RNA–Protein interactions for RNA: ENST00000432581.2

PRKDC-203, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 2

Gene PRKDC, Length 583 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-203ENST00000432581 TET1Q8NFU7 2136 aa17.29■□□□□ 0.36
PRKDC-203ENST00000432581 LAMA4Q16363 1823 aa17.29■□□□□ 0.36
PRKDC-203ENST00000432581 LCHNA4D1U4 455 aa17.29■□□□□ 0.36
PRKDC-203ENST00000432581 LPXNO60711 386 aa17.29■□□□□ 0.36
PRKDC-203ENST00000432581 RGS20O76081 388 aa17.29■□□□□ 0.36
PRKDC-203ENST00000432581 TGFB3P10600 412 aa17.29■□□□□ 0.36
PRKDC-203ENST00000432581 MYCLP12524 364 aaPredicted RBP17.29■□□□□ 0.36
PRKDC-203ENST00000432581 TRIM71Q2Q1W2 868 aaKnown RBP17.29■□□□□ 0.36
PRKDC-203ENST00000432581 CELF3Q5SZQ8 465 aaKnown RBP17.29■□□□□ 0.36
PRKDC-203ENST00000432581 MYSM1Q5VVJ2 828 aa17.29■□□□□ 0.36
PRKDC-203ENST00000432581 VSIG10LQ86VR7 867 aa17.29■□□□□ 0.36
PRKDC-203ENST00000432581 SPATA33Q96N06 139 aa17.29■□□□□ 0.36
PRKDC-203ENST00000432581 MAD2L2Q9UI95 211 aa17.29■□□□□ 0.36
PRKDC-203ENST00000432581 EMSYQ7Z589 1322 aa17.28■□□□□ 0.36
PRKDC-203ENST00000432581 PALM3A6NDB9 673 aaPredicted RBP17.28■□□□□ 0.36
PRKDC-203ENST00000432581 PPP1R11O60927 126 aaPredicted RBP17.28■□□□□ 0.36
PRKDC-203ENST00000432581 GGPS1O95749 300 aa17.28■□□□□ 0.36
PRKDC-203ENST00000432581 IGHDP01880 384 aa17.28■□□□□ 0.36
PRKDC-203ENST00000432581 CCND2P30279 289 aa17.28■□□□□ 0.36
PRKDC-203ENST00000432581 TRDNQ13061 729 aa17.28■□□□□ 0.36
PRKDC-203ENST00000432581 PGM5Q15124 567 aa17.28■□□□□ 0.36
PRKDC-203ENST00000432581 SEC23AQ15436 765 aa17.28■□□□□ 0.36
PRKDC-203ENST00000432581 ZNF618Q5T7W0 954 aa17.28■□□□□ 0.36
PRKDC-203ENST00000432581 TRAF7Q6Q0C0 670 aa17.28■□□□□ 0.36
PRKDC-203ENST00000432581 SPRED2Q7Z698 418 aa17.28■□□□□ 0.36
PRKDC-203ENST00000432581 TMCO2Q7Z6W1 182 aaPredicted RBP17.28■□□□□ 0.36
PRKDC-203ENST00000432581 TGS1Q96RS0 853 aaKnown RBP17.28■□□□□ 0.36
PRKDC-203ENST00000432581 GCOM1H8Y6P7 765 aaPredicted RBP17.27■□□□□ 0.36
PRKDC-203ENST00000432581 LGR5O75473 907 aa17.27■□□□□ 0.36
PRKDC-203ENST00000432581 POLR2MP0CAP2 368 aa17.27■□□□□ 0.36
PRKDC-203ENST00000432581 HOXA13P31271 388 aaPredicted RBP17.27■□□□□ 0.36
PRKDC-203ENST00000432581 ERVK-21P61565 698 aa17.27■□□□□ 0.36
PRKDC-203ENST00000432581 HSDL1Q3SXM5 330 aa17.27■□□□□ 0.36
PRKDC-203ENST00000432581 GDPD5Q8WTR4 605 aa17.27■□□□□ 0.36
PRKDC-203ENST00000432581 LINC01553A4QN01 128 aa17.26■□□□□ 0.35
PRKDC-203ENST00000432581 UBA1P22314 1058 aaKnown RBP17.26■□□□□ 0.35
PRKDC-203ENST00000432581 ZNF200P98182 395 aaPredicted RBP17.26■□□□□ 0.35
PRKDC-203ENST00000432581 MBTPS1Q14703 1052 aa17.26■□□□□ 0.35
PRKDC-203ENST00000432581 TCTN1Q2MV58 587 aa17.26■□□□□ 0.35
PRKDC-203ENST00000432581 SERINC5Q86VE9 423 aa17.26■□□□□ 0.35
PRKDC-203ENST00000432581 HOMER1Q86YM7 354 aa17.26■□□□□ 0.35
PRKDC-203ENST00000432581 WNT8BQ93098 351 aa17.26■□□□□ 0.35
PRKDC-203ENST00000432581 C16orf70Q9BSU1 422 aa17.26■□□□□ 0.35
PRKDC-203ENST00000432581 MLXIPQ9HAP2 919 aa17.26■□□□□ 0.35
PRKDC-203ENST00000432581 C17orf102A2RUQ5 167 aa17.25■□□□□ 0.35
PRKDC-203ENST00000432581 RSPH10B2B2RC85 870 aa17.25■□□□□ 0.35
PRKDC-203ENST00000432581 AMHP03971 560 aa17.25■□□□□ 0.35
PRKDC-203ENST00000432581 RSPH10BP0C881 870 aa17.25■□□□□ 0.35
PRKDC-203ENST00000432581 THPOP40225 353 aa17.25■□□□□ 0.35
PRKDC-203ENST00000432581 SP2Q02086 613 aa17.25■□□□□ 0.35
PRKDC-203ENST00000432581 GRM4Q14833 912 aa17.25■□□□□ 0.35
PRKDC-203ENST00000432581 CYB5R4Q7L1T6 521 aa17.25■□□□□ 0.35
PRKDC-203ENST00000432581 IL31RAQ8NI17 732 aa17.25■□□□□ 0.35
PRKDC-203ENST00000432581 RIOX1Q9H6W3 641 aa17.25■□□□□ 0.35
PRKDC-203ENST00000432581 SUGCTQ9HAC7 445 aa17.25■□□□□ 0.35
PRKDC-203ENST00000432581 RAPGEFL1Q9UHV5 662 aa17.25■□□□□ 0.35
PRKDC-203ENST00000432581 MTUS1Q9ULD2 1270 aa17.25■□□□□ 0.35
PRKDC-203ENST00000432581 INSL6Q9Y581 213 aa17.25■□□□□ 0.35
PRKDC-203ENST00000432581 KIAA1217Q5T5P2 1943 aa17.25■□□□□ 0.35
PRKDC-203ENST00000432581 ERICH2A1L162 156 aa17.24■□□□□ 0.35
PRKDC-203ENST00000432581 SORBS3O60504 671 aa17.24■□□□□ 0.35
PRKDC-203ENST00000432581 STAM2O75886 525 aa17.24■□□□□ 0.35
PRKDC-203ENST00000432581 HIC1Q14526 733 aa17.24■□□□□ 0.35
PRKDC-203ENST00000432581 GNPTABQ3T906 1256 aa17.24■□□□□ 0.35
PRKDC-203ENST00000432581 FAM117BQ6P1L5 589 aa17.24■□□□□ 0.35
PRKDC-203ENST00000432581 FCHSD1Q86WN1 690 aa17.24■□□□□ 0.35
PRKDC-203ENST00000432581 ATP6V0A1Q93050 837 aa17.24■□□□□ 0.35
PRKDC-203ENST00000432581 PIGSQ96S52 555 aa17.24■□□□□ 0.35
PRKDC-203ENST00000432581 U3KPZ7 1027 aaPredicted RBP17.24■□□□□ 0.35
PRKDC-203ENST00000432581 TRIP12Q14669 1992 aaPredicted RBP17.24■□□□□ 0.35
PRKDC-203ENST00000432581 PNMA6FA0A0J9YX94 578 aa17.23■□□□□ 0.35
PRKDC-203ENST00000432581 H3BRB1 525 aa17.23■□□□□ 0.35
PRKDC-203ENST00000432581 NOP56O00567 594 aaKnown RBP17.23■□□□□ 0.35
PRKDC-203ENST00000432581 IFIT3O14879 490 aaKnown RBP17.23■□□□□ 0.35
PRKDC-203ENST00000432581 CAND2O75155 1236 aa17.23■□□□□ 0.35
PRKDC-203ENST00000432581 HOXC8P31273 242 aa17.23■□□□□ 0.35
PRKDC-203ENST00000432581 SART3Q15020 963 aaKnown RBP17.23■□□□□ 0.35
PRKDC-203ENST00000432581 DBF4BQ8NFT6 615 aa17.23■□□□□ 0.35
PRKDC-203ENST00000432581 USP26Q9BXU7 913 aa17.23■□□□□ 0.35
PRKDC-203ENST00000432581 IL25Q9H293 177 aa17.23■□□□□ 0.35
PRKDC-203ENST00000432581 TUT1Q9H6E5 874 aaKnown RBP17.23■□□□□ 0.35
PRKDC-203ENST00000432581 REV3LO60673 3130 aa17.23■□□□□ 0.35
PRKDC-203ENST00000432581 LGALS2P05162 132 aa17.22■□□□□ 0.35
PRKDC-203ENST00000432581 SMIM10L2AP0DMW4 78 aa17.22■□□□□ 0.35
PRKDC-203ENST00000432581 SMIM10L2BP0DMW5 78 aa17.22■□□□□ 0.35
PRKDC-203ENST00000432581 GNAT1P11488 350 aa17.22■□□□□ 0.35
PRKDC-203ENST00000432581 ICAM3P32942 547 aa17.22■□□□□ 0.35
PRKDC-203ENST00000432581 PLA2G5P39877 138 aa17.22■□□□□ 0.35
PRKDC-203ENST00000432581 HTRA4P83105 476 aaPredicted RBP17.22■□□□□ 0.35
PRKDC-203ENST00000432581 MKRN4PQ13434 485 aaPredicted RBP17.22■□□□□ 0.35
PRKDC-203ENST00000432581 NEDD9Q14511 834 aa17.22■□□□□ 0.35
PRKDC-203ENST00000432581 SLC35G1Q2M3R5 365 aa17.22■□□□□ 0.35
PRKDC-203ENST00000432581 PLEKHG4Q58EX7 1191 aa17.22■□□□□ 0.35
PRKDC-203ENST00000432581 METTL7BQ6UX53 244 aa17.22■□□□□ 0.35
PRKDC-203ENST00000432581 LIN28BQ6ZN17 250 aaKnown RBP eCLIP17.22■□□□□ 0.351e-12■■■■■ 46.5
PRKDC-203ENST00000432581 MYOCDQ8IZQ8 938 aa17.22■□□□□ 0.35
PRKDC-203ENST00000432581 FBXO22Q8NEZ5 403 aa17.22■□□□□ 0.35
PRKDC-203ENST00000432581 RUFY2Q8WXA3 655 aa17.22■□□□□ 0.35
PRKDC-203ENST00000432581 GPKOWQ92917 476 aaPredicted RBP eCLIP17.22■□□□□ 0.35
PRKDC-203ENST00000432581 INPP4AQ96PE3 977 aaPredicted RBP17.22■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 188.8 ms