA6BQ9H3T3 888 aa11.68□□□□□ -0.54
SMPD4-206ENST00000433118 MLXIPQ9HAP2 919 aa11.68□□□□□ -0.54
SMPD4-206ENST00000433118 RSPH14Q9UHP6 348 aa11.68□□□□□ -0.54
SMPD4-206ENST00000433118 SUGT1Q9Y2Z0 365 aa11.68□□□□□ -0.54
SMPD4-206ENST00000433118 JRKLQ9Y4A0 524 aa11.68□□□□□ -0.54
SMPD4-206ENST00000433118 PCDHA13Q9Y5I0 950 aa11.68□□□□□ -0.54
SMPD4-206ENST00000433118 MOCS3O95396 460 aa11.68□□□□□ -0.54
SMPD4-206ENST00000433118 NT5C2P49902 561 aa11.68□□□□□ -0.54
SMPD4-206ENST00000433118 KIF11P52732 1056 aa11.68□□□□□ -0.54
SMPD4-206ENST00000433118 CDK17Q00537 523 aa11.68□□□□□ -0.54
SMPD4-206ENST00000433118 VWA3BQ502W6 1294 aa11.68□□□□□ -0.54
SMPD4-206ENST00000433118 CCNI2Q6ZMN8 369 aaPredicted RBP11.68□□□□□ -0.54
SMPD4-206ENST00000433118 REXO1Q8N1G1 1221 aaKnown RBP11.68□□□□□ -0.54
SMPD4-206ENST00000433118 SPZ1Q9BXG8 430 aa11.68□□□□□ -0.54
SMPD4-206ENST00000433118 ARHGAP20Q9P2F6 1191 aa11.68□□□□□ -0.54
SMPD4-206ENST00000433118 SNX12Q9UMY4 172 aa11.68□□□□□ -0.54
SMPD4-206ENST00000433118 PLAGL2Q9UPG8 496 aa11.68□□□□□ -0.54
SMPD4-206ENST00000433118 EPHB6O15197 1021 aa11.67□□□□□ -0.54
SMPD4-206ENST00000433118 TTLL1O95922 423 aa11.67□□□□□ -0.54
SMPD4-206ENST00000433118 TAL1P17542 331 aaPredicted RBP11.67□□□□□ -0.54
SMPD4-206ENST00000433118 SEPT2Q15019 361 aa11.67□□□□□ -0.54
SMPD4-206ENST00000433118 SKIDA1Q1XH10 827 aa11.67□□□□□ -0.54
SMPD4-206ENST00000433118 MMTAG2Q9BU76 263 aaKnown RBP11.67□□□□□ -0.54
SMPD4-206ENST00000433118 PLEKHA4Q9H4M7 779 aa11.67□□□□□ -0.54
SMPD4-206ENST00000433118 VEZTQ9HBM0 779 aa11.67□□□□□ -0.54
SMPD4-206ENST00000433118 LRRC37AA6NMS7 1700 aa11.67□□□□□ -0.54
SMPD4-206ENST00000433118 RPS6KA5O75582 802 aa11.67□□□□□ -0.54
SMPD4-206ENST00000433118 EIF4A3P38919 411 aaKnown RBP11.67□□□□□ -0.54
SMPD4-206ENST00000433118 CCDC181Q5TID7 509 aa11.67□□□□□ -0.54
SMPD4-206ENST00000433118 LRRC31Q6UY01 552 aa11.67□□□□□ -0.54
SMPD4-206ENST00000433118 RRAGAQ7L523 313 aa11.67□□□□□ -0.54
SMPD4-206ENST00000433118 ALS2CR12Q96Q35 445 aa11.67□□□□□ -0.54
SMPD4-206ENST00000433118 SH2D4AQ9H788 454 aa11.67□□□□□ -0.54
SMPD4-206ENST00000433118 FRMD4AQ9P2Q2 1039 aaPredicted RBP11.67□□□□□ -0.54
SMPD4-206ENST00000433118 GOLGA6BA6NDN3 693 aa11.66□□□□□ -0.54
SMPD4-206ENST00000433118 PRPF6O94906 941 aaKnown RBP11.66□□□□□ -0.54
SMPD4-206ENST00000433118 CXCR5P32302 372 aa11.66□□□□□ -0.54
SMPD4-206ENST00000433118 MRPS25P82663 173 aaKnown RBP11.66□□□□□ -0.54
SMPD4-206ENST00000433118 MAPK8IP2Q13387 824 aaPredicted RBP11.66□□□□□ -0.54
SMPD4-206ENST00000433118 CERKLQ49MI3 558 aaPredicted RBP11.66□□□□□ -0.54
SMPD4-206ENST00000433118 CENPPQ6IPU0 288 aa11.66□□□□□ -0.54
SMPD4-206ENST00000433118 CDAN1Q8IWY9 1227 aa11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms